RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 TCF20Q9UGU0 1960 aaKnown RBP7.63□□□□□ -1.19
CDH8-203ENST00000577390 TMEM202A6NGA9 273 aa7.63□□□□□ -1.19
CDH8-203ENST00000577390 C19orf67A6NJJ6 358 aa7.63□□□□□ -1.19
CDH8-203ENST00000577390 PATE4P0C8F1 98 aa7.63□□□□□ -1.19
CDH8-203ENST00000577390 PSG2P11465 335 aa7.63□□□□□ -1.19
CDH8-203ENST00000577390 PPICP45877 212 aa7.63□□□□□ -1.19
CDH8-203ENST00000577390 KIAA0040Q15053 153 aa7.63□□□□□ -1.19
CDH8-203ENST00000577390 CCL13Q99616 98 aa7.63□□□□□ -1.19
CDH8-203ENST00000577390 G6PC2Q9NQR9 355 aa7.63□□□□□ -1.19
CDH8-203ENST00000577390 GPR132Q9UNW8 380 aa7.63□□□□□ -1.19
CDH8-203ENST00000577390 SPG11Q96JI7 2443 aa7.63□□□□□ -1.19
CDH8-203ENST00000577390 E9PQ18 207 aa7.63□□□□□ -1.19
CDH8-203ENST00000577390 ID3Q02535 119 aa7.63□□□□□ -1.19
CDH8-203ENST00000577390 FUT5Q11128 374 aa7.63□□□□□ -1.19
CDH8-203ENST00000577390 OR10S1Q8NGN2 331 aa7.63□□□□□ -1.19
CDH8-203ENST00000577390 TM4SF18Q96CE8 201 aa7.63□□□□□ -1.19
CDH8-203ENST00000577390 SHANK3Q9BYB0 1731 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 PPIAL4CA0A0B4J2A2 164 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 PPIAL4GP0DN37 164 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 GATA4P43694 442 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 CCL4L1Q8NHW4 92 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 TMEM167AQ8TBQ9 72 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 PARLQ9H300 379 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 LMO7DNF2Z398 122 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 CD7P09564 240 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 MDKP21741 143 aaPredicted RBP7.62□□□□□ -1.19
CDH8-203ENST00000577390 STPG1Q5TH74 334 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 SORL1Q92673 2214 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 SLC25A38Q96DW6 304 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 TMEM74BQ9NUR3 256 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 FOXD3Q9UJU5 478 aaPredicted RBP7.62□□□□□ -1.19
CDH8-203ENST00000577390 CLDN14O95500 239 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 DRD3P35462 400 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 SPSB1Q96BD6 273 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 ALG14Q96F25 216 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 RRHO14718 337 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 PPBPP02775 128 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 RSPO4Q2I0M5 234 aaPredicted RBP7.62□□□□□ -1.19
CDH8-203ENST00000577390 TMEM30AQ9NV96 361 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 CTSVO60911 334 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 UBE2BP63146 152 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 SERF2P84101 59 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 SFTA2Q6UW10 78 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 RCC1LQ96I51 464 aaKnown RBP7.62□□□□□ -1.19
CDH8-203ENST00000577390 VCX2Q9H322 139 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 IGHV3-64A0A075B6Q5 118 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 TRAV14DV4A0A0A6YYC5 116 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 C1QL1O75973 258 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 RND3P61587 244 aa7.62□□□□□ -1.19
CDH8-203ENST00000577390 TBR1Q16650 682 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 Q71RC1 249 aaPredicted RBP7.61□□□□□ -1.19
CDH8-203ENST00000577390 APCDD1LQ8NCL9 501 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 TRAV9-2A0A087WT02 112 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 LINC00869P0C866 280 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 DUTP33316 252 aaKnown RBP7.61□□□□□ -1.19
CDH8-203ENST00000577390 DPRXA6NFQ7 191 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 GZMHP20718 246 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 CBLN1P23435 193 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 C1QL3Q5VWW1 255 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 C10orf111Q8N326 155 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 HS3ST2Q9Y278 367 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 EMDP50402 254 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 C2orf68Q2NKX9 166 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 METRNLQ641Q3 311 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 UNQ6494/PRO21346Q6UXR6 183 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 PMCHL2Q9BQD1 86 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 GTSF1LQ9H1H1 148 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 WDR54Q9H977 334 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 SPCS1Q9Y6A9 102 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 KIR2DL5BA0A0G2JN68 375 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 KIR2DL5BA0A0G2JPC4 375 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 ZNF561-AS1K7EIQ3 104 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 SYNGR3O43761 229 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 ZXDCQ2QGD7 858 aaPredicted RBP7.61□□□□□ -1.19
CDH8-203ENST00000577390 LY6G6FQ5SQ64 297 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 TCF23Q7RTU1 214 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 KIR2DL5AQ8N109 375 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 YBX2Q9Y2T7 364 aaKnown RBP7.61□□□□□ -1.19
CDH8-203ENST00000577390 TRBV24-1A0A075B6N3 115 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 RBX1P62877 108 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 C16orf54Q6UWD8 224 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 HIST1H1DP16402 221 aaKnown RBP7.61□□□□□ -1.19
CDH8-203ENST00000577390 PXMP4Q9Y6I8 212 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 DOPEY1Q5JWR5 2465 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 NPIPB4C9JG80 1138 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 CCL25O15444 150 aa7.61□□□□□ -1.19
CDH8-203ENST00000577390 PRB4P10163 310 aaPredicted RBP7.6□□□□□ -1.19
CDH8-203ENST00000577390 MMP9P14780 707 aa7.6□□□□□ -1.19
CDH8-203ENST00000577390 TRAV25A0A0B4J276 109 aa7.6□□□□□ -1.19
CDH8-203ENST00000577390 LINC01565O15544 149 aa7.6□□□□□ -1.19
CDH8-203ENST00000577390 ETHE1O95571 254 aa7.6□□□□□ -1.19
CDH8-203ENST00000577390 FGF22Q9HCT0 170 aa7.6□□□□□ -1.19
CDH8-203ENST00000577390 THAP10Q9P2Z0 257 aaPredicted RBP7.6□□□□□ -1.19
CDH8-203ENST00000577390 A0A1W2PPC1 479 aa7.6□□□□□ -1.19
CDH8-203ENST00000577390 PLPP1O14494 284 aa7.6□□□□□ -1.19
CDH8-203ENST00000577390 ZNHIT1O43257 154 aa7.6□□□□□ -1.19
CDH8-203ENST00000577390 NCR2O95944 276 aa7.6□□□□□ -1.19
CDH8-203ENST00000577390 PSG1P11464 419 aa7.6□□□□□ -1.19
CDH8-203ENST00000577390 SRSF12Q8WXF0 261 aaKnown RBP7.6□□□□□ -1.19
CDH8-203ENST00000577390 HCSTQ9UBK5 93 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms