RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 DNAH9Q9NYC9 4486 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.35□□□□□ -1.55
SMG6-209ENST00000571442 C13orf42A0A1B0GVH6 325 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 C9orf170A2RU37 121 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 NAP1L6A6NFF2 107 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 FAM223BA6NKX1 122 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 MPTX1A8MV57 137 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 K7EIM0 57 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 BMPR1BO00238 502 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 UPK1BO75841 260 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 VAMP1P23763 118 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 INPP1P49441 399 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 UBE2MP61081 183 aaKnown RBP5.35□□□□□ -1.55
SMG6-209ENST00000571442 ATP5G2Q06055 141 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 AARDQ4LEZ3 155 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 TMEM128Q5BJH2 165 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 KPRPQ5T749 579 aaPredicted RBP5.35□□□□□ -1.55
SMG6-209ENST00000571442 HAPLN4Q86UW8 402 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 FAM219AQ8IW50 185 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 FAM223AQ8IWN6 122 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 CENPSQ8N2Z9 138 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 NECAP1Q8NC96 275 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 OR5B3Q8NH48 314 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 TMEM170AQ8WVE7 144 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 S100ZQ8WXG8 99 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 LSM10Q969L4 123 aaKnown RBP5.35□□□□□ -1.55
SMG6-209ENST00000571442 SCGB3A2Q96PL1 93 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 TSC22D3Q99576 134 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 C7orf50Q9BRJ6 194 aaKnown RBP5.35□□□□□ -1.55
SMG6-209ENST00000571442 SRSF8Q9BRL6 282 aaKnown RBP5.35□□□□□ -1.55
SMG6-209ENST00000571442 ZC4H2Q9NQZ6 224 aa5.35□□□□□ -1.55
SMG6-209ENST00000571442 F11RQ9Y624 299 aaKnown RBP5.35□□□□□ -1.55
SMG6-209ENST00000571442 TRAV6A0A075B6T7 132 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 A0A0B4J2A0 478 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 PITX3O75364 302 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 ADAP1O75689 374 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 B3GALNT1O75752 331 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 IGHV3-48P01763 117 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 TCRBP04435 133 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 OR4E1P0C645 316 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 OR8U8P0C7N1 319 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 RNASE2P10153 161 aaKnown RBP5.34□□□□□ -1.55
SMG6-209ENST00000571442 MECP2P51608 486 aaKnown RBP5.34□□□□□ -1.55
SMG6-209ENST00000571442 DHRS2Q13268 280 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 ZNF846Q147U1 533 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 MLANAQ16655 118 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 PVRIGQ6DKI7 326 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 SLC25A24Q6NUK1 477 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 CLEC19AQ6UXS0 136 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 IL34Q6ZMJ4 242 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 ADAMTSL5Q6ZMM2 481 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 LGI3Q8N145 548 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 LRTM2Q8N967 370 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 RNASE11Q8TAA1 199 aaKnown RBP5.34□□□□□ -1.55
SMG6-209ENST00000571442 ZNF502Q8TBZ5 544 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 DPF1Q92782 380 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 IL22RA2Q969J5 263 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 RRNAD1Q96FB5 475 aaKnown RBP5.34□□□□□ -1.55
SMG6-209ENST00000571442 RCC1LQ96I51 464 aaKnown RBP5.34□□□□□ -1.55
SMG6-209ENST00000571442 USMG5Q96IX5 58 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 C20orf85Q9H1P6 137 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 MRPL36Q9P0J6 103 aaKnown RBP5.34□□□□□ -1.55
SMG6-209ENST00000571442 PEF1Q9UBV8 284 aaKnown RBP5.34□□□□□ -1.55
SMG6-209ENST00000571442 SHPKQ9UHJ6 478 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 KCNIP3Q9Y2W7 256 aa5.34□□□□□ -1.55
SMG6-209ENST00000571442 A0A0G2JLM5 398 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 SEC14L6B5MCN3 397 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 INS-IGF2F8WCM5 200 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 I3L2K1 104 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 OVOL1O14753 267 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 OR2C1O95371 312 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 IFNA17P01571 189 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 HOXB5P09067 269 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 DEFA4P12838 97 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 SPNP16150 400 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 GPR183P32249 361 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 SYNJ2BPP57105 145 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 EGFEM1PQ0D2K5 195 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 ASAH1Q13510 395 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 KLF5Q13887 457 aaPredicted RBP5.33□□□□□ -1.56
SMG6-209ENST00000571442 BSXQ3C1V8 233 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 GGNBP1Q5YKI7 109 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 THOC7Q6I9Y2 204 aaKnown RBP5.33□□□□□ -1.56
SMG6-209ENST00000571442 LYG2Q86SG7 212 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 ZNF114Q8NC26 417 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 SCARB1Q8WTV0 552 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 SEC22CQ9BRL7 303 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 WDR12Q9GZL7 423 aaKnown RBP5.33□□□□□ -1.56
SMG6-209ENST00000571442 FNDC4Q9H6D8 234 aaPredicted RBP5.33□□□□□ -1.56
SMG6-209ENST00000571442 PLEKHA3Q9HB20 300 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 RANGRFQ9HD47 186 aaPredicted RBP5.33□□□□□ -1.56
SMG6-209ENST00000571442 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.33□□□□□ -1.56
SMG6-209ENST00000571442 NUDT15Q9NV35 164 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 AURKAIP1Q9NWT8 199 aaPredicted RBP5.33□□□□□ -1.56
SMG6-209ENST00000571442 FKBP11Q9NYL4 201 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 SELENOKQ9Y6D0 94 aa5.33□□□□□ -1.56
SMG6-209ENST00000571442 IGHV3-35A0A0C4DH35 117 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 WI2-2373I1.2A0A1W2PRP0 233 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 CENPXA8MT69 81 aa5.32□□□□□ -1.56
SMG6-209ENST00000571442 CCSO14618 274 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms