RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SPCS3P61009 180 aa1.58□□□□□ -2.16
SMARCE1-219ENST00000583294 CCL20P78556 96 aa1.58□□□□□ -2.16
SMARCE1-219ENST00000583294 RUNX1Q01196 453 aa1.58□□□□□ -2.16
SMARCE1-219ENST00000583294 ZNF345Q14585 488 aa1.58□□□□□ -2.16
SMARCE1-219ENST00000583294 IBA57Q5T440 356 aaKnown RBP1.58□□□□□ -2.16
SMARCE1-219ENST00000583294 Q6ZS49 121 aa1.58□□□□□ -2.16
SMARCE1-219ENST00000583294 DCXRQ7Z4W1 244 aa1.58□□□□□ -2.16
SMARCE1-219ENST00000583294 TMEM86BQ8N661 226 aa1.58□□□□□ -2.16
SMARCE1-219ENST00000583294 ZNF439Q8NDP4 499 aa1.58□□□□□ -2.16
SMARCE1-219ENST00000583294 TONSLQ96HA7 1378 aa1.58□□□□□ -2.16
SMARCE1-219ENST00000583294 IGKV3-7A0A075B6H7 116 aa1.57□□□□□ -2.16
SMARCE1-219ENST00000583294 IGKV1D-43A0A0B4J1Z2 117 aa1.57□□□□□ -2.16
SMARCE1-219ENST00000583294 TMEM212A6NML5 194 aa1.57□□□□□ -2.16
SMARCE1-219ENST00000583294 METTL15P1P0C7V9 234 aa1.57□□□□□ -2.16
SMARCE1-219ENST00000583294 HIST1H1EP10412 219 aaKnown RBP1.57□□□□□ -2.16
SMARCE1-219ENST00000583294 Q8N2B8 174 aa1.57□□□□□ -2.16
SMARCE1-219ENST00000583294 DERL1Q9BUN8 251 aa1.57□□□□□ -2.16
SMARCE1-219ENST00000583294 MICAL3Q7RTP6 2002 aa1.56□□□□□ -2.16
SMARCE1-219ENST00000583294 G6PCP35575 357 aa1.56□□□□□ -2.16
SMARCE1-219ENST00000583294 ZNF80P51504 273 aaPredicted RBP1.56□□□□□ -2.16
SMARCE1-219ENST00000583294 IFITM2Q01629 132 aa1.56□□□□□ -2.16
SMARCE1-219ENST00000583294 OR2F1Q13607 317 aa1.56□□□□□ -2.16
SMARCE1-219ENST00000583294 CCDC122Q5T0U0 273 aa1.56□□□□□ -2.16
SMARCE1-219ENST00000583294 WFDC11Q8NEX6 87 aa1.56□□□□□ -2.16
SMARCE1-219ENST00000583294 MRPL30Q8TCC3 161 aaKnown RBP1.56□□□□□ -2.16
SMARCE1-219ENST00000583294 C11orf40Q8WZ69 217 aa1.56□□□□□ -2.16
SMARCE1-219ENST00000583294 PARD6GQ9BYG4 376 aaPredicted RBP1.56□□□□□ -2.16
SMARCE1-219ENST00000583294 PKIGQ9Y2B9 76 aa1.56□□□□□ -2.16
SMARCE1-219ENST00000583294 TTC21AQ8NDW8 1320 aa1.56□□□□□ -2.16
SMARCE1-219ENST00000583294 AHSA1O95433 338 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 IGKV1-5P01602 117 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 HIST1H2BOP23527 126 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 HIST1H2BBP33778 126 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 HIST1H2BDP58876 126 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 HIST1H2BCP62807 126 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 HBA1P69905 142 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 HIST3H3Q16695 136 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 HIST2H2BEQ16778 126 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 AAED1Q7RTV5 226 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 BPIFA4PQ86YQ2 179 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 IQCF2Q8IXL9 164 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 C1orf158Q8N1D5 194 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 MCFD2Q8NI22 146 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 HIST1H2BHQ93079 126 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 TMEM106AQ96A25 262 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 HIST1H2BNQ99877 126 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 HIST1H2BMQ99879 126 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 YIPF3Q9GZM5 350 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 MED9Q9NWA0 146 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 TP73-AS1Q9UF72 201 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 SNAPC4Q5SXM2 1469 aa1.55□□□□□ -2.16
SMARCE1-219ENST00000583294 PSMD12O00232 456 aaPredicted RBP1.54□□□□□ -2.16
SMARCE1-219ENST00000583294 CLPSP04118 112 aa1.54□□□□□ -2.16
SMARCE1-219ENST00000583294 RASSF5Q8WWW0 418 aa1.54□□□□□ -2.16
SMARCE1-219ENST00000583294 PPP1R2P1Q96PQ5 205 aa1.54□□□□□ -2.16
SMARCE1-219ENST00000583294 REG4Q9BYZ8 158 aa1.54□□□□□ -2.16
SMARCE1-219ENST00000583294 POLEQ07864 2286 aa1.54□□□□□ -2.16
SMARCE1-219ENST00000583294 NIPSNAP2O75323 286 aa1.53□□□□□ -2.16
SMARCE1-219ENST00000583294 HLA-DRB1P01911 266 aa1.53□□□□□ -2.16
SMARCE1-219ENST00000583294 CD79AP11912 226 aa1.53□□□□□ -2.16
SMARCE1-219ENST00000583294 DEFA1P59665 94 aa1.53□□□□□ -2.16
SMARCE1-219ENST00000583294 KCNJ8Q15842 424 aa1.53□□□□□ -2.16
SMARCE1-219ENST00000583294 RPL22L1Q6P5R6 122 aaKnown RBP1.53□□□□□ -2.16
SMARCE1-219ENST00000583294 LCN15Q6UWW0 184 aa1.53□□□□□ -2.16
SMARCE1-219ENST00000583294 IMP4Q96G21 291 aaKnown RBP1.53□□□□□ -2.16
SMARCE1-219ENST00000583294 ARL5BQ96KC2 179 aa1.53□□□□□ -2.16
SMARCE1-219ENST00000583294 DOCK5Q9H7D0 1870 aa1.53□□□□□ -2.16
SMARCE1-219ENST00000583294 KIF13BQ9NQT8 1826 aa1.53□□□□□ -2.16
SMARCE1-219ENST00000583294 FBXL12Q9NXK8 326 aa1.53□□□□□ -2.16
SMARCE1-219ENST00000583294 NOSIPQ9Y314 301 aaKnown RBP1.53□□□□□ -2.16
SMARCE1-219ENST00000583294 M0R036 132 aa1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 IL9P15248 144 aa1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 SNRPD2P62316 118 aaKnown RBP1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 STX5Q13190 355 aa1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 ZNF846Q147U1 533 aa1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 C10orf55Q5SWW7 151 aa1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 PTRHD1Q6GMV3 140 aaKnown RBP1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 C20orf196Q8IYI0 205 aa1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 LRRC25Q8N386 305 aaPredicted RBP1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 ANKRD29Q8N6D5 301 aa1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 SCGB3A1Q96QR1 104 aa1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 SERPINI1Q99574 410 aa1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 GINS4Q9BRT9 223 aa1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 C11orf68Q9H3H3 251 aaKnown RBP1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 PRTFDC1Q9NRG1 225 aa1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 ALPK2Q86TB3 2170 aa1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 DLG5Q8TDM6 1919 aa1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 STRCQ7RTU9 1775 aa1.52□□□□□ -2.17
SMARCE1-219ENST00000583294 FAAHO00519 579 aa1.51□□□□□ -2.17
SMARCE1-219ENST00000583294 SHBGP04278 402 aa1.51□□□□□ -2.17
SMARCE1-219ENST00000583294 IFNA16P05015 189 aa1.51□□□□□ -2.17
SMARCE1-219ENST00000583294 HIST1H1TP22492 207 aaPredicted RBP1.51□□□□□ -2.17
SMARCE1-219ENST00000583294 SULT1A1P50225 295 aa1.51□□□□□ -2.17
SMARCE1-219ENST00000583294 PSME3P61289 254 aa1.51□□□□□ -2.17
SMARCE1-219ENST00000583294 SPANXN3Q5MJ09 141 aa1.51□□□□□ -2.17
SMARCE1-219ENST00000583294 CLVS1Q8IUQ0 354 aaPredicted RBP1.51□□□□□ -2.17
SMARCE1-219ENST00000583294 DNAJC9Q8WXX5 260 aa1.51□□□□□ -2.17
SMARCE1-219ENST00000583294 OR52E6Q96RD3 313 aa1.51□□□□□ -2.17
SMARCE1-219ENST00000583294 COMMD5Q9GZQ3 224 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms