RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 MRPS24Q96EL2 167 aaKnown RBP1.15□□□□□ -2.23
COPS3-213ENST00000577210 NIPSNAP1Q9BPW8 284 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 GINS4Q9BRT9 223 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 DERL1Q9BUN8 251 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 TRABDQ9H4I3 376 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 MED29Q9NX70 200 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 RPL26L1Q9UNX3 145 aaKnown RBP1.15□□□□□ -2.23
COPS3-213ENST00000577210 SAMHD1Q9Y3Z3 626 aaKnown RBP1.15□□□□□ -2.23
COPS3-213ENST00000577210 TIMM9Q9Y5J7 89 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 OTOFQ9HC10 1997 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 DICER1Q9UPY3 1922 aaKnown RBP1.15□□□□□ -2.23
COPS3-213ENST00000577210 SIPA1L1O43166 1804 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 SLIT2O94813 1529 aa1.15□□□□□ -2.23
COPS3-213ENST00000577210 EIF3AQ14152 1382 aaKnown RBP1.14□□□□□ -2.23
COPS3-213ENST00000577210 A0A1B0GW54 56 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 TRAPPC13A5PLN9 417 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 FABP5P3A8MUU1 101 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 G3V2T6 193 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 BUB1B-PAK6H3BSN5 160 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 PGLYRP1O75594 196 aaPredicted RBP1.14□□□□□ -2.23
COPS3-213ENST00000577210 OR2B3O76000 313 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 ZNF682O95780 498 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 FABP1P07148 127 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 C8GP07360 202 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 MSMBP08118 114 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 RPS4Y1P22090 263 aaKnown RBP1.14□□□□□ -2.23
COPS3-213ENST00000577210 CD24P25063 80 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 PSMB8P28062 276 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 EVX1P49640 407 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 POLR2GP62487 172 aaKnown RBP eCLIP1.14□□□□□ -2.23
COPS3-213ENST00000577210 HIST1H4AP62805 103 aaKnown RBP1.14□□□□□ -2.23
COPS3-213ENST00000577210 SUPT4H1P63272 117 aaKnown RBP1.14□□□□□ -2.23
COPS3-213ENST00000577210 CCL20P78556 96 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 ZNF90Q03938 601 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 RELAQ04206 551 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 RPL18Q07020 188 aaKnown RBP1.14□□□□□ -2.23
COPS3-213ENST00000577210 RHEBQ15382 184 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 SS18Q15532 418 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 KISS1Q15726 138 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 ZNF181Q2M3W8 571 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 RPL22L1Q6P5R6 122 aaKnown RBP1.14□□□□□ -2.23
COPS3-213ENST00000577210 GOLT1AQ6ZVE7 132 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 TMED4Q7Z7H5 227 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 LYG2Q86SG7 212 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 KTN1-AS1Q86SY8 53 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 LRRC28Q86X40 367 aaPredicted RBP1.14□□□□□ -2.23
COPS3-213ENST00000577210 SMIM20Q8N5G0 67 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 FAM172AQ8WUF8 416 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 TOMM6Q96B49 74 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 XAGE1AQ9HD64 81 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 SLC39A9Q9NUM3 307 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 ATPIF1Q9UII2 106 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 CCL26Q9Y258 94 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 DSCAMO60469 2012 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 UNC13AQ9UPW8 1703 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 SHANK1Q9Y566 2161 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 ZNF532Q9HCE3 1301 aa1.14□□□□□ -2.23
COPS3-213ENST00000577210 NEO1Q92859 1461 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 SLX4Q8IY92 1834 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 DSCAML1Q8TD84 2053 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 TRAV7A0A075B6U4 112 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 TMSB15BA0A087X1C1 80 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 TRAV41A0A0B4J266 112 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 MUC21A0A0G2JKD1 596 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 MUC21A0A140T8X8 626 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 SIGLEC16A6NMB1 481 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 HMSDA8MTL9 139 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 H7C2G1 150 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 J3QRK9 145 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 PGRMC1O00264 195 aaKnown RBP1.13□□□□□ -2.23
COPS3-213ENST00000577210 SLC22A1O15245 554 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 CST8O60676 142 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 SMIM10L2AP0DMW4 78 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 SMIM10L2BP0DMW5 78 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 PPIBP23284 216 aaKnown RBP1.13□□□□□ -2.23
COPS3-213ENST00000577210 ATP5G3P48201 142 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 CDC42P60953 191 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 SLC38A11Q08AI6 406 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 POU6F1Q14863 301 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 SPANXN3Q5MJ09 141 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 TRIQKQ629K1 86 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 LYZL1Q6UWQ5 148 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 SLC36A1Q7Z2H8 476 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 KRTAP13-1Q8IUC0 172 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 OR52R1Q8NGF1 315 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 OR13C4Q8NGS5 318 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 OR13C6PQ8NH95 151 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 GPR146Q96CH1 333 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 ZNF471Q9BX82 626 aaPredicted RBP1.13□□□□□ -2.23
COPS3-213ENST00000577210 MRPL40Q9NQ50 206 aaKnown RBP1.13□□□□□ -2.23
COPS3-213ENST00000577210 ERGIC3Q9Y282 383 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 FAM215AQ9Y5M1 114 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 V9GYQ6 96 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 TOPBP1Q92547 1522 aa1.13□□□□□ -2.23
COPS3-213ENST00000577210 DENND4BO75064 1496 aaPredicted RBP1.12□□□□□ -2.23
COPS3-213ENST00000577210 ZNF638Q14966 1978 aaKnown RBP1.12□□□□□ -2.23
COPS3-213ENST00000577210 SHROOM3Q8TF72 1996 aa1.12□□□□□ -2.23
COPS3-213ENST00000577210 KIF24Q5T7B8 1368 aa1.12□□□□□ -2.23
COPS3-213ENST00000577210 NLRC5Q86WI3 1866 aa1.12□□□□□ -2.23
COPS3-213ENST00000577210 TRAV4A0A0B4J268 109 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms