RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 PRCDQ00LT1 54 aa21.12■□□□□ 0.97
SCARF1-207ENST00000573867 SPINK9Q5DT21 86 aa21.12■□□□□ 0.97
SCARF1-207ENST00000573867 SLC25A24Q6NUK1 477 aa21.12■□□□□ 0.97
SCARF1-207ENST00000573867 ADAMTSL5Q6ZMM2 481 aa21.12■□□□□ 0.97
SCARF1-207ENST00000573867 TMEM56Q96MV1 263 aa21.12■□□□□ 0.97
SCARF1-207ENST00000573867 SRRQ9GZT4 340 aa21.12■□□□□ 0.97
SCARF1-207ENST00000573867 COL7A1Q02388 2944 aa21.11■□□□□ 0.97
SCARF1-207ENST00000573867 TEX13DA0A0J9YY54 714 aaPredicted RBP21.11■□□□□ 0.97
SCARF1-207ENST00000573867 GGCTO75223 188 aaKnown RBP21.11■□□□□ 0.97
SCARF1-207ENST00000573867 B3GALNT1O75752 331 aa21.11■□□□□ 0.97
SCARF1-207ENST00000573867 CDS2O95674 445 aa21.11■□□□□ 0.97
SCARF1-207ENST00000573867 ARL3P36405 182 aa21.11■□□□□ 0.97
SCARF1-207ENST00000573867 MECP2P51608 486 aaKnown RBP21.11■□□□□ 0.97
SCARF1-207ENST00000573867 FAM209BQ5JX69 171 aa21.11■□□□□ 0.97
SCARF1-207ENST00000573867 Q6ZRM9 215 aa21.11■□□□□ 0.97
SCARF1-207ENST00000573867 CXorf58Q96LI9 332 aa21.11■□□□□ 0.97
SCARF1-207ENST00000573867 ZC4H2Q9NQZ6 224 aa21.11■□□□□ 0.97
SCARF1-207ENST00000573867 TRBV7-1A0A0A6YYK4 115 aa21.1■□□□□ 0.97
SCARF1-207ENST00000573867 TATDN3Q17R31 274 aa21.1■□□□□ 0.97
SCARF1-207ENST00000573867 TOMM5Q8N4H5 51 aa21.1■□□□□ 0.97
SCARF1-207ENST00000573867 OR2C3Q8N628 320 aa21.1■□□□□ 0.97
SCARF1-207ENST00000573867 PRR13Q9NZ81 148 aa21.1■□□□□ 0.97
SCARF1-207ENST00000573867 IGHV3-21A0A0B4J1V1 117 aa21.09■□□□□ 0.97
SCARF1-207ENST00000573867 ST8SIA3O43173 380 aa21.09■□□□□ 0.97
SCARF1-207ENST00000573867 CLEC3BP05452 202 aa21.09■□□□□ 0.97
SCARF1-207ENST00000573867 GP9P14770 177 aa21.09■□□□□ 0.97
SCARF1-207ENST00000573867 GPR183P32249 361 aa21.09■□□□□ 0.97
SCARF1-207ENST00000573867 SELENOHQ8IZQ5 122 aaKnown RBP21.09■□□□□ 0.97
SCARF1-207ENST00000573867 K7EIM0 57 aa21.08■□□□□ 0.97
SCARF1-207ENST00000573867 SUPT4H1P63272 117 aaKnown RBP21.08■□□□□ 0.97
SCARF1-207ENST00000573867 SPANXN2Q5MJ10 180 aa21.08■□□□□ 0.97
SCARF1-207ENST00000573867 VN1R17PQ8TDU5 208 aa21.08■□□□□ 0.97
SCARF1-207ENST00000573867 SIGLEC8Q9NYZ4 499 aa21.08■□□□□ 0.97
SCARF1-207ENST00000573867 THYN1Q9P016 225 aa21.08■□□□□ 0.97
SCARF1-207ENST00000573867 F8W735 103 aaPredicted RBP21.07■□□□□ 0.96
SCARF1-207ENST00000573867 ATG12O94817 140 aa21.07■□□□□ 0.96
SCARF1-207ENST00000573867 AP3S2P59780 193 aa21.07■□□□□ 0.96
SCARF1-207ENST00000573867 TMEM187Q14656 261 aa21.07■□□□□ 0.96
SCARF1-207ENST00000573867 GPHB5Q86YW7 130 aa21.07■□□□□ 0.96
SCARF1-207ENST00000573867 OR1P1Q8NH06 330 aa21.07■□□□□ 0.96
SCARF1-207ENST00000573867 RBPMSQ93062 196 aaKnown RBP21.07■□□□□ 0.96
SCARF1-207ENST00000573867 SDHCQ99643 169 aaPredicted RBP21.07■□□□□ 0.96
SCARF1-207ENST00000573867 NDUFA13Q9P0J0 144 aa21.07■□□□□ 0.96
SCARF1-207ENST00000573867 FAUP35544 74 aaKnown RBP21.06■□□□□ 0.96
SCARF1-207ENST00000573867 DHODHQ02127 395 aa21.06■□□□□ 0.96
SCARF1-207ENST00000573867 BAK1Q16611 211 aa21.06■□□□□ 0.96
SCARF1-207ENST00000573867 TMEM268Q5VZI3 342 aa21.06■□□□□ 0.96
SCARF1-207ENST00000573867 ZNF114Q8NC26 417 aa21.06■□□□□ 0.96
SCARF1-207ENST00000573867 SCARB1Q8WTV0 552 aa21.06■□□□□ 0.96
SCARF1-207ENST00000573867 RRNAD1Q96FB5 475 aaKnown RBP21.06■□□□□ 0.96
SCARF1-207ENST00000573867 GALNT14Q96FL9 552 aa21.06■□□□□ 0.96
SCARF1-207ENST00000573867 PLEKHA3Q9HB20 300 aa21.06■□□□□ 0.96
SCARF1-207ENST00000573867 PEMTQ9UBM1 199 aa21.06■□□□□ 0.96
SCARF1-207ENST00000573867 TMEM56-RWDD3S4R434 201 aa21.06■□□□□ 0.96
SCARF1-207ENST00000573867 IZUMO1RA6ND01 250 aa21.05■□□□□ 0.96
SCARF1-207ENST00000573867 CYB5BO43169 146 aa21.05■□□□□ 0.96
SCARF1-207ENST00000573867 SGPP2Q8IWX5 399 aa21.05■□□□□ 0.96
SCARF1-207ENST00000573867 GPR146Q96CH1 333 aa21.05■□□□□ 0.96
SCARF1-207ENST00000573867 SCGB3A2Q96PL1 93 aa21.05■□□□□ 0.96
SCARF1-207ENST00000573867 B9D2Q9BPU9 175 aa21.05■□□□□ 0.96
SCARF1-207ENST00000573867 SORL1Q92673 2214 aa21.05■□□□□ 0.96
SCARF1-207ENST00000573867 C2orf70A6NJV1 201 aa21.04■□□□□ 0.96
SCARF1-207ENST00000573867 LGALS9O00182 355 aa21.04■□□□□ 0.96
SCARF1-207ENST00000573867 AKR1C4P17516 323 aa21.04■□□□□ 0.96
SCARF1-207ENST00000573867 UNQ9165/PRO28630Q6UXU0 137 aa21.04■□□□□ 0.96
SCARF1-207ENST00000573867 RNASE11Q8TAA1 199 aaKnown RBP21.04■□□□□ 0.96
SCARF1-207ENST00000573867 IGHV3-35A0A0C4DH35 117 aa21.03■□□□□ 0.96
SCARF1-207ENST00000573867 TGOLN2O43493 480 aa21.03■□□□□ 0.96
SCARF1-207ENST00000573867 IFNA17P01571 189 aa21.03■□□□□ 0.96
SCARF1-207ENST00000573867 AARDQ4LEZ3 155 aa21.03■□□□□ 0.96
SCARF1-207ENST00000573867 OR1L6Q8NGR2 347 aa21.03■□□□□ 0.96
SCARF1-207ENST00000573867 CACNG8Q8WXS5 425 aa21.03■□□□□ 0.96
SCARF1-207ENST00000573867 C21orf62Q9NYP8 219 aa21.03■□□□□ 0.96
SCARF1-207ENST00000573867 TMEM213A2RRL7 107 aa21.02■□□□□ 0.96
SCARF1-207ENST00000573867 OR2T8A6NH00 312 aa21.02■□□□□ 0.96
SCARF1-207ENST00000573867 INS-IGF2F8WCM5 200 aa21.02■□□□□ 0.96
SCARF1-207ENST00000573867 I3L2K1 104 aa21.02■□□□□ 0.96
SCARF1-207ENST00000573867 DCTN2Q13561 401 aaKnown RBP21.02■□□□□ 0.96
SCARF1-207ENST00000573867 ZNF57Q68EA5 555 aaPredicted RBP21.02■□□□□ 0.96
SCARF1-207ENST00000573867 FAM219AQ8IW50 185 aa21.02■□□□□ 0.96
SCARF1-207ENST00000573867 SLC35G3Q8N808 338 aa21.02■□□□□ 0.96
SCARF1-207ENST00000573867 MISP3Q96FF7 219 aa21.02■□□□□ 0.96
SCARF1-207ENST00000573867 ZNF414Q96IQ9 312 aa21.02■□□□□ 0.96
SCARF1-207ENST00000573867 CHRDL1Q9BU40 450 aa21.02■□□□□ 0.96
SCARF1-207ENST00000573867 FOLR2P14207 255 aa21.01■□□□□ 0.95
SCARF1-207ENST00000573867 ERHP84090 104 aaKnown RBP21.01■□□□□ 0.95
SCARF1-207ENST00000573867 PLET1Q6UQ28 207 aa21.01■□□□□ 0.95
SCARF1-207ENST00000573867 Q8N1Y9 231 aa21.01■□□□□ 0.95
SCARF1-207ENST00000573867 DEDD2Q8WXF8 326 aa21.01■□□□□ 0.95
SCARF1-207ENST00000573867 CACNG5Q9UF02 275 aa21.01■□□□□ 0.95
SCARF1-207ENST00000573867 KCNIP3Q9Y2W7 256 aa21.01■□□□□ 0.95
SCARF1-207ENST00000573867 A8MWP6 167 aa21■□□□□ 0.95
SCARF1-207ENST00000573867 IGHV3-48P01763 117 aa21■□□□□ 0.95
SCARF1-207ENST00000573867 ADMP35318 185 aa21■□□□□ 0.95
SCARF1-207ENST00000573867 CD69Q07108 199 aa21■□□□□ 0.95
SCARF1-207ENST00000573867 TMED4Q7Z7H5 227 aa21■□□□□ 0.95
SCARF1-207ENST00000573867 IL22RA2Q969J5 263 aa21■□□□□ 0.95
SCARF1-207ENST00000573867 SELENOKQ9Y6D0 94 aa21■□□□□ 0.95
SCARF1-207ENST00000573867 ZNF320A2RRD8 509 aa20.99■□□□□ 0.95
SCARF1-207ENST00000573867 CD300EQ496F6 205 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms