RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 APELAP0DMC3 54 aa7.07□□□□□ -1.28
CAPN3-219ENST00000569136 DEFA4P12838 97 aa7.07□□□□□ -1.28
CAPN3-219ENST00000569136 FAUP35544 74 aaKnown RBP7.07□□□□□ -1.28
CAPN3-219ENST00000569136 PIGPP57054 158 aa7.07□□□□□ -1.28
CAPN3-219ENST00000569136 KLF5Q13887 457 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-219ENST00000569136 SCGB2B2Q4G0G5 96 aa7.07□□□□□ -1.28
CAPN3-219ENST00000569136 RNASE12Q5GAN4 147 aaKnown RBP7.07□□□□□ -1.28
CAPN3-219ENST00000569136 H2BFWTQ7Z2G1 175 aa7.07□□□□□ -1.28
CAPN3-219ENST00000569136 OR1L6Q8NGR2 347 aa7.07□□□□□ -1.28
CAPN3-219ENST00000569136 OR5B3Q8NH48 314 aa7.07□□□□□ -1.28
CAPN3-219ENST00000569136 OR4A16Q8NH70 328 aa7.07□□□□□ -1.28
CAPN3-219ENST00000569136 IL17DQ8TAD2 202 aa7.07□□□□□ -1.28
CAPN3-219ENST00000569136 TMEM56Q96MV1 263 aa7.07□□□□□ -1.28
CAPN3-219ENST00000569136 QTRT1Q9BXR0 403 aaKnown RBP7.07□□□□□ -1.28
CAPN3-219ENST00000569136 AKIP1Q9NQ31 210 aa7.07□□□□□ -1.28
CAPN3-219ENST00000569136 C14orf166Q9Y224 244 aaKnown RBP7.07□□□□□ -1.28
CAPN3-219ENST00000569136 KCNIP3Q9Y2W7 256 aa7.07□□□□□ -1.28
CAPN3-219ENST00000569136 IGHV4OR15-8A0A075B7B6 117 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 A0A087WW49 117 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 PIGBOS1A0A0B4J2F0 54 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 C3orf85A0A1B0GTC6 90 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 TEX50A0A1B0GTY4 177 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 ANKRD20A5PA0PJZ0 165 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 HMX3A6NHT5 357 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 E7EUB6 86 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 CTRB1P17538 263 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 G6PCP35575 357 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 ETV6P41212 452 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 NHLH2Q02577 135 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 C15orf32Q32M92 178 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 PYDC2Q56P42 97 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 SPANXN2Q5MJ10 180 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 CTRB2Q6GPI1 263 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 GDPD1Q8N9F7 314 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 OR4D10Q8NGI6 311 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 DLX4Q92988 240 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-219ENST00000569136 SEC22AQ96IW7 307 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 CXorf58Q96LI9 332 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 OR4C12Q96R67 309 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 RBM38Q9H0Z9 239 aaKnown RBP7.06□□□□□ -1.28
CAPN3-219ENST00000569136 ALX4Q9H161 411 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-219ENST00000569136 NDUFA4L2Q9NRX3 87 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 CACFD1Q9UGQ2 172 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 GPR132Q9UNW8 380 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 OR51B2Q9Y5P1 312 aa7.06□□□□□ -1.28
CAPN3-219ENST00000569136 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.05□□□□□ -1.28
CAPN3-219ENST00000569136 TRBV7-1A0A0A6YYK4 115 aa7.05□□□□□ -1.28
CAPN3-219ENST00000569136 TRAV3A0A0B4J244 114 aa7.05□□□□□ -1.28
CAPN3-219ENST00000569136 TEX13DA0A0J9YY54 714 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-219ENST00000569136 H0Y980 276 aa7.05□□□□□ -1.28
CAPN3-219ENST00000569136 OR13C7P0DN81 318 aa7.05□□□□□ -1.28
CAPN3-219ENST00000569136 HOXD3P31249 432 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-219ENST00000569136 KRTAP10-11P60412 298 aa7.05□□□□□ -1.28
CAPN3-219ENST00000569136 HSPE1P61604 102 aaKnown RBP7.05□□□□□ -1.28
CAPN3-219ENST00000569136 DHODHQ02127 395 aa7.05□□□□□ -1.28
CAPN3-219ENST00000569136 ZNF45Q02386 682 aa7.05□□□□□ -1.28
CAPN3-219ENST00000569136 C10orf55Q5SWW7 151 aa7.05□□□□□ -1.28
CAPN3-219ENST00000569136 ACSM6Q6P461 480 aa7.05□□□□□ -1.28
CAPN3-219ENST00000569136 CCDC190Q86UF4 302 aa7.05□□□□□ -1.28
CAPN3-219ENST00000569136 Q8N402 240 aa7.05□□□□□ -1.28
CAPN3-219ENST00000569136 OR13C8Q8NGS7 320 aa7.05□□□□□ -1.28
CAPN3-219ENST00000569136 RRNAD1Q96FB5 475 aaKnown RBP7.05□□□□□ -1.28
CAPN3-219ENST00000569136 ATP6V0BQ99437 205 aa7.05□□□□□ -1.28
CAPN3-219ENST00000569136 TMEM14BQ9NUH8 114 aa7.05□□□□□ -1.28
CAPN3-219ENST00000569136 SLC2A8Q9NY64 477 aa7.05□□□□□ -1.28
CAPN3-219ENST00000569136 A0A1B0GW64 132 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 IGLC7A0M8Q6 106 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 RBMXL2O75526 392 aaKnown RBP7.04□□□□□ -1.28
CAPN3-219ENST00000569136 OR2J3O76001 311 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 CDS2O95674 445 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 PRH1P02810 166 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 AREGP15514 252 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 ERHP84090 104 aaKnown RBP7.04□□□□□ -1.28
CAPN3-219ENST00000569136 RPEL1Q2QD12 228 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 TRIM16LQ309B1 348 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 FAM106AQ4KMX7 169 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 DEFB121Q5J5C9 76 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 FAM219AQ8IW50 185 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 TOMM5Q8N4H5 51 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 OR51S1Q8NGJ8 323 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 OR4C16Q8NGL9 310 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 OR6Q1Q8NGQ2 317 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 MARCH1Q8TCQ1 289 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 MRAPQ8TCY5 172 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 VN1R17PQ8TDU5 208 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 LSM10Q969L4 123 aaKnown RBP7.04□□□□□ -1.28
CAPN3-219ENST00000569136 EEF1AKMT3Q96AZ1 226 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 RTBDNQ9BSG5 229 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-219ENST00000569136 MCUBQ9NWR8 336 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 SIGLEC8Q9NYZ4 499 aa7.04□□□□□ -1.28
CAPN3-219ENST00000569136 SORL1Q92673 2214 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 IGLV11-55A0A075B6I3 123 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 CGB1A6NKQ9 187 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 C15orf61A6NNL5 157 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 GGCTO75223 188 aaKnown RBP7.03□□□□□ -1.28
CAPN3-219ENST00000569136 SAP30O75446 220 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 PRB2P02812 416 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-219ENST00000569136 CLEC3BP05452 202 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 UCP1P25874 307 aa7.03□□□□□ -1.28
CAPN3-219ENST00000569136 EXOSC2Q13868 293 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms