RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 RBMY1EA6NEQ0 496 aaKnown RBP12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 DBX1A6NMT0 343 aa12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 K7EIM0 57 aa12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 NDUFA4O00483 81 aa12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 CD74P04233 296 aa12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 RBMY1DP0C7P1 496 aaKnown RBP12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 ALDH3B2P48448 385 aa12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 PRCDQ00LT1 54 aa12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 SSBP1Q04837 148 aaKnown RBP12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 GUCA2BQ16661 112 aa12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 TM4SF20Q53R12 229 aa12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 SCARB1Q8WTV0 552 aa12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 MRPS26Q9BYN8 205 aaKnown RBP12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 C5orf66Q9H5L9 145 aa12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 DAZ1Q9NQZ3 744 aaKnown RBP12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 GAR1Q9NY12 217 aaKnown RBP12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 C21orf62Q9NYP8 219 aa12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 KLK11Q9UBX7 282 aa12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 NSG2Q9Y328 171 aa12.81□□□□□ -0.36
MAP1LC3B-208ENST00000570189 FAM25AB3EWG3 89 aa12.8□□□□□ -0.36
MAP1LC3B-208ENST00000570189 FAM25CB3EWG5 89 aa12.8□□□□□ -0.36
MAP1LC3B-208ENST00000570189 FAM25GB3EWG6 89 aa12.8□□□□□ -0.36
MAP1LC3B-208ENST00000570189 INS-IGF2F8WCM5 200 aa12.8□□□□□ -0.36
MAP1LC3B-208ENST00000570189 K7EMT4 169 aa12.8□□□□□ -0.36
MAP1LC3B-208ENST00000570189 P0C879 139 aa12.8□□□□□ -0.36
MAP1LC3B-208ENST00000570189 RNASE10Q5GAN6 216 aaKnown RBP12.8□□□□□ -0.36
MAP1LC3B-208ENST00000570189 H2BFWTQ7Z2G1 175 aa12.8□□□□□ -0.36
MAP1LC3B-208ENST00000570189 OR2C3Q8N628 320 aa12.8□□□□□ -0.36
MAP1LC3B-208ENST00000570189 DEFB125Q8N687 156 aa12.8□□□□□ -0.36
MAP1LC3B-208ENST00000570189 OR52I2Q8NH67 350 aa12.8□□□□□ -0.36
MAP1LC3B-208ENST00000570189 ABHD1Q96SE0 405 aa12.8□□□□□ -0.36
MAP1LC3B-208ENST00000570189 SRD5A3Q9H8P0 318 aa12.8□□□□□ -0.36
MAP1LC3B-208ENST00000570189 EXTL2Q9UBQ6 330 aa12.8□□□□□ -0.36
MAP1LC3B-208ENST00000570189 OR2T8A6NH00 312 aa12.79□□□□□ -0.36
MAP1LC3B-208ENST00000570189 M0QYG6 137 aa12.79□□□□□ -0.36
MAP1LC3B-208ENST00000570189 B3GALNT1O75752 331 aa12.79□□□□□ -0.36
MAP1LC3B-208ENST00000570189 CD3DP04234 171 aa12.79□□□□□ -0.36
MAP1LC3B-208ENST00000570189 ADMP35318 185 aa12.79□□□□□ -0.36
MAP1LC3B-208ENST00000570189 HSPE1P61604 102 aaKnown RBP12.79□□□□□ -0.36
MAP1LC3B-208ENST00000570189 MRPS10P82664 201 aaKnown RBP12.79□□□□□ -0.36
MAP1LC3B-208ENST00000570189 BTNL8Q6UX41 500 aa12.79□□□□□ -0.36
MAP1LC3B-208ENST00000570189 TMEM229BQ8NBD8 167 aa12.79□□□□□ -0.36
MAP1LC3B-208ENST00000570189 OR4A16Q8NH70 328 aa12.79□□□□□ -0.36
MAP1LC3B-208ENST00000570189 TXN2Q99757 166 aa12.79□□□□□ -0.36
MAP1LC3B-208ENST00000570189 SPAG8Q99932 426 aaPredicted RBP12.79□□□□□ -0.36
MAP1LC3B-208ENST00000570189 HINT2Q9BX68 163 aa12.79□□□□□ -0.36
MAP1LC3B-208ENST00000570189 RYR2Q92736 4967 aa12.78□□□□□ -0.36
MAP1LC3B-208ENST00000570189 C15orf62A8K5M9 175 aa12.78□□□□□ -0.36
MAP1LC3B-208ENST00000570189 GABARAPH6UMI1 98 aa12.78□□□□□ -0.36
MAP1LC3B-208ENST00000570189 I3L2K1 104 aa12.78□□□□□ -0.36
MAP1LC3B-208ENST00000570189 TSPAN4O14817 238 aa12.78□□□□□ -0.36
MAP1LC3B-208ENST00000570189 OR52B4Q8NGK2 314 aa12.78□□□□□ -0.36
MAP1LC3B-208ENST00000570189 MRGPRFQ96AM1 343 aa12.78□□□□□ -0.36
MAP1LC3B-208ENST00000570189 ZNF414Q96IQ9 312 aa12.78□□□□□ -0.36
MAP1LC3B-208ENST00000570189 FAM110AQ9BQ89 295 aa12.78□□□□□ -0.36
MAP1LC3B-208ENST00000570189 BCL7BQ9BQE9 202 aa12.78□□□□□ -0.36
MAP1LC3B-208ENST00000570189 CHRDL1Q9BU40 450 aa12.78□□□□□ -0.36
MAP1LC3B-208ENST00000570189 WFDC10AQ9H1F0 79 aa12.78□□□□□ -0.36
MAP1LC3B-208ENST00000570189 RABL2AQ9UBK7 228 aaPredicted RBP12.78□□□□□ -0.36
MAP1LC3B-208ENST00000570189 RABL2BQ9UNT1 228 aa12.78□□□□□ -0.36
MAP1LC3B-208ENST00000570189 SACSQ9NZJ4 4579 aa12.77□□□□□ -0.36
MAP1LC3B-208ENST00000570189 ATG12O94817 140 aa12.77□□□□□ -0.37
MAP1LC3B-208ENST00000570189 CTSGP08311 255 aa12.77□□□□□ -0.37
MAP1LC3B-208ENST00000570189 PIGPP57054 158 aa12.77□□□□□ -0.37
MAP1LC3B-208ENST00000570189 TAS2R19P59542 299 aa12.77□□□□□ -0.37
MAP1LC3B-208ENST00000570189 RBPMS2Q6ZRY4 209 aaKnown RBP12.77□□□□□ -0.37
MAP1LC3B-208ENST00000570189 GPR141Q7Z602 305 aa12.77□□□□□ -0.37
MAP1LC3B-208ENST00000570189 TERB2Q8NHR7 220 aa12.77□□□□□ -0.37
MAP1LC3B-208ENST00000570189 ZFAND1Q8TCF1 268 aa12.77□□□□□ -0.37
MAP1LC3B-208ENST00000570189 OR10C1Q96KK4 312 aa12.77□□□□□ -0.37
MAP1LC3B-208ENST00000570189 MIXL1Q9H2W2 232 aa12.77□□□□□ -0.37
MAP1LC3B-208ENST00000570189 TENM2Q9NT68 2774 aa12.77□□□□□ -0.37
MAP1LC3B-208ENST00000570189 RELQ04864 619 aaPredicted RBP12.76□□□□□ -0.37
MAP1LC3B-208ENST00000570189 PVRIGQ6DKI7 326 aa12.76□□□□□ -0.37
MAP1LC3B-208ENST00000570189 TP53RKQ96S44 253 aa12.76□□□□□ -0.37
MAP1LC3B-208ENST00000570189 IGHV3-35A0A0C4DH35 117 aa12.75□□□□□ -0.37
MAP1LC3B-208ENST00000570189 CTDSPLO15194 276 aa12.75□□□□□ -0.37
MAP1LC3B-208ENST00000570189 SCAF4O95104 1147 aaKnown RBP12.75□□□□□ -0.37
MAP1LC3B-208ENST00000570189 IGKV1-5P01602 117 aa12.75□□□□□ -0.37
MAP1LC3B-208ENST00000570189 PGAM2P15259 253 aa12.75□□□□□ -0.37
MAP1LC3B-208ENST00000570189 UCP1P25874 307 aa12.75□□□□□ -0.37
MAP1LC3B-208ENST00000570189 MFAP4P55083 255 aa12.75□□□□□ -0.37
MAP1LC3B-208ENST00000570189 AARDQ4LEZ3 155 aa12.75□□□□□ -0.37
MAP1LC3B-208ENST00000570189 LAMTOR1Q6IAA8 161 aa12.75□□□□□ -0.37
MAP1LC3B-208ENST00000570189 CCDC71LQ8N9Z2 235 aa12.75□□□□□ -0.37
MAP1LC3B-208ENST00000570189 OR4D10Q8NGI6 311 aa12.75□□□□□ -0.37
MAP1LC3B-208ENST00000570189 IL17DQ8TAD2 202 aa12.75□□□□□ -0.37
MAP1LC3B-208ENST00000570189 RAB2BQ8WUD1 216 aa12.75□□□□□ -0.37
MAP1LC3B-208ENST00000570189 SMIM4Q8WVI0 70 aa12.75□□□□□ -0.37
MAP1LC3B-208ENST00000570189 A0A0B4J293 547 aa12.74□□□□□ -0.37
MAP1LC3B-208ENST00000570189 C3orf85A0A1B0GTC6 90 aa12.74□□□□□ -0.37
MAP1LC3B-208ENST00000570189 NUPL2O15504 423 aaKnown RBP12.74□□□□□ -0.37
MAP1LC3B-208ENST00000570189 RAB3DO95716 219 aa12.74□□□□□ -0.37
MAP1LC3B-208ENST00000570189 CTSDP07339 412 aaPredicted RBP12.74□□□□□ -0.37
MAP1LC3B-208ENST00000570189 ERHP84090 104 aaKnown RBP12.74□□□□□ -0.37
MAP1LC3B-208ENST00000570189 MEF2DQ14814 521 aa12.74□□□□□ -0.37
MAP1LC3B-208ENST00000570189 SURF2Q15527 256 aaPredicted RBP12.74□□□□□ -0.37
MAP1LC3B-208ENST00000570189 Q56UQ5 140 aa12.74□□□□□ -0.37
MAP1LC3B-208ENST00000570189 STEAP1BQ6NZ63 245 aa12.74□□□□□ -0.37
MAP1LC3B-208ENST00000570189 GGTLC1Q9BX51 225 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms