RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 TNXAQ16473 311 aa7.5□□□□□ -1.21
SS18-220ENST00000582092 FFAR4Q5NUL3 377 aa7.5□□□□□ -1.21
SS18-220ENST00000582092 HAPLN4Q86UW8 402 aa7.5□□□□□ -1.21
SS18-220ENST00000582092 OR4P4Q8NGL7 312 aa7.5□□□□□ -1.21
SS18-220ENST00000582092 SLC35E1Q96K37 410 aa7.5□□□□□ -1.21
SS18-220ENST00000582092 ACTR3CQ9C0K3 210 aaPredicted RBP7.5□□□□□ -1.21
SS18-220ENST00000582092 METTL1Q9UBP6 276 aaKnown RBP7.5□□□□□ -1.21
SS18-220ENST00000582092 SETD2Q9BYW2 2564 aaPredicted RBP7.5□□□□□ -1.21
SS18-220ENST00000582092 A0A1W2PPV4 95 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 RRHO14718 337 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 SNRNP70P08621 437 aaKnown RBP7.49□□□□□ -1.21
SS18-220ENST00000582092 IL6RP08887 468 aaPredicted RBP7.49□□□□□ -1.21
SS18-220ENST00000582092 OR13C7P0DN81 318 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 RPL27AP46776 148 aaKnown RBP7.49□□□□□ -1.21
SS18-220ENST00000582092 DLX1P56177 255 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 KLRD1Q13241 179 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 HNF4GQ14541 408 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 GUK1Q16774 197 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 CYB5R2Q6BCY4 276 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 ETFRF1Q6IPR1 90 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 Q8N7P7 452 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 MAPK1IP1LQ8NDC0 245 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 OR10G4Q8NGN3 311 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 OR10G9Q8NGN4 311 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 OR10G7Q8NGN6 311 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 OR2T10Q8NGZ9 312 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 C22orf15Q8WYQ4 148 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 YAE1D1Q9NRH1 226 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 TBL2Q9Y4P3 447 aaKnown RBP7.49□□□□□ -1.21
SS18-220ENST00000582092 MALRD1Q5VYJ5 2156 aa7.49□□□□□ -1.21
SS18-220ENST00000582092 TMEM218A2RU14 115 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 LY6LH3BQJ8 138 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 TIMM23O14925 209 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 MOSP00540 346 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 ZFP36P26651 326 aaKnown RBP7.48□□□□□ -1.21
SS18-220ENST00000582092 COMPP49747 757 aaPredicted RBP7.48□□□□□ -1.21
SS18-220ENST00000582092 FHITP49789 147 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 LMO4P61968 165 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 PSG5Q15238 335 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 MMDQ15546 238 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 SSX2Q16385 188 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 TMEM249Q2WGJ8 235 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 C2orf83Q53S99 150 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 TEPPQ6URK8 271 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 RBMS3Q6XE24 437 aaKnown RBP7.48□□□□□ -1.21
SS18-220ENST00000582092 PPP1R27Q86WC6 154 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 IQCF2Q8IXL9 164 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 ABHD5Q8WTS1 349 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 MALSU1Q96EH3 234 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 LINC00052Q96N35 136 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 NPCDR1Q9BY65 106 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 SMDT1Q9H4I9 107 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 TMEM231Q9H6L2 316 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 ZNF430Q9H8G1 570 aaPredicted RBP7.48□□□□□ -1.21
SS18-220ENST00000582092 UNKLQ9H9P5 680 aaKnown RBP7.48□□□□□ -1.21
SS18-220ENST00000582092 NDUFA4L2Q9NRX3 87 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 PLA2G2EQ9NZK7 142 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 C1RLQ9NZP8 487 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 WDR83OSQ9Y284 106 aa7.48□□□□□ -1.21
SS18-220ENST00000582092 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.47□□□□□ -1.21
SS18-220ENST00000582092 RBFOX3A6NFN3 312 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 NCBP2LA6PVI3 153 aaKnown RBP7.47□□□□□ -1.21
SS18-220ENST00000582092 PMS2P5A8MQ11 134 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 INAFM1C9JVW0 142 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 FNDC10F2Z333 226 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 NBR2O15453 112 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 MT-CO2P00403 227 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 IGKV1D-33P01593 117 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 IGKV1-33P01594 117 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 IGLV2-23P01705 113 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 FAM106CPP0CH98 169 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 MYOD1P15172 320 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 HOXB4P17483 251 aaPredicted RBP7.47□□□□□ -1.21
SS18-220ENST00000582092 GPX4P36969 197 aaPredicted RBP7.47□□□□□ -1.21
SS18-220ENST00000582092 UBE2E1P51965 193 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 PRSS8Q16651 343 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 VWC2Q2TAL6 325 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 TUSC1Q2TAM9 212 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 FAM122CQ6P4D5 195 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 LCN15Q6UWW0 184 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 SVBPQ8N300 66 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 CACNG8Q8WXS5 425 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 SIRPDQ9H106 197 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 RPRMQ9NS64 109 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 SIGLEC9Q9Y336 463 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 RFNGQ9Y644 331 aa7.47□□□□□ -1.21
SS18-220ENST00000582092 CTXND1A0A1B0GTU2 59 aa7.46□□□□□ -1.22
SS18-220ENST00000582092 A0A1W2PPI3 338 aa7.46□□□□□ -1.22
SS18-220ENST00000582092 MAP1LC3B2A6NCE7 125 aa7.46□□□□□ -1.22
SS18-220ENST00000582092 ODF3BA8MYP8 253 aa7.46□□□□□ -1.22
SS18-220ENST00000582092 VWC2LB2RUY7 222 aa7.46□□□□□ -1.22
SS18-220ENST00000582092 CORTO00230 105 aa7.46□□□□□ -1.22
SS18-220ENST00000582092 CRLF1O75462 422 aa7.46□□□□□ -1.22
SS18-220ENST00000582092 VENTXO95231 258 aa7.46□□□□□ -1.22
SS18-220ENST00000582092 SNAPINO95295 136 aa7.46□□□□□ -1.22
SS18-220ENST00000582092 DEFA4P12838 97 aa7.46□□□□□ -1.22
SS18-220ENST00000582092 TMEM11P17152 192 aa7.46□□□□□ -1.22
SS18-220ENST00000582092 M6PRP20645 277 aa7.46□□□□□ -1.22
SS18-220ENST00000582092 HNF1AP20823 631 aa7.46□□□□□ -1.22
SS18-220ENST00000582092 TAGLN2P37802 199 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms