RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 ATG12O94817 140 aa9.4□□□□□ -0.91
SS18-225ENST00000585121 FOLR2P14207 255 aa9.4□□□□□ -0.91
SS18-225ENST00000585121 TAS2R19P59542 299 aa9.4□□□□□ -0.91
SS18-225ENST00000585121 SSBP1Q04837 148 aaKnown RBP9.4□□□□□ -0.91
SS18-225ENST00000585121 TRIM16LQ309B1 348 aa9.4□□□□□ -0.91
SS18-225ENST00000585121 PLET1Q6UQ28 207 aa9.4□□□□□ -0.91
SS18-225ENST00000585121 Q8N1Y9 231 aa9.4□□□□□ -0.91
SS18-225ENST00000585121 TMEM229BQ8NBD8 167 aa9.4□□□□□ -0.91
SS18-225ENST00000585121 ZFAND1Q8TCF1 268 aa9.4□□□□□ -0.91
SS18-225ENST00000585121 VN1R17PQ8TDU5 208 aa9.4□□□□□ -0.91
SS18-225ENST00000585121 DEDD2Q8WXF8 326 aa9.4□□□□□ -0.91
SS18-225ENST00000585121 SLC2A8Q9NY64 477 aa9.4□□□□□ -0.91
SS18-225ENST00000585121 DMRT1Q9Y5R6 373 aa9.4□□□□□ -0.91
SS18-225ENST00000585121 MFSD2BA6NFX1 497 aa9.39□□□□□ -0.91
SS18-225ENST00000585121 C15orf61A6NNL5 157 aa9.39□□□□□ -0.91
SS18-225ENST00000585121 A8MZ25 164 aa9.39□□□□□ -0.91
SS18-225ENST00000585121 GPR183P32249 361 aa9.39□□□□□ -0.91
SS18-225ENST00000585121 RND3P61587 244 aa9.39□□□□□ -0.91
SS18-225ENST00000585121 CD300EQ496F6 205 aaPredicted RBP9.39□□□□□ -0.91
SS18-225ENST00000585121 Q6ZNX1 250 aa9.39□□□□□ -0.91
SS18-225ENST00000585121 CENPSQ8N2Z9 138 aa9.39□□□□□ -0.91
SS18-225ENST00000585121 CCDC71LQ8N9Z2 235 aa9.39□□□□□ -0.91
SS18-225ENST00000585121 ZNF502Q8TBZ5 544 aa9.39□□□□□ -0.91
SS18-225ENST00000585121 TRIM63Q969Q1 353 aa9.39□□□□□ -0.91
SS18-225ENST00000585121 C7orf50Q9BRJ6 194 aaKnown RBP9.39□□□□□ -0.91
SS18-225ENST00000585121 TMEM14BQ9NUH8 114 aa9.39□□□□□ -0.91
SS18-225ENST00000585121 COPZ2Q9P299 210 aa9.39□□□□□ -0.91
SS18-225ENST00000585121 TBC1D24Q9ULP9 559 aa9.39□□□□□ -0.91
SS18-225ENST00000585121 F11RQ9Y624 299 aaKnown RBP9.39□□□□□ -0.91
SS18-225ENST00000585121 PLA2G10O15496 165 aa9.38□□□□□ -0.91
SS18-225ENST00000585121 RAB3DO95716 219 aa9.38□□□□□ -0.91
SS18-225ENST00000585121 PIGPP57054 158 aa9.38□□□□□ -0.91
SS18-225ENST00000585121 AP3S2P59780 193 aa9.38□□□□□ -0.91
SS18-225ENST00000585121 WT1-ASQ06250 92 aa9.38□□□□□ -0.91
SS18-225ENST00000585121 GUCA2BQ16661 112 aa9.38□□□□□ -0.91
SS18-225ENST00000585121 DEFB114Q30KQ6 69 aa9.38□□□□□ -0.91
SS18-225ENST00000585121 SCGB2B2Q4G0G5 96 aa9.38□□□□□ -0.91
SS18-225ENST00000585121 ZNF57Q68EA5 555 aaPredicted RBP9.38□□□□□ -0.91
SS18-225ENST00000585121 STEAP1BQ6NZ63 245 aa9.38□□□□□ -0.91
SS18-225ENST00000585121 MZT2BQ6NZ67 158 aa9.38□□□□□ -0.91
SS18-225ENST00000585121 HUWE1Q7Z6Z7 4374 aaKnown RBP9.38□□□□□ -0.91
SS18-225ENST00000585121 TOMM5Q8N4H5 51 aa9.38□□□□□ -0.91
SS18-225ENST00000585121 TERB2Q8NHR7 220 aa9.38□□□□□ -0.91
SS18-225ENST00000585121 SEC22AQ96IW7 307 aa9.38□□□□□ -0.91
SS18-225ENST00000585121 RCHY1Q96PM5 261 aa9.38□□□□□ -0.91
SS18-225ENST00000585121 ZC4H2Q9NQZ6 224 aa9.38□□□□□ -0.91
SS18-225ENST00000585121 STAB2Q8WWQ8 2551 aa9.37□□□□□ -0.91
SS18-225ENST00000585121 IZUMO1RA6ND01 250 aa9.37□□□□□ -0.91
SS18-225ENST00000585121 CENPXA8MT69 81 aa9.37□□□□□ -0.91
SS18-225ENST00000585121 CD74P04233 296 aa9.37□□□□□ -0.91
SS18-225ENST00000585121 CBLN1P23435 193 aa9.37□□□□□ -0.91
SS18-225ENST00000585121 MEF2DQ14814 521 aa9.37□□□□□ -0.91
SS18-225ENST00000585121 LHFPL1Q86WI0 220 aa9.37□□□□□ -0.91
SS18-225ENST00000585121 MARC2Q969Z3 335 aa9.37□□□□□ -0.91
SS18-225ENST00000585121 MRGPRFQ96AM1 343 aa9.37□□□□□ -0.91
SS18-225ENST00000585121 BSCL2Q96G97 398 aaPredicted RBP9.37□□□□□ -0.91
SS18-225ENST00000585121 ATP6V0BQ99437 205 aa9.37□□□□□ -0.91
SS18-225ENST00000585121 C19orf73Q9NVV2 129 aa9.37□□□□□ -0.91
SS18-225ENST00000585121 UFC1Q9Y3C8 167 aa9.37□□□□□ -0.91
SS18-225ENST00000585121 C3orf85A0A1B0GTC6 90 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 A8MWP6 167 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 DISC1C4P0D8 188 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 LYRM1O43325 122 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 TGOLN2O43493 480 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 PI3P19957 117 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 AKR1C2P52895 323 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 CD81P60033 236 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 HSPE1P61604 102 aaKnown RBP9.36□□□□□ -0.91
SS18-225ENST00000585121 ERHP84090 104 aaKnown RBP9.36□□□□□ -0.91
SS18-225ENST00000585121 SPSB3Q6PJ21 355 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 ADAMTSL5Q6ZMM2 481 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 UXS1Q8NBZ7 420 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 DUSP18Q8NEJ0 188 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 OR1P1Q8NH06 330 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 NEURL2Q9BR09 285 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 GAR1Q9NY12 217 aaKnown RBP9.36□□□□□ -0.91
SS18-225ENST00000585121 C21orf62Q9NYP8 219 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 C14orf166Q9Y224 244 aaKnown RBP9.36□□□□□ -0.91
SS18-225ENST00000585121 IGHV3-21A0A0B4J1V1 117 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 ANKRD20A5PA0PJZ0 165 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 NAP1L6A6NFF2 107 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 OR2T8A6NH00 312 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 B3GALNT1O75752 331 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 IGKV1-39P01597 117 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 IGKV1D-39P04432 117 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 ELLP55199 621 aaPredicted RBP9.36□□□□□ -0.91
SS18-225ENST00000585121 Q56UQ5 140 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 SLC16A13Q7RTY0 426 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 UBAC2Q8NBM4 344 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 OR4D10Q8NGI6 311 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 RNASE11Q8TAA1 199 aaKnown RBP9.36□□□□□ -0.91
SS18-225ENST00000585121 RRNAD1Q96FB5 475 aaKnown RBP9.36□□□□□ -0.91
SS18-225ENST00000585121 PDCD10Q9BUL8 212 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 PLEKHA3Q9HB20 300 aa9.36□□□□□ -0.91
SS18-225ENST00000585121 IGHV3-35A0A0C4DH35 117 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 LINC00854A0A1B0GVQ3 168 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 TMEM213A2RRL7 107 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 DBX1A6NMT0 343 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 ZNF785A8K8V0 405 aa9.35□□□□□ -0.91
SS18-225ENST00000585121 C3orf84H3BNL1 204 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms