RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 ZFAND1Q8TCF1 268 aa13.44□□□□□ -0.26
CTDNEP1-207ENST00000572043 VN1R17PQ8TDU5 208 aa13.44□□□□□ -0.26
CTDNEP1-207ENST00000572043 SMIM4Q8WVI0 70 aa13.44□□□□□ -0.26
CTDNEP1-207ENST00000572043 WDR89Q96FK6 387 aaPredicted RBP13.44□□□□□ -0.26
CTDNEP1-207ENST00000572043 RCHY1Q96PM5 261 aa13.44□□□□□ -0.26
CTDNEP1-207ENST00000572043 THAP7Q9BT49 309 aaPredicted RBP13.44□□□□□ -0.26
CTDNEP1-207ENST00000572043 SLIRPQ9GZT3 109 aaKnown RBP13.44□□□□□ -0.26
CTDNEP1-207ENST00000572043 CCDC160A6NGH7 325 aa13.43□□□□□ -0.26
CTDNEP1-207ENST00000572043 TGOLN2O43493 480 aa13.43□□□□□ -0.26
CTDNEP1-207ENST00000572043 IGKV1-5P01602 117 aa13.43□□□□□ -0.26
CTDNEP1-207ENST00000572043 AKR1C2P52895 323 aa13.43□□□□□ -0.26
CTDNEP1-207ENST00000572043 MEF2DQ14814 521 aa13.43□□□□□ -0.26
CTDNEP1-207ENST00000572043 CCDC71LQ8N9Z2 235 aa13.43□□□□□ -0.26
CTDNEP1-207ENST00000572043 UXS1Q8NBZ7 420 aa13.43□□□□□ -0.26
CTDNEP1-207ENST00000572043 SCARB1Q8WTV0 552 aa13.43□□□□□ -0.26
CTDNEP1-207ENST00000572043 MISP3Q96FF7 219 aa13.43□□□□□ -0.26
CTDNEP1-207ENST00000572043 TUBA4BQ9H853 241 aa13.43□□□□□ -0.26
CTDNEP1-207ENST00000572043 PLEKHA3Q9HB20 300 aa13.43□□□□□ -0.26
CTDNEP1-207ENST00000572043 C19orf73Q9NVV2 129 aa13.43□□□□□ -0.26
CTDNEP1-207ENST00000572043 C21orf62Q9NYP8 219 aa13.43□□□□□ -0.26
CTDNEP1-207ENST00000572043 ZNF785A8K8V0 405 aa13.42□□□□□ -0.26
CTDNEP1-207ENST00000572043 DISC1C4P0D8 188 aa13.42□□□□□ -0.26
CTDNEP1-207ENST00000572043 CD7P09564 240 aa13.42□□□□□ -0.26
CTDNEP1-207ENST00000572043 PRCDQ00LT1 54 aa13.42□□□□□ -0.26
CTDNEP1-207ENST00000572043 SSBP1Q04837 148 aaKnown RBP13.42□□□□□ -0.26
CTDNEP1-207ENST00000572043 Q56UQ5 140 aa13.42□□□□□ -0.26
CTDNEP1-207ENST00000572043 BTNL8Q6UX41 500 aa13.42□□□□□ -0.26
CTDNEP1-207ENST00000572043 OR4C16Q8NGL9 310 aa13.42□□□□□ -0.26
CTDNEP1-207ENST00000572043 MCFD2Q8NI22 146 aa13.42□□□□□ -0.26
CTDNEP1-207ENST00000572043 NEURL2Q9BR09 285 aa13.42□□□□□ -0.26
CTDNEP1-207ENST00000572043 ZMAT4Q9H898 229 aa13.42□□□□□ -0.26
CTDNEP1-207ENST00000572043 MLXQ9UH92 298 aa13.42□□□□□ -0.26
CTDNEP1-207ENST00000572043 CEPT1Q9Y6K0 416 aa13.42□□□□□ -0.26
CTDNEP1-207ENST00000572043 IGHV3OR16-8A0A075B7F1 116 aa13.41□□□□□ -0.26
CTDNEP1-207ENST00000572043 K7EIM0 57 aa13.41□□□□□ -0.26
CTDNEP1-207ENST00000572043 CTDSPLO15194 276 aa13.41□□□□□ -0.26
CTDNEP1-207ENST00000572043 IGHV3-48P01763 117 aa13.41□□□□□ -0.26
CTDNEP1-207ENST00000572043 CTSDP07339 412 aaPredicted RBP13.41□□□□□ -0.26
CTDNEP1-207ENST00000572043 AKAIN1P0CW23 69 aa13.41□□□□□ -0.26
CTDNEP1-207ENST00000572043 HSPE1P61604 102 aaKnown RBP13.41□□□□□ -0.26
CTDNEP1-207ENST00000572043 ZNF57Q68EA5 555 aaPredicted RBP13.41□□□□□ -0.26
CTDNEP1-207ENST00000572043 OR2C3Q8N628 320 aa13.41□□□□□ -0.26
CTDNEP1-207ENST00000572043 RNASE11Q8TAA1 199 aaKnown RBP13.41□□□□□ -0.26
CTDNEP1-207ENST00000572043 CHRDL1Q9BU40 450 aa13.41□□□□□ -0.26
CTDNEP1-207ENST00000572043 WFDC10AQ9H1F0 79 aa13.41□□□□□ -0.26
CTDNEP1-207ENST00000572043 SLC2A8Q9NY64 477 aa13.41□□□□□ -0.26
CTDNEP1-207ENST00000572043 TECRQ9NZ01 308 aaKnown RBP13.41□□□□□ -0.26
CTDNEP1-207ENST00000572043 C14orf166Q9Y224 244 aaKnown RBP13.41□□□□□ -0.26
CTDNEP1-207ENST00000572043 FABP12A6NFH5 140 aa13.4□□□□□ -0.26
CTDNEP1-207ENST00000572043 A8MWP6 167 aa13.4□□□□□ -0.26
CTDNEP1-207ENST00000572043 SCAF4O95104 1147 aaKnown RBP13.4□□□□□ -0.26
CTDNEP1-207ENST00000572043 OR5AC1P0C628 307 aa13.4□□□□□ -0.26
CTDNEP1-207ENST00000572043 TNFSF8P32971 234 aa13.4□□□□□ -0.26
CTDNEP1-207ENST00000572043 TMEM61Q8N0U2 210 aa13.4□□□□□ -0.26
CTDNEP1-207ENST00000572043 OR1L6Q8NGR2 347 aa13.4□□□□□ -0.26
CTDNEP1-207ENST00000572043 OR1P1Q8NH06 330 aa13.4□□□□□ -0.26
CTDNEP1-207ENST00000572043 PINX1Q96BK5 328 aaKnown RBP13.4□□□□□ -0.26
CTDNEP1-207ENST00000572043 C20orf24Q9BUV8 137 aa13.4□□□□□ -0.26
CTDNEP1-207ENST00000572043 PALMDQ9NP74 551 aa13.4□□□□□ -0.26
CTDNEP1-207ENST00000572043 UFC1Q9Y3C8 167 aa13.4□□□□□ -0.26
CTDNEP1-207ENST00000572043 A0A0B4J293 547 aa13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 A0A0G2JRQ6 117 aa13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 TEX13DA0A0J9YY54 714 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 A8MZ25 164 aa13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 F8W735 103 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 ST8SIA3O43173 380 aa13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 ATG12O94817 140 aa13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 IFNA17P01571 189 aa13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 ERHP84090 104 aaKnown RBP13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 DEFB125Q8N687 156 aa13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 SLC35G3Q8N808 338 aa13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 OR51S1Q8NGJ8 323 aa13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 BSCL2Q96G97 398 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 RTBDNQ9BSG5 229 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 ZNF436Q9C0F3 470 aaPredicted RBP13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 C5orf66Q9H5L9 145 aa13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 MCUBQ9NWR8 336 aa13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 RSL24D1Q9UHA3 163 aaKnown RBP13.39□□□□□ -0.27
CTDNEP1-207ENST00000572043 ZNF207O43670 478 aaKnown RBP13.38□□□□□ -0.27
CTDNEP1-207ENST00000572043 MT-CO2P00403 227 aa13.38□□□□□ -0.27
CTDNEP1-207ENST00000572043 P0C879 139 aa13.38□□□□□ -0.27
CTDNEP1-207ENST00000572043 UCP1P25874 307 aa13.38□□□□□ -0.27
CTDNEP1-207ENST00000572043 TMEM190Q8WZ59 177 aa13.38□□□□□ -0.27
CTDNEP1-207ENST00000572043 RRNAD1Q96FB5 475 aaKnown RBP13.38□□□□□ -0.27
CTDNEP1-207ENST00000572043 TM2D3Q9BRN9 247 aa13.38□□□□□ -0.27
CTDNEP1-207ENST00000572043 PDCD10Q9BUL8 212 aa13.38□□□□□ -0.27
CTDNEP1-207ENST00000572043 NAA60Q9H7X0 242 aa13.38□□□□□ -0.27
CTDNEP1-207ENST00000572043 RABL2AQ9UBK7 228 aaPredicted RBP13.38□□□□□ -0.27
CTDNEP1-207ENST00000572043 RABL2BQ9UNT1 228 aa13.38□□□□□ -0.27
CTDNEP1-207ENST00000572043 ANKRD20A5PA0PJZ0 165 aa13.37□□□□□ -0.27
CTDNEP1-207ENST00000572043 I3L2K1 104 aa13.37□□□□□ -0.27
CTDNEP1-207ENST00000572043 GSTZ1O43708 216 aaPredicted RBP13.37□□□□□ -0.27
CTDNEP1-207ENST00000572043 ADMP35318 185 aa13.37□□□□□ -0.27
CTDNEP1-207ENST00000572043 ETV6P41212 452 aa13.37□□□□□ -0.27
CTDNEP1-207ENST00000572043 HOXA1P49639 335 aaPredicted RBP13.37□□□□□ -0.27
CTDNEP1-207ENST00000572043 HAGHQ16775 308 aa13.37□□□□□ -0.27
CTDNEP1-207ENST00000572043 LHFPL5Q8TAF8 219 aa13.37□□□□□ -0.27
CTDNEP1-207ENST00000572043 PRRT1Q99946 306 aa13.37□□□□□ -0.27
CTDNEP1-207ENST00000572043 NXF2Q9GZY0 626 aaKnown RBP13.37□□□□□ -0.27
CTDNEP1-207ENST00000572043 MRPL27Q9P0M9 148 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms