RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 LINC00696Q6ZRV3 163 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 C11orf53Q8IXP5 236 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 TMEM256Q8N2U0 113 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 MAFAQ8NHW3 353 aaPredicted RBP4.35□□□□□ -1.71
CDH8-206ENST00000580044 UBALD1Q8TB05 177 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 LRRC29Q8WV35 223 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 DDB2Q92466 427 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 NEUROG1Q92886 237 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 SMIM12Q96EX1 92 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 HSPB9Q9BQS6 159 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 DERL1Q9BUN8 251 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 HES7Q9BYE0 225 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 IFI27L2Q9H2X8 130 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 PLEKHA3Q9HB20 300 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 MRPL27Q9P0M9 148 aaKnown RBP4.35□□□□□ -1.71
CDH8-206ENST00000580044 UQCR10Q9UDW1 63 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 NAT8BQ9UHF3 227 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 GOLT1BQ9Y3E0 138 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 CBY1Q9Y3M2 126 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 RTTNQ86VV8 2226 aa4.35□□□□□ -1.71
CDH8-206ENST00000580044 GRIFINA4D1Z8 144 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 SRRM5B3KS81 715 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 DIRC3C9JPN6 131 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 WNT9BO14905 357 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 DLEU1O43261 78 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 ZNF253O75346 499 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 IGLV1-44P01699 117 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 IGHG3P01860 377 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 GPX1P07203 203 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 ZNF25P17030 456 aaPredicted RBP4.34□□□□□ -1.71
CDH8-206ENST00000580044 MPV17P39210 176 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 IER3P46695 156 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 PRCDQ00LT1 54 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 RELQ04864 619 aaPredicted RBP4.34□□□□□ -1.71
CDH8-206ENST00000580044 GUSBP1Q15486 140 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 PMCHL1Q16048 86 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 C3AR1Q16581 482 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 C3orf36Q3SXR2 165 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 TMEM177Q53S58 311 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 C2orf83Q53S99 150 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 SPINK9Q5DT21 86 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 CENPWQ5EE01 88 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 GCSAMLQ5JQS6 135 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 FAM231DQ6ZW35 169 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 Q6ZWC4 215 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 TCF23Q7RTU1 214 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 LRP11Q86VZ4 500 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 ZNF114Q8NC26 417 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 OR4P4Q8NGL7 312 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 OR5B3Q8NH48 314 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 WIPF2Q8TF74 440 aaPredicted RBP4.34□□□□□ -1.71
CDH8-206ENST00000580044 BORCS7Q96B45 105 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 SARAFQ96BY9 339 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 C16orf92Q96LL3 132 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 ZNF714Q96N38 554 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 FAM234AQ9H0X4 552 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 CALYQ9NYX4 217 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 SPRR3Q9UBC9 169 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 YTHDF2Q9Y5A9 579 aaKnown RBP4.34□□□□□ -1.71
CDH8-206ENST00000580044 TNFRSF18Q9Y5U5 241 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 SOX21Q9Y651 276 aaPredicted RBP4.34□□□□□ -1.71
CDH8-206ENST00000580044 V9GYV3 84 aa4.34□□□□□ -1.71
CDH8-206ENST00000580044 TET2Q6N021 2002 aaPredicted RBP4.33□□□□□ -1.72
CDH8-206ENST00000580044 IGHV3-43A0A0B4J1X8 118 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 SMIM27A0A1W2PRY6 76 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 IZUMO1RA6ND01 250 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 PGPEP1LA6NFU8 196 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 INS-IGF2F8WCM5 200 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 K7EN84 100 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 LYZL6O75951 148 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 CA2P00918 260 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 CECR9P0C854 216 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 IGHV3-43DP0DP04 118 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 EGR1P18146 543 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 BTF3P20290 206 aaKnown RBP4.33□□□□□ -1.72
CDH8-206ENST00000580044 AMTP48728 403 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 PPOXP50336 477 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 SUB1P53999 127 aaKnown RBP eCLIP4.33□□□□□ -1.72
CDH8-206ENST00000580044 LOXL3P58215 753 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 BPIFB3P59826 476 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 KRTDAPP60985 99 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 RPS16P62249 146 aaKnown RBP4.33□□□□□ -1.72
CDH8-206ENST00000580044 EDDM3AQ14507 147 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 PSG5Q15238 335 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 ALKBH6Q3KRA9 238 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 IBA57Q5T440 356 aaKnown RBP4.33□□□□□ -1.72
CDH8-206ENST00000580044 OR4A47Q6IF82 309 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 Q6ZR03 302 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 ZNF826PQ6ZT77 177 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 ATP5L2Q7Z4Y8 100 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 CXorf67Q86X51 503 aaPredicted RBP4.33□□□□□ -1.72
CDH8-206ENST00000580044 OR8I2Q8N0Y5 310 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 CD177Q8N6Q3 437 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 STXBP6Q8NFX7 210 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 OR2Z1Q8NG97 314 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 OR1L4Q8NGR5 311 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 OR1L8Q8NGR8 309 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 OR4A5Q8NH83 315 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 VSTM2AQ8TAG5 236 aa4.33□□□□□ -1.72
CDH8-206ENST00000580044 VN1R17PQ8TDU5 208 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms