RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 SPIN2AQ99865 258 aa9.14□□□□□ -0.95
TOP3A-215ENST00000583328 SPIN2BQ9BPZ2 258 aa9.14□□□□□ -0.95
TOP3A-215ENST00000583328 CCDC32Q9BV29 185 aa9.14□□□□□ -0.95
TOP3A-215ENST00000583328 WDR12Q9GZL7 423 aaKnown RBP9.14□□□□□ -0.95
TOP3A-215ENST00000583328 SCP2D1Q9UJQ7 156 aa9.14□□□□□ -0.95
TOP3A-215ENST00000583328 FBXL7Q9UJT9 491 aa9.14□□□□□ -0.95
TOP3A-215ENST00000583328 PRELID3BQ9Y3B1 194 aa9.14□□□□□ -0.95
TOP3A-215ENST00000583328 RYR1P21817 5038 aa9.14□□□□□ -0.95
TOP3A-215ENST00000583328 KIAA1109Q2LD37 5005 aa9.14□□□□□ -0.95
TOP3A-215ENST00000583328 TRAV25A0A0B4J276 109 aa9.13□□□□□ -0.95
TOP3A-215ENST00000583328 TNFSF12O43508 249 aa9.13□□□□□ -0.95
TOP3A-215ENST00000583328 CRYZL1O95825 349 aa9.13□□□□□ -0.95
TOP3A-215ENST00000583328 PGAM2P15259 253 aa9.13□□□□□ -0.95
TOP3A-215ENST00000583328 S100GP29377 79 aa9.13□□□□□ -0.95
TOP3A-215ENST00000583328 RPL30P62888 115 aaKnown RBP9.13□□□□□ -0.95
TOP3A-215ENST00000583328 OR4A47Q6IF82 309 aa9.13□□□□□ -0.95
TOP3A-215ENST00000583328 CLEC19AQ6UXS0 136 aa9.13□□□□□ -0.95
TOP3A-215ENST00000583328 OR2C3Q8N628 320 aa9.13□□□□□ -0.95
TOP3A-215ENST00000583328 TCTEX1D2Q8WW35 142 aa9.13□□□□□ -0.95
TOP3A-215ENST00000583328 ZNF486Q96H40 463 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-215ENST00000583328 ZNF430Q9H8G1 570 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-215ENST00000583328 HRASLSQ9HDD0 168 aa9.13□□□□□ -0.95
TOP3A-215ENST00000583328 MCUBQ9NWR8 336 aa9.13□□□□□ -0.95
TOP3A-215ENST00000583328 UBQLN2Q9UHD9 624 aa9.13□□□□□ -0.95
TOP3A-215ENST00000583328 CREBL2O60519 120 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-215ENST00000583328 FCGR3BO75015 233 aa9.12□□□□□ -0.95
TOP3A-215ENST00000583328 IFNA4P05014 189 aa9.12□□□□□ -0.95
TOP3A-215ENST00000583328 PRR20EP86478 221 aa9.12□□□□□ -0.95
TOP3A-215ENST00000583328 PRR20CP86479 221 aa9.12□□□□□ -0.95
TOP3A-215ENST00000583328 PRR20DP86480 221 aa9.12□□□□□ -0.95
TOP3A-215ENST00000583328 PRR20BP86481 221 aa9.12□□□□□ -0.95
TOP3A-215ENST00000583328 PRR20AP86496 221 aa9.12□□□□□ -0.95
TOP3A-215ENST00000583328 SURF2Q15527 256 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-215ENST00000583328 OR4S2Q8NH73 311 aa9.12□□□□□ -0.95
TOP3A-215ENST00000583328 ZFAND1Q8TCF1 268 aa9.12□□□□□ -0.95
TOP3A-215ENST00000583328 MARCH1Q8TCQ1 289 aa9.12□□□□□ -0.95
TOP3A-215ENST00000583328 MRGPRFQ96AM1 343 aa9.12□□□□□ -0.95
TOP3A-215ENST00000583328 GPHA2Q96T91 129 aa9.12□□□□□ -0.95
TOP3A-215ENST00000583328 C7orf50Q9BRJ6 194 aaKnown RBP9.12□□□□□ -0.95
TOP3A-215ENST00000583328 SLC2A9Q9NRM0 540 aa9.12□□□□□ -0.95
TOP3A-215ENST00000583328 S4R3C0 116 aa9.12□□□□□ -0.95
TOP3A-215ENST00000583328 KIR2DL5BA0A0G2JN68 375 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 KIR2DL5BA0A0G2JPC4 375 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 NAP1L6A6NFF2 107 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 HMX3A6NHT5 357 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 RBFOX2O43251 390 aaKnown RBP eCLIP9.11□□□□□ -0.95
TOP3A-215ENST00000583328 PGLYRP1O75594 196 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-215ENST00000583328 RLN1P04808 185 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 CTSDP07339 412 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-215ENST00000583328 RPL35AP18077 110 aaKnown RBP9.11□□□□□ -0.95
TOP3A-215ENST00000583328 RND3P61587 244 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 ZNF585BQ52M93 769 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 PHLDA2Q53GA4 152 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 OR2B11Q5JQS5 317 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 C10orf55Q5SWW7 151 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 MMD2Q8IY49 270 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 SPAG16Q8N0X2 631 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 KIR2DL5AQ8N109 375 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 OR13C8Q8NGS7 320 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 OR51H1Q8NH63 302 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 KIR2DL5BQ8NHK3 375 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 OSR1Q8TAX0 266 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-215ENST00000583328 MARC2Q969Z3 335 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 EEF1AKMT3Q96AZ1 226 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 SCGB3A2Q96PL1 93 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 FBXL17Q9UF56 701 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 C14orf166Q9Y224 244 aaKnown RBP9.11□□□□□ -0.95
TOP3A-215ENST00000583328 ZNF257Q9Y2Q1 563 aa9.11□□□□□ -0.95
TOP3A-215ENST00000583328 CENPXA8MT69 81 aa9.1□□□□□ -0.95
TOP3A-215ENST00000583328 A8MWP6 167 aa9.1□□□□□ -0.95
TOP3A-215ENST00000583328 SAA1P0DJI8 122 aaPredicted RBP9.1□□□□□ -0.95
TOP3A-215ENST00000583328 F2RP25116 425 aa9.1□□□□□ -0.95
TOP3A-215ENST00000583328 PIGPP57054 158 aa9.1□□□□□ -0.95
TOP3A-215ENST00000583328 BRWD1-AS2P59051 145 aa9.1□□□□□ -0.95
TOP3A-215ENST00000583328 NANOS2P60321 138 aaKnown RBP9.1□□□□□ -0.95
TOP3A-215ENST00000583328 C19orf35Q6ZS72 473 aa9.1□□□□□ -0.95
TOP3A-215ENST00000583328 TBC1D26Q86UD7 250 aa9.1□□□□□ -0.95
TOP3A-215ENST00000583328 CCDC71LQ8N9Z2 235 aa9.1□□□□□ -0.95
TOP3A-215ENST00000583328 CD300LFQ8TDQ1 290 aa9.1□□□□□ -0.95
TOP3A-215ENST00000583328 CCDC140Q96MF4 163 aa9.1□□□□□ -0.95
TOP3A-215ENST00000583328 MRPL27Q9P0M9 148 aaKnown RBP9.1□□□□□ -0.95
TOP3A-215ENST00000583328 COPZ2Q9P299 210 aa9.1□□□□□ -0.95
TOP3A-215ENST00000583328 GPR132Q9UNW8 380 aa9.1□□□□□ -0.95
TOP3A-215ENST00000583328 VPS13DQ5THJ4 4388 aa9.09□□□□□ -0.95
TOP3A-215ENST00000583328 NPIPB5A8MRT5 1133 aa9.09□□□□□ -0.95
TOP3A-215ENST00000583328 C8orf88P0DMB2 117 aa9.09□□□□□ -0.95
TOP3A-215ENST00000583328 CTRB1P17538 263 aa9.09□□□□□ -0.95
TOP3A-215ENST00000583328 PI3P19957 117 aa9.09□□□□□ -0.95
TOP3A-215ENST00000583328 RBMS2Q15434 407 aaKnown RBP9.09□□□□□ -0.95
TOP3A-215ENST00000583328 CTRB2Q6GPI1 263 aa9.09□□□□□ -0.95
TOP3A-215ENST00000583328 C11orf45Q8TAV5 145 aa9.09□□□□□ -0.95
TOP3A-215ENST00000583328 FANCD2OSQ96PS1 177 aa9.09□□□□□ -0.95
TOP3A-215ENST00000583328 FYTTD1Q96QD9 318 aaKnown RBP9.09□□□□□ -0.95
TOP3A-215ENST00000583328 SPAG8Q99932 426 aaPredicted RBP9.09□□□□□ -0.95
TOP3A-215ENST00000583328 SLC25A21Q9BQT8 299 aaPredicted RBP9.09□□□□□ -0.95
TOP3A-215ENST00000583328 MFFQ9GZY8 342 aa9.09□□□□□ -0.95
TOP3A-215ENST00000583328 C5orf66Q9H5L9 145 aa9.09□□□□□ -0.95
TOP3A-215ENST00000583328 FAM212BQ9NTI7 297 aaPredicted RBP9.09□□□□□ -0.95
TOP3A-215ENST00000583328 LINC00854A0A1B0GVQ3 168 aa9.08□□□□□ -0.96
TOP3A-215ENST00000583328 TEX22C9J3V5 150 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms