RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 B9D2Q9BPU9 175 aa6.57□□□□□ -1.36
SMG6-216ENST00000575176 AIFM2Q9BRQ8 373 aa6.57□□□□□ -1.36
SMG6-216ENST00000575176 COMMD5Q9GZQ3 224 aa6.57□□□□□ -1.36
SMG6-216ENST00000575176 ZC4H2Q9NQZ6 224 aa6.57□□□□□ -1.36
SMG6-216ENST00000575176 PRNDQ9UKY0 176 aa6.57□□□□□ -1.36
SMG6-216ENST00000575176 ZNF256Q9Y2P7 627 aaPredicted RBP6.57□□□□□ -1.36
SMG6-216ENST00000575176 TMEM56-RWDD3S4R434 201 aa6.57□□□□□ -1.36
SMG6-216ENST00000575176 PLECQ15149 4684 aaKnown RBP6.56□□□□□ -1.36
SMG6-216ENST00000575176 LGALS9O00182 355 aa6.56□□□□□ -1.36
SMG6-216ENST00000575176 ST8SIA3O43173 380 aa6.56□□□□□ -1.36
SMG6-216ENST00000575176 IFNA6P05013 189 aa6.56□□□□□ -1.36
SMG6-216ENST00000575176 TRAPPC2P0DI81 140 aa6.56□□□□□ -1.36
SMG6-216ENST00000575176 TRAPPC2BP0DI82 140 aa6.56□□□□□ -1.36
SMG6-216ENST00000575176 OR13C7P0DN81 318 aa6.56□□□□□ -1.36
SMG6-216ENST00000575176 HIST1H1BP16401 226 aaKnown RBP6.56□□□□□ -1.36
SMG6-216ENST00000575176 CD40LGP29965 261 aa6.56□□□□□ -1.36
SMG6-216ENST00000575176 ECI1P42126 302 aa6.56□□□□□ -1.36
SMG6-216ENST00000575176 ERVK-16P61578 105 aa6.56□□□□□ -1.36
SMG6-216ENST00000575176 ATP5G2Q06055 141 aa6.56□□□□□ -1.36
SMG6-216ENST00000575176 NMSQ5H8A3 153 aa6.56□□□□□ -1.36
SMG6-216ENST00000575176 HSD17B13Q7Z5P4 300 aaPredicted RBP6.56□□□□□ -1.36
SMG6-216ENST00000575176 SELENOHQ8IZQ5 122 aaKnown RBP6.56□□□□□ -1.36
SMG6-216ENST00000575176 Q8N402 240 aa6.56□□□□□ -1.36
SMG6-216ENST00000575176 CACNG8Q8WXS5 425 aa6.56□□□□□ -1.36
SMG6-216ENST00000575176 PRRT1Q99946 306 aa6.56□□□□□ -1.36
SMG6-216ENST00000575176 CHRDL1Q9BU40 450 aa6.56□□□□□ -1.36
SMG6-216ENST00000575176 ZNF436Q9C0F3 470 aaPredicted RBP6.56□□□□□ -1.36
SMG6-216ENST00000575176 MRPL36Q9P0J6 103 aaKnown RBP6.56□□□□□ -1.36
SMG6-216ENST00000575176 RYR2Q92736 4967 aa6.56□□□□□ -1.36
SMG6-216ENST00000575176 C2orf70A6NJV1 201 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 DISC1C4P0D8 188 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 RNASE2P10153 161 aaKnown RBP6.55□□□□□ -1.36
SMG6-216ENST00000575176 GP9P14770 177 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 FCGR2BP31994 310 aaPredicted RBP6.55□□□□□ -1.36
SMG6-216ENST00000575176 GPR183P32249 361 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 HSPE1P61604 102 aaKnown RBP6.55□□□□□ -1.36
SMG6-216ENST00000575176 DHODHQ02127 395 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 SPINK9Q5DT21 86 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 FAM209BQ5JX69 171 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 CLEC19AQ6UXS0 136 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 GPHB5Q86YW7 130 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 CCDC71LQ8N9Z2 235 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 OR1P1Q8NH06 330 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 ZFAND1Q8TCF1 268 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 VN1R17PQ8TDU5 208 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 SCARB1Q8WTV0 552 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 TMEM190Q8WZ59 177 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 RBPMSQ93062 196 aaKnown RBP6.55□□□□□ -1.36
SMG6-216ENST00000575176 TSC22D3Q99576 134 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 FNDC4Q9H6D8 234 aaPredicted RBP6.55□□□□□ -1.36
SMG6-216ENST00000575176 COPZ2Q9P299 210 aa6.55□□□□□ -1.36
SMG6-216ENST00000575176 TRBV7-1A0A0A6YYK4 115 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 TEX13DA0A0J9YY54 714 aaPredicted RBP6.54□□□□□ -1.36
SMG6-216ENST00000575176 CCDC160A6NGH7 325 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 A6NHS1 94 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 TGOLN2O43493 480 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 GGCTO75223 188 aaKnown RBP6.54□□□□□ -1.36
SMG6-216ENST00000575176 B3GALNT1O75752 331 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 OR2C1O95371 312 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 C8orf88P0DMB2 117 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 ARL3P36405 182 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 RPEL1Q2QD12 228 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 ANKRD55Q3KP44 614 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 PYDC2Q56P42 97 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 H2BFWTQ7Z2G1 175 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 SLC35G3Q8N808 338 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 DEDD2Q8WXF8 326 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 IL22RA2Q969J5 263 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 EEF1AKMT3Q96AZ1 226 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 GPR146Q96CH1 333 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 ATP6V0BQ99437 205 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 C19orf73Q9NVV2 129 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 MLXQ9UH92 298 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 TENM2Q9NT68 2774 aa6.54□□□□□ -1.36
SMG6-216ENST00000575176 DNAH1Q9P2D7 4330 aa6.53□□□□□ -1.36
SMG6-216ENST00000575176 IGHV3-21A0A0B4J1V1 117 aa6.53□□□□□ -1.36
SMG6-216ENST00000575176 ZNF785A8K8V0 405 aa6.53□□□□□ -1.36
SMG6-216ENST00000575176 A8MZ25 164 aa6.53□□□□□ -1.36
SMG6-216ENST00000575176 PITX3O75364 302 aa6.53□□□□□ -1.36
SMG6-216ENST00000575176 SNAPC5O75971 98 aa6.53□□□□□ -1.36
SMG6-216ENST00000575176 CTSGP08311 255 aa6.53□□□□□ -1.36
SMG6-216ENST00000575176 IL7P13232 177 aa6.53□□□□□ -1.36
SMG6-216ENST00000575176 AKR1C2P52895 323 aa6.53□□□□□ -1.36
SMG6-216ENST00000575176 CD300EQ496F6 205 aaPredicted RBP6.53□□□□□ -1.36
SMG6-216ENST00000575176 FAM219AQ8IW50 185 aa6.53□□□□□ -1.36
SMG6-216ENST00000575176 LRTM2Q8N967 370 aa6.53□□□□□ -1.36
SMG6-216ENST00000575176 CXorf58Q96LI9 332 aa6.53□□□□□ -1.36
SMG6-216ENST00000575176 FKBP11Q9NYL4 201 aa6.53□□□□□ -1.36
SMG6-216ENST00000575176 CACNG5Q9UF02 275 aa6.53□□□□□ -1.36
SMG6-216ENST00000575176 C14orf166Q9Y224 244 aaKnown RBP6.53□□□□□ -1.36
SMG6-216ENST00000575176 IGHV3-35A0A0C4DH35 117 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 OR2T8A6NH00 312 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 PLA2G10O15496 165 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 DHFRP00374 187 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 MT-CO2P00403 227 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 CLEC3BP05452 202 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 FOLR2P14207 255 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 S100GP29377 79 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 CCR6P51684 374 aa6.52□□□□□ -1.37
SMG6-216ENST00000575176 PPP1R1AQ13522 171 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms