RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 DIRAS2Q96HU8 199 aa13.36□□□□□ -0.27
TPM4-206ENST00000587201 NEURL2Q9BR09 285 aa13.36□□□□□ -0.27
TPM4-206ENST00000587201 TM2D3Q9BRN9 247 aa13.36□□□□□ -0.27
TPM4-206ENST00000587201 SLC2A8Q9NY64 477 aa13.36□□□□□ -0.27
TPM4-206ENST00000587201 CCDC59Q9P031 241 aaKnown RBP13.36□□□□□ -0.27
TPM4-206ENST00000587201 COPZ2Q9P299 210 aa13.36□□□□□ -0.27
TPM4-206ENST00000587201 SELENOKQ9Y6D0 94 aa13.36□□□□□ -0.27
TPM4-206ENST00000587201 C3orf85A0A1B0GTC6 90 aa13.35□□□□□ -0.27
TPM4-206ENST00000587201 OR2T8A6NH00 312 aa13.35□□□□□ -0.27
TPM4-206ENST00000587201 RPL5P46777 297 aaKnown RBP13.35□□□□□ -0.27
TPM4-206ENST00000587201 TM4SF20Q53R12 229 aa13.35□□□□□ -0.27
TPM4-206ENST00000587201 ZNF57Q68EA5 555 aaPredicted RBP13.35□□□□□ -0.27
TPM4-206ENST00000587201 CCDC71LQ8N9Z2 235 aa13.35□□□□□ -0.27
TPM4-206ENST00000587201 SCARB1Q8WTV0 552 aa13.35□□□□□ -0.27
TPM4-206ENST00000587201 WDR89Q96FK6 387 aaPredicted RBP13.35□□□□□ -0.27
TPM4-206ENST00000587201 TP53RKQ96S44 253 aa13.35□□□□□ -0.27
TPM4-206ENST00000587201 C6orf62Q9GZU0 229 aaPredicted RBP13.35□□□□□ -0.27
TPM4-206ENST00000587201 PLEKHA3Q9HB20 300 aa13.35□□□□□ -0.27
TPM4-206ENST00000587201 C21orf62Q9NYP8 219 aa13.35□□□□□ -0.27
TPM4-206ENST00000587201 CD7P09564 240 aa13.34□□□□□ -0.27
TPM4-206ENST00000587201 AKR1C2P52895 323 aa13.34□□□□□ -0.27
TPM4-206ENST00000587201 HSPE1P61604 102 aaKnown RBP13.34□□□□□ -0.27
TPM4-206ENST00000587201 PRCDQ00LT1 54 aa13.34□□□□□ -0.27
TPM4-206ENST00000587201 MEF2DQ14814 521 aa13.34□□□□□ -0.27
TPM4-206ENST00000587201 TRIM16LQ309B1 348 aa13.34□□□□□ -0.27
TPM4-206ENST00000587201 FAAP20Q6NZ36 180 aa13.34□□□□□ -0.27
TPM4-206ENST00000587201 UBAC2Q8NBM4 344 aa13.34□□□□□ -0.27
TPM4-206ENST00000587201 OR13C8Q8NGS7 320 aa13.34□□□□□ -0.27
TPM4-206ENST00000587201 OR1P1Q8NH06 330 aa13.34□□□□□ -0.27
TPM4-206ENST00000587201 MARCH1Q8TCQ1 289 aa13.34□□□□□ -0.27
TPM4-206ENST00000587201 SMIM4Q8WVI0 70 aa13.34□□□□□ -0.27
TPM4-206ENST00000587201 BSCL2Q96G97 398 aaPredicted RBP13.34□□□□□ -0.27
TPM4-206ENST00000587201 ZNF436Q9C0F3 470 aaPredicted RBP13.34□□□□□ -0.27
TPM4-206ENST00000587201 RABL2AQ9UBK7 228 aaPredicted RBP13.34□□□□□ -0.27
TPM4-206ENST00000587201 MLXQ9UH92 298 aa13.34□□□□□ -0.27
TPM4-206ENST00000587201 RABL2BQ9UNT1 228 aa13.34□□□□□ -0.27
TPM4-206ENST00000587201 UFC1Q9Y3C8 167 aa13.34□□□□□ -0.27
TPM4-206ENST00000587201 DISC1C4P0D8 188 aa13.33□□□□□ -0.28
TPM4-206ENST00000587201 K7EIM0 57 aa13.33□□□□□ -0.28
TPM4-206ENST00000587201 ATG12O94817 140 aa13.33□□□□□ -0.28
TPM4-206ENST00000587201 CTSDP07339 412 aaPredicted RBP13.33□□□□□ -0.28
TPM4-206ENST00000587201 HAGHQ16775 308 aa13.33□□□□□ -0.28
TPM4-206ENST00000587201 IZUMO4Q1ZYL8 232 aa13.33□□□□□ -0.28
TPM4-206ENST00000587201 SP6Q3SY56 376 aa13.33□□□□□ -0.28
TPM4-206ENST00000587201 Q56UQ5 140 aa13.33□□□□□ -0.28
TPM4-206ENST00000587201 BTNL8Q6UX41 500 aa13.33□□□□□ -0.28
TPM4-206ENST00000587201 OR2C3Q8N628 320 aa13.33□□□□□ -0.28
TPM4-206ENST00000587201 MARC2Q969Z3 335 aa13.33□□□□□ -0.28
TPM4-206ENST00000587201 MISP3Q96FF7 219 aa13.33□□□□□ -0.28
TPM4-206ENST00000587201 ATP6V0BQ99437 205 aa13.33□□□□□ -0.28
TPM4-206ENST00000587201 MRPL27Q9P0M9 148 aaKnown RBP13.33□□□□□ -0.28
TPM4-206ENST00000587201 TENM3Q9P273 2699 aa13.33□□□□□ -0.28
TPM4-206ENST00000587201 H3BMQ9 156 aa13.32□□□□□ -0.28
TPM4-206ENST00000587201 CTDSPLO15194 276 aa13.32□□□□□ -0.28
TPM4-206ENST00000587201 IGKV1-5P01602 117 aa13.32□□□□□ -0.28
TPM4-206ENST00000587201 AKAIN1P0CW23 69 aa13.32□□□□□ -0.28
TPM4-206ENST00000587201 ELLP55199 621 aaPredicted RBP13.32□□□□□ -0.28
TPM4-206ENST00000587201 ERHP84090 104 aaKnown RBP13.32□□□□□ -0.28
TPM4-206ENST00000587201 SPINK9Q5DT21 86 aa13.32□□□□□ -0.28
TPM4-206ENST00000587201 SPSB3Q6PJ21 355 aa13.32□□□□□ -0.28
TPM4-206ENST00000587201 TMEM61Q8N0U2 210 aa13.32□□□□□ -0.28
TPM4-206ENST00000587201 DEFB125Q8N687 156 aa13.32□□□□□ -0.28
TPM4-206ENST00000587201 ISOC1Q96CN7 298 aa13.32□□□□□ -0.28
TPM4-206ENST00000587201 SPATA25Q9BR10 227 aa13.32□□□□□ -0.28
TPM4-206ENST00000587201 C14orf166Q9Y224 244 aaKnown RBP13.32□□□□□ -0.28
TPM4-206ENST00000587201 OR11H12B2RN74 326 aa13.31□□□□□ -0.28
TPM4-206ENST00000587201 F8W735 103 aaPredicted RBP13.31□□□□□ -0.28
TPM4-206ENST00000587201 C3orf84H3BNL1 204 aa13.31□□□□□ -0.28
TPM4-206ENST00000587201 SCAF4O95104 1147 aaKnown RBP13.31□□□□□ -0.28
TPM4-206ENST00000587201 C8orf88P0DMB2 117 aa13.31□□□□□ -0.28
TPM4-206ENST00000587201 SLC16A13Q7RTY0 426 aa13.31□□□□□ -0.28
TPM4-206ENST00000587201 TMEM190Q8WZ59 177 aa13.31□□□□□ -0.28
TPM4-206ENST00000587201 CHRDL1Q9BU40 450 aa13.31□□□□□ -0.28
TPM4-206ENST00000587201 PDCD10Q9BUL8 212 aa13.31□□□□□ -0.28
TPM4-206ENST00000587201 WFDC10AQ9H1F0 79 aa13.31□□□□□ -0.28
TPM4-206ENST00000587201 STAB2Q8WWQ8 2551 aa13.31□□□□□ -0.28
TPM4-206ENST00000587201 KMT2CQ8NEZ4 4911 aaKnown RBP13.3□□□□□ -0.28
TPM4-206ENST00000587201 A0A0B4J293 547 aa13.3□□□□□ -0.28
TPM4-206ENST00000587201 NDUFA4O00483 81 aa13.3□□□□□ -0.28
TPM4-206ENST00000587201 B3GALNT1O75752 331 aa13.3□□□□□ -0.28
TPM4-206ENST00000587201 UCP1P25874 307 aa13.3□□□□□ -0.28
TPM4-206ENST00000587201 RBPMS2Q6ZRY4 209 aaKnown RBP13.3□□□□□ -0.28
TPM4-206ENST00000587201 SLC35G3Q8N808 338 aa13.3□□□□□ -0.28
TPM4-206ENST00000587201 ZNF114Q8NC26 417 aa13.3□□□□□ -0.28
TPM4-206ENST00000587201 OR4C16Q8NGL9 310 aa13.3□□□□□ -0.28
TPM4-206ENST00000587201 RNASE11Q8TAA1 199 aaKnown RBP13.3□□□□□ -0.28
TPM4-206ENST00000587201 RRNAD1Q96FB5 475 aaKnown RBP13.3□□□□□ -0.28
TPM4-206ENST00000587201 C20orf24Q9BUV8 137 aa13.3□□□□□ -0.28
TPM4-206ENST00000587201 SLIRPQ9GZT3 109 aaKnown RBP13.3□□□□□ -0.28
TPM4-206ENST00000587201 SRD5A3Q9H8P0 318 aa13.3□□□□□ -0.28
TPM4-206ENST00000587201 GAR1Q9NY12 217 aaKnown RBP13.3□□□□□ -0.28
TPM4-206ENST00000587201 RSL24D1Q9UHA3 163 aaKnown RBP13.3□□□□□ -0.28
TPM4-206ENST00000587201 CEPT1Q9Y6K0 416 aa13.3□□□□□ -0.28
TPM4-206ENST00000587201 TEX13DA0A0J9YY54 714 aaPredicted RBP13.29□□□□□ -0.28
TPM4-206ENST00000587201 ST8SIA3O43173 380 aa13.29□□□□□ -0.28
TPM4-206ENST00000587201 MT-CO2P00403 227 aa13.29□□□□□ -0.28
TPM4-206ENST00000587201 IFNA17P01571 189 aa13.29□□□□□ -0.28
TPM4-206ENST00000587201 P0C879 139 aa13.29□□□□□ -0.28
TPM4-206ENST00000587201 ADMP35318 185 aa13.29□□□□□ -0.28
TPM4-206ENST00000587201 MFAP4P55083 255 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms