RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 EIF4EP06730 217 aaKnown RBP8.5□□□□□ -1.05
CTDNEP1-212ENST00000576613 CTSGP08311 255 aa8.5□□□□□ -1.05
CTDNEP1-212ENST00000576613 FXYD4P59646 89 aa8.5□□□□□ -1.05
CTDNEP1-212ENST00000576613 C22orf42Q6IC83 251 aa8.5□□□□□ -1.05
CTDNEP1-212ENST00000576613 ZNF773Q6PK81 442 aa8.5□□□□□ -1.05
CTDNEP1-212ENST00000576613 GBGT1Q8N5D6 347 aa8.5□□□□□ -1.05
CTDNEP1-212ENST00000576613 OR10C1Q96KK4 312 aa8.5□□□□□ -1.05
CTDNEP1-212ENST00000576613 TMEM56Q96MV1 263 aa8.5□□□□□ -1.05
CTDNEP1-212ENST00000576613 NDUFA4L2Q9NRX3 87 aa8.5□□□□□ -1.05
CTDNEP1-212ENST00000576613 IGHV3-49A0A0A0MS15 119 aa8.49□□□□□ -1.05
CTDNEP1-212ENST00000576613 SNAPC5O75971 98 aa8.49□□□□□ -1.05
CTDNEP1-212ENST00000576613 DFFBO76075 338 aa8.49□□□□□ -1.05
CTDNEP1-212ENST00000576613 PTHLHP12272 177 aa8.49□□□□□ -1.05
CTDNEP1-212ENST00000576613 TMEM41BQ5BJD5 291 aa8.49□□□□□ -1.05
CTDNEP1-212ENST00000576613 FAM90A2PQ658T7 463 aa8.49□□□□□ -1.05
CTDNEP1-212ENST00000576613 ZNF818PQ6ZRF7 136 aa8.49□□□□□ -1.05
CTDNEP1-212ENST00000576613 TMEM17Q86X19 198 aa8.49□□□□□ -1.05
CTDNEP1-212ENST00000576613 HOGA1Q86XE5 327 aa8.49□□□□□ -1.05
CTDNEP1-212ENST00000576613 Q8NAQ8 132 aa8.49□□□□□ -1.05
CTDNEP1-212ENST00000576613 LGALS14Q8TCE9 139 aa8.49□□□□□ -1.05
CTDNEP1-212ENST00000576613 DGCR14Q96DF8 476 aaKnown RBP8.49□□□□□ -1.05
CTDNEP1-212ENST00000576613 GINS3Q9BRX5 216 aa8.49□□□□□ -1.05
CTDNEP1-212ENST00000576613 DAPK2Q9UIK4 370 aa8.49□□□□□ -1.05
CTDNEP1-212ENST00000576613 OR51B2Q9Y5P1 312 aa8.49□□□□□ -1.05
CTDNEP1-212ENST00000576613 PKHD1P08F94 4074 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 TRAV10A0A0B4J240 114 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 DNASE2O00115 360 aaPredicted RBP8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 MIFP14174 115 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 F2RP25116 425 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 MFAP4P55083 255 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 AQP4P55087 323 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 HERV-K104P61576 105 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 TCF24Q7RTU0 167 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 TPRA1Q86W33 373 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 STHQ8IWL8 128 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 CADM3Q8N126 398 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 TSPAN14Q8NG11 270 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 OR1P1Q8NH06 330 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 SLC25A46Q96AG3 418 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 TXN2Q99757 166 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 RHBDL2Q9NX52 303 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 FKBP11Q9NYL4 201 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 PRNDQ9UKY0 176 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 BLOC1S6Q9UL45 172 aa8.48□□□□□ -1.05
CTDNEP1-212ENST00000576613 IGHV4-4A0A075B6R2 117 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 IGHV3OR16-13A0A075B7E8 117 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 IGHV3-74A0A0B4J1X5 117 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 TRAV2A0A0B4J234 112 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 IGHV4-28A0A0C4DH34 117 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 A0A1B0GVY2 172 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 ST8SIA3O43173 380 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 KRASP01116 189 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 RLN1P04808 185 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 HLA-DMBP28068 263 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 DEFB131AP59861 70 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 RPL11P62913 178 aaKnown RBP8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 LEMD1Q68G75 181 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 GIMAP1Q8WWP7 306 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 MISP3Q96FF7 219 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 NXF2Q9GZY0 626 aaKnown RBP8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 MS4A6AQ9H2W1 248 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 NSG2Q9Y328 171 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 RYR1P21817 5038 aa8.47□□□□□ -1.05
CTDNEP1-212ENST00000576613 TRAV18A0A075B6X5 111 aa8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 PRSS29PA6NIE9 313 aa8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 GNG7O60262 68 aa8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 SPP1P10451 314 aa8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 GNRHRP30968 328 aa8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 FGF9P31371 208 aaPredicted RBP8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 SCAND1P57086 179 aa8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 PVRIGQ6DKI7 326 aa8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 SFXN4Q6P4A7 337 aa8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 Q6ZTC4 211 aa8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 OR5AP2Q8NGF4 316 aa8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 ZNF414Q96IQ9 312 aa8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 TSC22D3Q99576 134 aa8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 RNF126Q9BV68 326 aa8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 TMEM231Q9H6L2 316 aa8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 TXNL4BQ9NX01 149 aaKnown RBP8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 RRP15Q9Y3B9 282 aaKnown RBP8.46□□□□□ -1.06
CTDNEP1-212ENST00000576613 FAT2Q9NYQ8 4349 aa8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 A0A0A6YYH2 397 aa8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 A6NJ64 397 aa8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 I3L2K1 104 aa8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 FCER2P06734 321 aa8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 RBMY1A1P0DJD3 496 aaKnown RBP8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 RBMY1CP0DJD4 496 aa8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 P0DMU3 169 aa8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 FAM231AP0DMU4 169 aa8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 FAM231CP0DMU5 169 aa8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 G6PCP35575 357 aa8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 LPAR6P43657 344 aa8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 CBX5P45973 191 aa8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 RBMY1FQ15415 496 aaKnown RBP8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 MORN3Q6PF18 240 aaPredicted RBP8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 CMTM1Q8IZ96 169 aa8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 DUSP18Q8NEJ0 188 aa8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 FCAMRQ8WWV6 532 aa8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 ST8SIA2Q92186 375 aa8.45□□□□□ -1.06
CTDNEP1-212ENST00000576613 VSIRQ9H7M9 311 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms