RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 SLC25A48Q6ZT89 311 aaKnown RBP10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 C16orf82Q7Z2V1 217 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 TMEM133Q9H2Q1 129 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 MANBALQ9NQG1 85 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 WDR83OSQ9Y284 106 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 PKD1L2Q7Z442 2459 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 DMXL2Q8TDJ6 3036 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 LOC105371242A0A075B767 164 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 IGHV3-35A0A0C4DH35 117 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 TEX50A0A1B0GTY4 177 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 LY86O95711 162 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 USF1P22415 310 aaPredicted RBP10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 TCL1AP56279 114 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 FAM3BP58499 235 aaPredicted RBP10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 ZNF90Q03938 601 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 ARSJQ5FYB0 599 aaPredicted RBP10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 C12orf57Q99622 126 aa10.18□□□□□ -0.78
SMARCA4-208ENST00000585799 LIPFP07098 398 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 MC5RP33032 325 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 ZNF726P1Q15940 193 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 OSR1Q8TAX0 266 aaPredicted RBP10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 SLC45A2Q9UMX9 530 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 NAV3Q8IVL0 2385 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 IGHV1-8P0DP01 117 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 HTR1DP28221 377 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 ERVFC1-1P60608 527 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 TIGITQ495A1 244 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 SLC16A13Q7RTY0 426 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 ODF3L1Q8IXM7 274 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 ZNF596Q8TC21 504 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 ZNF430Q9H8G1 570 aaPredicted RBP10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 KMT2EQ8IZD2 1858 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 PPP1R2P9O14990 202 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 LOXP28300 417 aaPredicted RBP10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 UQCRFS1P47985 274 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 C19orf35Q6ZS72 473 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 MIR17HGQ75NE6 70 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 GNB4Q9HAV0 340 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 NIT2Q9NQR4 276 aa10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 AMMECR1Q9Y4X0 333 aaPredicted RBP10.17□□□□□ -0.78
SMARCA4-208ENST00000585799 CXorf1O96002 111 aa10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 TRGC2P03986 189 aa10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 RANP62826 216 aaKnown RBP10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 C1orf229Q6ZS94 237 aaPredicted RBP10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 ST6GALNAC3Q8NDV1 305 aa10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 Q8TCH9 128 aa10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 TECRQ9NZ01 308 aaKnown RBP10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 BPIFB3P59826 476 aa10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 SPNS3Q6ZMD2 512 aa10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 SMDT1Q9H4I9 107 aa10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 MIOXQ9UGB7 285 aa10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 LRRK2Q5S007 2527 aa10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 MPDU1O75352 247 aa10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 CEACAM3P40198 252 aa10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 SLC35B1P78383 322 aa10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 ZNF295-AS1Q8N0V1 137 aa10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 NHLRC2Q8NBF2 726 aa10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 GGTLC1Q9BX51 225 aa10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 HCFC1P51610 2035 aa10.16□□□□□ -0.78
SMARCA4-208ENST00000585799 MMD2Q8IY49 270 aa10.15□□□□□ -0.78
SMARCA4-208ENST00000585799 OR5AU1Q8NGC0 362 aa10.15□□□□□ -0.78
SMARCA4-208ENST00000585799 MGST2Q99735 147 aa10.15□□□□□ -0.78
SMARCA4-208ENST00000585799 EPG5Q9HCE0 2579 aa10.15□□□□□ -0.78
SMARCA4-208ENST00000585799 H0YJW9 148 aa10.15□□□□□ -0.78
SMARCA4-208ENST00000585799 CNTFRP26992 372 aa10.15□□□□□ -0.78
SMARCA4-208ENST00000585799 PNRC1Q12796 327 aaPredicted RBP10.15□□□□□ -0.78
SMARCA4-208ENST00000585799 OR5B3Q8NH48 314 aa10.15□□□□□ -0.78
SMARCA4-208ENST00000585799 SEPSECSQ9HD40 501 aaKnown RBP10.15□□□□□ -0.78
SMARCA4-208ENST00000585799 TIMM9Q9Y5J7 89 aa10.15□□□□□ -0.78
SMARCA4-208ENST00000585799 IGHV2-26A0A0B4J1V2 119 aa10.15□□□□□ -0.79
SMARCA4-208ENST00000585799 A1L4Q6 167 aa10.15□□□□□ -0.79
SMARCA4-208ENST00000585799 KIR3DL3Q8N743 410 aa10.15□□□□□ -0.79
SMARCA4-208ENST00000585799 SEBOXQ9HB31 216 aaPredicted RBP10.15□□□□□ -0.79
SMARCA4-208ENST00000585799 TPSG1Q9NRR2 321 aa10.15□□□□□ -0.79
SMARCA4-208ENST00000585799 CRYBB3P26998 211 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 GCHFRP30047 84 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 UBE2G1P62253 170 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 RPL19P84098 196 aaKnown RBP10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 Q56UQ5 140 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 C10orf113Q5VZT2 155 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 MBD3L1Q8WWY6 194 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 TMUB1Q9BVT8 246 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 GSX1Q9H4S2 264 aaPredicted RBP10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 TNFRSF19Q9NS68 423 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 CBLN4Q9NTU7 201 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 POLQO75417 2590 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 IGHV3OR16-8A0A075B7F1 116 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 SCO2A0A1W2PP80 73 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 SLC25A5P05141 298 aaKnown RBP10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 C3orf36Q3SXR2 165 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 TEX36Q5VZQ5 186 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 CMTM2Q8TAZ6 248 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 TMEM68Q96MH6 324 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 DERL1Q9BUN8 251 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 TPPP3Q9BW30 176 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 SSBP3Q9BWW4 388 aaPredicted RBP10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 C11orf1Q9H5F2 150 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 TANC2Q9HCD6 1990 aa10.14□□□□□ -0.79
SMARCA4-208ENST00000585799 COLCA2A8K830 154 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms