RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ZNF471Q9BX82 626 aaPredicted RBP2.9□□□□□ -1.95
SMG6-208ENST00000570874 SMIM3Q9BZL3 60 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 LPAR5Q9H1C0 372 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 OR2D2Q9H210 308 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 HEXA-AS1Q9H8Q6 139 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 SEC61A2Q9H9S3 476 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 RNF122Q9H9V4 155 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 PNRC2Q9NPJ4 139 aaKnown RBP2.9□□□□□ -1.95
SMG6-208ENST00000570874 UQCC1Q9NVA1 299 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 NAT8Q9UHE5 227 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 BOKQ9UMX3 212 aaPredicted RBP2.9□□□□□ -1.95
SMG6-208ENST00000570874 FLVCR1Q9Y5Y0 555 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 LOC400499M0QZD8 3231 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 ICE1Q9Y2F5 2266 aa2.9□□□□□ -1.95
SMG6-208ENST00000570874 CACNA1GO43497 2377 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 DCHS1Q96JQ0 3298 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 MUC6Q6W4X9 2439 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 TRGV11A0A075B6L2 103 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 TEX50A0A1B0GTY4 177 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 A6NDN8 102 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 ZNF503-AS2A6NEH8 195 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 GAGE12JA6NER3 117 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 ZNF726A6NNF4 738 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 FABP5P3A8MUU1 101 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 MCRIP1C9JLW8 97 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 K7EMT4 169 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 FCN1O00602 326 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 DHRS3O75911 302 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 GAGE7O76087 117 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 NDUFB6O95139 128 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 NDUFC2O95298 119 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 CLDN14O95500 239 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 MOSP00540 346 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 IGHV2-5P01817 119 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 IGHG1P01857 330 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 AMBPP02760 352 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 MAS1P04201 325 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 FGF2P09038 288 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 FAM157CP0CG43 387 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 GAGE12FP0CL80 117 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 GAGE12GP0CL81 117 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 GAGE12IP0CL82 117 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 PTHLHP12272 177 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 ZNF823P16415 610 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 ZNF708P17019 499 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 BLVRBP30043 206 aaPredicted RBP2.89□□□□□ -1.95
SMG6-208ENST00000570874 SRIP30626 198 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 BRS3P32247 399 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 BTCP35070 178 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 GNG4P50150 75 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 EIF5AP63241 154 aaKnown RBP2.89□□□□□ -1.95
SMG6-208ENST00000570874 RHOGP84095 191 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 CYCSP99999 105 aaKnown RBP2.89□□□□□ -1.95
SMG6-208ENST00000570874 CACNA1DQ01668 2161 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 FABP9Q0Z7S8 132 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 GAGE4Q13068 117 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 KLF9Q13886 244 aaPredicted RBP2.89□□□□□ -1.95
SMG6-208ENST00000570874 ZNF345Q14585 488 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 RBMS2Q15434 407 aaKnown RBP2.89□□□□□ -1.95
SMG6-208ENST00000570874 LGALSLQ3ZCW2 172 aaPredicted RBP2.89□□□□□ -1.95
SMG6-208ENST00000570874 VAX1Q5SQQ9 334 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 BCL2L15Q5TBC7 163 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 ZNF626Q68DY1 528 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 SP5Q6BEB4 398 aaPredicted RBP2.89□□□□□ -1.95
SMG6-208ENST00000570874 FBXW12Q6X9E4 464 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 STAC2Q6ZMT1 411 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 FOXL2NBQ6ZUU3 175 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 AAED1Q7RTV5 226 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 NEGR1Q7Z3B1 354 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 LRRTM1Q86UE6 522 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 PPP1R27Q86WC6 154 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 C20orf196Q8IYI0 205 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 OR8I2Q8N0Y5 310 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 GAPTQ8N292 157 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 GBGT1Q8N5D6 347 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 ZNF433Q8N7K0 673 aaPredicted RBP2.89□□□□□ -1.95
SMG6-208ENST00000570874 OR11H7Q8NGC8 314 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 OR8B12Q8NGG6 310 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 OR2T35Q8NGX2 323 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 OR1S1Q8NH92 325 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 OR1L1Q8NH94 360 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 C11orf45Q8TAV5 145 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 FNDC9Q8TBE3 224 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 ARPC1AQ92747 370 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 PLEKHB2Q96CS7 222 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 SLAMF6Q96DU3 332 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 GMPPAQ96IJ6 420 aaPredicted RBP2.89□□□□□ -1.95
SMG6-208ENST00000570874 TMEM101Q96IK0 257 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 SEC22AQ96IW7 307 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 LYZL4Q96KX0 146 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 RARRES2Q99969 163 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 NRIP2Q9BQI9 281 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 OR51I2Q9H344 312 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 HES4Q9HCC6 221 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 MBNL3Q9NUK0 354 aaKnown RBP2.89□□□□□ -1.95
SMG6-208ENST00000570874 TAS2R4Q9NYW5 299 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 ANXA10Q9UJ72 324 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 TMEM14AQ9Y6G1 99 aa2.89□□□□□ -1.95
SMG6-208ENST00000570874 R4GMQ9 66 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms