RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 LOC105371242A0A075B767 164 aa18.29■□□□□ 0.52
CCDC47-204ENST00000582252 H3BQ15 152 aa18.29■□□□□ 0.52
CCDC47-204ENST00000582252 RNASE2P10153 161 aaKnown RBP18.29■□□□□ 0.52
CCDC47-204ENST00000582252 COX7A1P24310 79 aa18.29■□□□□ 0.52
CCDC47-204ENST00000582252 TVP23CQ96ET8 276 aa18.29■□□□□ 0.52
CCDC47-204ENST00000582252 GCN1Q92616 2671 aaKnown RBP18.29■□□□□ 0.52
CCDC47-204ENST00000582252 IGHV1-3A0A0C4DH29 117 aa18.29■□□□□ 0.52
CCDC47-204ENST00000582252 LOC105371267A0A1B0GV96 52 aa18.29■□□□□ 0.52
CCDC47-204ENST00000582252 C22orf46C9J442 243 aa18.29■□□□□ 0.52
CCDC47-204ENST00000582252 CDKN1AP38936 164 aa18.29■□□□□ 0.52
CCDC47-204ENST00000582252 RPL29P47914 159 aaKnown RBP18.29■□□□□ 0.52
CCDC47-204ENST00000582252 SLC35E3Q7Z769 313 aa18.29■□□□□ 0.52
CCDC47-204ENST00000582252 MOB3BQ86TA1 216 aa18.29■□□□□ 0.52
CCDC47-204ENST00000582252 MMD2Q8IY49 270 aa18.29■□□□□ 0.52
CCDC47-204ENST00000582252 C20orf24Q9BUV8 137 aa18.29■□□□□ 0.52
CCDC47-204ENST00000582252 ZNF430Q9H8G1 570 aaPredicted RBP18.29■□□□□ 0.52
CCDC47-204ENST00000582252 OVOL3O00110 214 aa18.28■□□□□ 0.52
CCDC47-204ENST00000582252 SLC25A17O43808 307 aa18.28■□□□□ 0.52
CCDC47-204ENST00000582252 FBP1P09467 338 aa18.28■□□□□ 0.52
CCDC47-204ENST00000582252 MEF2BQ02080 365 aaPredicted RBP18.28■□□□□ 0.52
CCDC47-204ENST00000582252 TMEM144Q7Z5S9 345 aa18.28■□□□□ 0.52
CCDC47-204ENST00000582252 OR4P4Q8NGL7 312 aa18.28■□□□□ 0.52
CCDC47-204ENST00000582252 MAS1LP35410 378 aa18.27■□□□□ 0.52
CCDC47-204ENST00000582252 B2MP61769 119 aa18.27■□□□□ 0.52
CCDC47-204ENST00000582252 PNRC1Q12796 327 aaPredicted RBP18.27■□□□□ 0.52
CCDC47-204ENST00000582252 IQCF2Q8IXL9 164 aa18.27■□□□□ 0.52
CCDC47-204ENST00000582252 PNKDQ8N490 385 aa18.27■□□□□ 0.52
CCDC47-204ENST00000582252 IGFBPL1Q8WX77 278 aa18.27■□□□□ 0.52
CCDC47-204ENST00000582252 CACNG8Q8WXS5 425 aa18.27■□□□□ 0.52
CCDC47-204ENST00000582252 RNF5Q99942 180 aa18.27■□□□□ 0.52
CCDC47-204ENST00000582252 FASNP49327 2511 aaKnown RBP18.27■□□□□ 0.52
CCDC47-204ENST00000582252 HMGB3O15347 200 aaKnown RBP18.26■□□□□ 0.51
CCDC47-204ENST00000582252 GPX4P36969 197 aaPredicted RBP18.26■□□□□ 0.51
CCDC47-204ENST00000582252 MIC13Q5XKP0 118 aa18.26■□□□□ 0.51
CCDC47-204ENST00000582252 CCL19Q99731 98 aa18.26■□□□□ 0.51
CCDC47-204ENST00000582252 ACTL6BO94805 426 aa18.26■□□□□ 0.51
CCDC47-204ENST00000582252 YIF1AO95070 293 aa18.26■□□□□ 0.51
CCDC47-204ENST00000582252 CEACAM3P40198 252 aa18.26■□□□□ 0.51
CCDC47-204ENST00000582252 EFNA4P52798 201 aa18.26■□□□□ 0.51
CCDC47-204ENST00000582252 FAM90A2PQ658T7 463 aa18.26■□□□□ 0.51
CCDC47-204ENST00000582252 OR11H6Q8NGC7 330 aa18.26■□□□□ 0.51
CCDC47-204ENST00000582252 OR10W1Q8NGF6 305 aa18.26■□□□□ 0.51
CCDC47-204ENST00000582252 RNASEH2CQ8TDP1 164 aaKnown RBP18.26■□□□□ 0.51
CCDC47-204ENST00000582252 IGHV3-72A0A0B4J1Y9 119 aa18.25■□□□□ 0.51
CCDC47-204ENST00000582252 B4DEV8 164 aa18.25■□□□□ 0.51
CCDC47-204ENST00000582252 TMEM250H0YL14 139 aa18.25■□□□□ 0.51
CCDC47-204ENST00000582252 CD69Q07108 199 aa18.25■□□□□ 0.51
CCDC47-204ENST00000582252 KIR3DL3Q8N743 410 aa18.25■□□□□ 0.51
CCDC47-204ENST00000582252 STPG3Q8N7X2 389 aa18.25■□□□□ 0.51
CCDC47-204ENST00000582252 NANPQ8TBE9 248 aa18.25■□□□□ 0.51
CCDC47-204ENST00000582252 SLC35E1Q96K37 410 aa18.25■□□□□ 0.51
CCDC47-204ENST00000582252 HTR1DP28221 377 aa18.24■□□□□ 0.51
CCDC47-204ENST00000582252 RHOBP62745 196 aa18.24■□□□□ 0.51
CCDC47-204ENST00000582252 C1orf122Q6ZSJ8 110 aa18.24■□□□□ 0.51
CCDC47-204ENST00000582252 PSMG3-AS1Q96PY0 264 aa18.24■□□□□ 0.51
CCDC47-204ENST00000582252 TMPRSS5Q9H3S3 457 aa18.24■□□□□ 0.51
CCDC47-204ENST00000582252 MALRD1Q5VYJ5 2156 aa18.24■□□□□ 0.51
CCDC47-204ENST00000582252 A0A087WWC5 75 aa18.23■□□□□ 0.51
CCDC47-204ENST00000582252 LY6LH3BQJ8 138 aa18.23■□□□□ 0.51
CCDC47-204ENST00000582252 CXorf1O96002 111 aa18.23■□□□□ 0.51
CCDC47-204ENST00000582252 MT-CO2P00403 227 aa18.23■□□□□ 0.51
CCDC47-204ENST00000582252 PRTN3P24158 256 aa18.23■□□□□ 0.51
CCDC47-204ENST00000582252 AKR1C3P42330 323 aa18.23■□□□□ 0.51
CCDC47-204ENST00000582252 ARF6P62330 175 aa18.23■□□□□ 0.51
CCDC47-204ENST00000582252 SSMEM1Q8WWF3 244 aa18.23■□□□□ 0.51
CCDC47-204ENST00000582252 C1orf159Q96HA4 380 aa18.23■□□□□ 0.51
CCDC47-204ENST00000582252 ANKRD17O75179 2603 aaKnown RBP18.23■□□□□ 0.51
CCDC47-204ENST00000582252 ABCA12Q86UK0 2595 aa18.23■□□□□ 0.51
CCDC47-204ENST00000582252 COL8A1P27658 744 aa18.23■□□□□ 0.51
CCDC47-204ENST00000582252 DLX1P56177 255 aa18.23■□□□□ 0.51
CCDC47-204ENST00000582252 PRSS8Q16651 343 aa18.23■□□□□ 0.51
CCDC47-204ENST00000582252 TPTE2P1Q5T6R2 138 aa18.23■□□□□ 0.51
CCDC47-204ENST00000582252 DPM3Q9P2X0 92 aa18.23■□□□□ 0.51
CCDC47-204ENST00000582252 CELSR2Q9HCU4 2923 aa18.23■□□□□ 0.51
CCDC47-204ENST00000582252 EIF3GO75821 320 aaKnown RBP eCLIP18.22■□□□□ 0.51
CCDC47-204ENST00000582252 CRYGBP07316 175 aa18.22■□□□□ 0.51
CCDC47-204ENST00000582252 STAG3L2P0CL84 134 aa18.22■□□□□ 0.51
CCDC47-204ENST00000582252 STAG3L3P0CL85 134 aa18.22■□□□□ 0.51
CCDC47-204ENST00000582252 RPL27AP46776 148 aaKnown RBP18.22■□□□□ 0.51
CCDC47-204ENST00000582252 CD81P60033 236 aa18.22■□□□□ 0.51
CCDC47-204ENST00000582252 PRR20EP86478 221 aa18.22■□□□□ 0.51
CCDC47-204ENST00000582252 PRR20CP86479 221 aa18.22■□□□□ 0.51
CCDC47-204ENST00000582252 PRR20DP86480 221 aa18.22■□□□□ 0.51
CCDC47-204ENST00000582252 PRR20BP86481 221 aa18.22■□□□□ 0.51
CCDC47-204ENST00000582252 PRR20AP86496 221 aa18.22■□□□□ 0.51
CCDC47-204ENST00000582252 PSG5Q15238 335 aa18.22■□□□□ 0.51
CCDC47-204ENST00000582252 GCSAMLQ5JQS6 135 aa18.22■□□□□ 0.51
CCDC47-204ENST00000582252 SLC16A13Q7RTY0 426 aa18.22■□□□□ 0.51
CCDC47-204ENST00000582252 TXNDC17Q9BRA2 123 aa18.22■□□□□ 0.51
CCDC47-204ENST00000582252 COLCA2A8K830 154 aa18.21■□□□□ 0.51
CCDC47-204ENST00000582252 FLI1Q01543 452 aaPredicted RBP18.21■□□□□ 0.51
CCDC47-204ENST00000582252 GAMTQ14353 236 aa18.21■□□□□ 0.51
CCDC47-204ENST00000582252 C19orf24Q9BVV8 132 aa18.21■□□□□ 0.51
CCDC47-204ENST00000582252 MLXQ9UH92 298 aa18.21■□□□□ 0.51
CCDC47-204ENST00000582252 SLC45A2Q9UMX9 530 aa18.21■□□□□ 0.51
CCDC47-204ENST00000582252 SIGLEC9Q9Y336 463 aa18.21■□□□□ 0.51
CCDC47-204ENST00000582252 CGB1A6NKQ9 187 aa18.2■□□□□ 0.5
CCDC47-204ENST00000582252 ZNF727A8MUV8 499 aa18.2■□□□□ 0.5
CCDC47-204ENST00000582252 NDUFS7O75251 213 aa18.2■□□□□ 0.5
CCDC47-204ENST00000582252 MT-ND4LP03901 98 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms