RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 IGKV1D-8A0A087WSZ0 117 aa13.41□□□□□ -0.26
TOP3A-220ENST00000585031 TRBV9A0A0B4J1U6 114 aa13.41□□□□□ -0.26
TOP3A-220ENST00000585031 TRDCB7Z8K6 153 aa13.41□□□□□ -0.26
TOP3A-220ENST00000585031 ITGB1BP1O14713 200 aa13.41□□□□□ -0.26
TOP3A-220ENST00000585031 OR2C1O95371 312 aa13.41□□□□□ -0.26
TOP3A-220ENST00000585031 BMI1P35226 326 aa13.41□□□□□ -0.26
TOP3A-220ENST00000585031 CEACAM6P40199 344 aa13.41□□□□□ -0.26
TOP3A-220ENST00000585031 PDPNQ86YL7 162 aa13.41□□□□□ -0.26
TOP3A-220ENST00000585031 OR52B4Q8NGK2 314 aa13.41□□□□□ -0.26
TOP3A-220ENST00000585031 ZFAND1Q8TCF1 268 aa13.41□□□□□ -0.26
TOP3A-220ENST00000585031 ZNF2Q9BSG1 426 aaPredicted RBP13.41□□□□□ -0.26
TOP3A-220ENST00000585031 GPR132Q9UNW8 380 aa13.41□□□□□ -0.26
TOP3A-220ENST00000585031 TP53TG1Q9Y2A0 90 aa13.41□□□□□ -0.26
TOP3A-220ENST00000585031 FABP7O15540 132 aa13.4□□□□□ -0.26
TOP3A-220ENST00000585031 SCAF4O95104 1147 aaKnown RBP13.4□□□□□ -0.26
TOP3A-220ENST00000585031 CBLN1P23435 193 aa13.4□□□□□ -0.26
TOP3A-220ENST00000585031 HERV-K104P61576 105 aa13.4□□□□□ -0.26
TOP3A-220ENST00000585031 TM4SF20Q53R12 229 aa13.4□□□□□ -0.26
TOP3A-220ENST00000585031 DHRS11Q6UWP2 260 aa13.4□□□□□ -0.26
TOP3A-220ENST00000585031 LINC00336Q6ZUF6 198 aa13.4□□□□□ -0.26
TOP3A-220ENST00000585031 C12orf45Q8N5I9 185 aaPredicted RBP13.4□□□□□ -0.26
TOP3A-220ENST00000585031 OR11H7Q8NGC8 314 aa13.4□□□□□ -0.26
TOP3A-220ENST00000585031 ASB13Q8WXK3 278 aa13.4□□□□□ -0.26
TOP3A-220ENST00000585031 MRGPRFQ96AM1 343 aa13.4□□□□□ -0.26
TOP3A-220ENST00000585031 FYTTD1Q96QD9 318 aaKnown RBP13.4□□□□□ -0.26
TOP3A-220ENST00000585031 DIRAS3O95661 229 aa13.39□□□□□ -0.27
TOP3A-220ENST00000585031 C1QBP02746 253 aa13.39□□□□□ -0.27
TOP3A-220ENST00000585031 OR9G9P0C7N8 305 aa13.39□□□□□ -0.27
TOP3A-220ENST00000585031 GSTT2P0CG29 244 aa13.39□□□□□ -0.27
TOP3A-220ENST00000585031 HLA-DRB3P79483 266 aa13.39□□□□□ -0.27
TOP3A-220ENST00000585031 ATP5G2Q06055 141 aa13.39□□□□□ -0.27
TOP3A-220ENST00000585031 DHRS2Q13268 280 aa13.39□□□□□ -0.27
TOP3A-220ENST00000585031 TMEM128Q5BJH2 165 aa13.39□□□□□ -0.27
TOP3A-220ENST00000585031 AADACL3Q5VUY0 350 aa13.39□□□□□ -0.27
TOP3A-220ENST00000585031 C19orf35Q6ZS72 473 aa13.39□□□□□ -0.27
TOP3A-220ENST00000585031 Q6ZWC4 215 aa13.39□□□□□ -0.27
TOP3A-220ENST00000585031 OR4A4PQ8NGN8 299 aa13.39□□□□□ -0.27
TOP3A-220ENST00000585031 ZNF436Q9C0F3 470 aaPredicted RBP13.39□□□□□ -0.27
TOP3A-220ENST00000585031 SLC35D1Q9NTN3 355 aa13.39□□□□□ -0.27
TOP3A-220ENST00000585031 TMEM213A2RRL7 107 aa13.38□□□□□ -0.27
TOP3A-220ENST00000585031 CTSDP07339 412 aaPredicted RBP13.38□□□□□ -0.27
TOP3A-220ENST00000585031 GIPP09681 153 aaPredicted RBP13.38□□□□□ -0.27
TOP3A-220ENST00000585031 AKR1C4P17516 323 aa13.38□□□□□ -0.27
TOP3A-220ENST00000585031 VAMP1P23763 118 aa13.38□□□□□ -0.27
TOP3A-220ENST00000585031 ZBTB25P24278 435 aa13.38□□□□□ -0.27
TOP3A-220ENST00000585031 LPCAT3Q6P1A2 487 aa13.38□□□□□ -0.27
TOP3A-220ENST00000585031 NOXA1Q86UR1 476 aa13.38□□□□□ -0.27
TOP3A-220ENST00000585031 RNF183Q96D59 192 aa13.38□□□□□ -0.27
TOP3A-220ENST00000585031 C5orf30Q96GV9 206 aa13.38□□□□□ -0.27
TOP3A-220ENST00000585031 PHB2Q99623 299 aa13.38□□□□□ -0.27
TOP3A-220ENST00000585031 IGKV1-6A0A0C4DH72 117 aa13.37□□□□□ -0.27
TOP3A-220ENST00000585031 C9orf170A2RU37 121 aa13.37□□□□□ -0.27
TOP3A-220ENST00000585031 FAM223BA6NKX1 122 aa13.37□□□□□ -0.27
TOP3A-220ENST00000585031 M0R1X1 148 aa13.37□□□□□ -0.27
TOP3A-220ENST00000585031 LGALS9O00182 355 aa13.37□□□□□ -0.27
TOP3A-220ENST00000585031 APOA2P02652 100 aa13.37□□□□□ -0.27
TOP3A-220ENST00000585031 SCTP09683 121 aa13.37□□□□□ -0.27
TOP3A-220ENST00000585031 FCGR2CP31995 323 aa13.37□□□□□ -0.27
TOP3A-220ENST00000585031 UCP3P55916 312 aa13.37□□□□□ -0.27
TOP3A-220ENST00000585031 RAP2BP61225 183 aa13.37□□□□□ -0.27
TOP3A-220ENST00000585031 PPP1R1AQ13522 171 aa13.37□□□□□ -0.27
TOP3A-220ENST00000585031 FAM223AQ8IWN6 122 aa13.37□□□□□ -0.27
TOP3A-220ENST00000585031 UXS1Q8NBZ7 420 aa13.37□□□□□ -0.27
TOP3A-220ENST00000585031 MOB3AQ96BX8 217 aa13.37□□□□□ -0.27
TOP3A-220ENST00000585031 OR2J3O76001 311 aa13.36□□□□□ -0.27
TOP3A-220ENST00000585031 CXCL3P19876 107 aa13.36□□□□□ -0.27
TOP3A-220ENST00000585031 NANOS2P60321 138 aaKnown RBP13.36□□□□□ -0.27
TOP3A-220ENST00000585031 DHODHQ02127 395 aa13.36□□□□□ -0.27
TOP3A-220ENST00000585031 SLC38A6Q8IZM9 456 aa13.36□□□□□ -0.27
TOP3A-220ENST00000585031 CCDC71LQ8N9Z2 235 aa13.36□□□□□ -0.27
TOP3A-220ENST00000585031 COQ8AQ8NI60 647 aa13.36□□□□□ -0.27
TOP3A-220ENST00000585031 SRSF12Q8WXF0 261 aaKnown RBP13.36□□□□□ -0.27
TOP3A-220ENST00000585031 ZNF486Q96H40 463 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-220ENST00000585031 HYLS1Q96M11 299 aa13.36□□□□□ -0.27
TOP3A-220ENST00000585031 HARBI1Q96MB7 349 aa13.36□□□□□ -0.27
TOP3A-220ENST00000585031 CABLES2Q9BTV7 478 aa13.36□□□□□ -0.27
TOP3A-220ENST00000585031 FXYD6Q9H0Q3 95 aa13.36□□□□□ -0.27
TOP3A-220ENST00000585031 C5orf66Q9H5L9 145 aa13.36□□□□□ -0.27
TOP3A-220ENST00000585031 HERC1Q15751 4861 aa13.36□□□□□ -0.27
TOP3A-220ENST00000585031 A0A0B4J2A0 478 aa13.35□□□□□ -0.27
TOP3A-220ENST00000585031 GOSR2O14653 212 aa13.35□□□□□ -0.27
TOP3A-220ENST00000585031 BET1O15155 118 aa13.35□□□□□ -0.27
TOP3A-220ENST00000585031 SLC22A5O76082 557 aa13.35□□□□□ -0.27
TOP3A-220ENST00000585031 SFT2D2O95562 160 aa13.35□□□□□ -0.27
TOP3A-220ENST00000585031 IGHV3-23P01764 117 aa13.35□□□□□ -0.27
TOP3A-220ENST00000585031 FXYD4P59646 89 aa13.35□□□□□ -0.27
TOP3A-220ENST00000585031 TNXAQ16473 311 aa13.35□□□□□ -0.27
TOP3A-220ENST00000585031 PRSS8Q16651 343 aa13.35□□□□□ -0.27
TOP3A-220ENST00000585031 C15orf32Q32M92 178 aa13.35□□□□□ -0.27
TOP3A-220ENST00000585031 BTNL8Q6UX41 500 aa13.35□□□□□ -0.27
TOP3A-220ENST00000585031 MITD1Q8WV92 249 aa13.35□□□□□ -0.27
TOP3A-220ENST00000585031 EDARADDQ8WWZ3 215 aa13.35□□□□□ -0.27
TOP3A-220ENST00000585031 RTBDNQ9BSG5 229 aaPredicted RBP13.35□□□□□ -0.27
TOP3A-220ENST00000585031 UBQLN2Q9UHD9 624 aa13.35□□□□□ -0.27
TOP3A-220ENST00000585031 SHPKQ9UHJ6 478 aa13.35□□□□□ -0.27
TOP3A-220ENST00000585031 S4R3C0 116 aa13.35□□□□□ -0.27
TOP3A-220ENST00000585031 GGCTO75223 188 aaKnown RBP13.34□□□□□ -0.27
TOP3A-220ENST00000585031 TUSC2O75896 110 aa13.34□□□□□ -0.27
TOP3A-220ENST00000585031 S1PR2O95136 353 aa13.34□□□□□ -0.27
TOP3A-220ENST00000585031 PPYP01298 95 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms