RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 ZNF785A8K8V0 405 aa15.33■□□□□ 0.04
CLK3-225ENST00000569063 HSPE1P61604 102 aaKnown RBP15.33■□□□□ 0.04
CLK3-225ENST00000569063 PLET1Q6UQ28 207 aa15.33■□□□□ 0.04
CLK3-225ENST00000569063 CCDC71LQ8N9Z2 235 aa15.33■□□□□ 0.04
CLK3-225ENST00000569063 OR1P1Q8NH06 330 aa15.33■□□□□ 0.04
CLK3-225ENST00000569063 MARCH1Q8TCQ1 289 aa15.33■□□□□ 0.04
CLK3-225ENST00000569063 SCARB1Q8WTV0 552 aa15.33■□□□□ 0.04
CLK3-225ENST00000569063 ZNF436Q9C0F3 470 aaPredicted RBP15.33■□□□□ 0.04
CLK3-225ENST00000569063 C6orf62Q9GZU0 229 aaPredicted RBP15.33■□□□□ 0.04
CLK3-225ENST00000569063 COPZ2Q9P299 210 aa15.33■□□□□ 0.04
CLK3-225ENST00000569063 TGOLN2O43493 480 aa15.32■□□□□ 0.04
CLK3-225ENST00000569063 B3GALNT1O75752 331 aa15.32■□□□□ 0.04
CLK3-225ENST00000569063 IGKV1-5P01602 117 aa15.32■□□□□ 0.04
CLK3-225ENST00000569063 CTSDP07339 412 aaPredicted RBP15.32■□□□□ 0.04
CLK3-225ENST00000569063 P0C879 139 aa15.32■□□□□ 0.04
CLK3-225ENST00000569063 PRCDQ00LT1 54 aa15.32■□□□□ 0.04
CLK3-225ENST00000569063 UNQ9165/PRO28630Q6UXU0 137 aa15.32■□□□□ 0.04
CLK3-225ENST00000569063 OR2C3Q8N628 320 aa15.32■□□□□ 0.04
CLK3-225ENST00000569063 BSCL2Q96G97 398 aaPredicted RBP15.32■□□□□ 0.04
CLK3-225ENST00000569063 NXF2Q9GZY0 626 aaKnown RBP15.32■□□□□ 0.04
CLK3-225ENST00000569063 PALMDQ9NP74 551 aa15.32■□□□□ 0.04
CLK3-225ENST00000569063 DISC1C4P0D8 188 aa15.31■□□□□ 0.04
CLK3-225ENST00000569063 K7EIM0 57 aa15.31■□□□□ 0.04
CLK3-225ENST00000569063 GSTZ1O43708 216 aaPredicted RBP15.31■□□□□ 0.04
CLK3-225ENST00000569063 ATG12O94817 140 aa15.31■□□□□ 0.04
CLK3-225ENST00000569063 SURF2Q15527 256 aaPredicted RBP15.31■□□□□ 0.04
CLK3-225ENST00000569063 FAAP20Q6NZ36 180 aa15.31■□□□□ 0.04
CLK3-225ENST00000569063 SPSB3Q6PJ21 355 aa15.31■□□□□ 0.04
CLK3-225ENST00000569063 ZNF114Q8NC26 417 aa15.31■□□□□ 0.04
CLK3-225ENST00000569063 CACNG8Q8WXS5 425 aa15.31■□□□□ 0.04
CLK3-225ENST00000569063 RCHY1Q96PM5 261 aa15.31■□□□□ 0.04
CLK3-225ENST00000569063 SOSTQ9BQB4 213 aa15.31■□□□□ 0.04
CLK3-225ENST00000569063 ZMAT4Q9H898 229 aa15.31■□□□□ 0.04
CLK3-225ENST00000569063 C21orf62Q9NYP8 219 aa15.31■□□□□ 0.04
CLK3-225ENST00000569063 RSL24D1Q9UHA3 163 aaKnown RBP15.31■□□□□ 0.04
CLK3-225ENST00000569063 CEPT1Q9Y6K0 416 aa15.31■□□□□ 0.04
CLK3-225ENST00000569063 OR2T8A6NH00 312 aa15.3■□□□□ 0.04
CLK3-225ENST00000569063 F8W735 103 aaPredicted RBP15.3■□□□□ 0.04
CLK3-225ENST00000569063 AKAIN1P0CW23 69 aa15.3■□□□□ 0.04
CLK3-225ENST00000569063 C8orf88P0DMB2 117 aa15.3■□□□□ 0.04
CLK3-225ENST00000569063 UCP1P25874 307 aa15.3■□□□□ 0.04
CLK3-225ENST00000569063 TNFSF8P32971 234 aa15.3■□□□□ 0.04
CLK3-225ENST00000569063 ELLP55199 621 aaPredicted RBP15.3■□□□□ 0.04
CLK3-225ENST00000569063 IZUMO4Q1ZYL8 232 aa15.3■□□□□ 0.04
CLK3-225ENST00000569063 SP6Q3SY56 376 aa15.3■□□□□ 0.04
CLK3-225ENST00000569063 TM4SF20Q53R12 229 aa15.3■□□□□ 0.04
CLK3-225ENST00000569063 UXS1Q8NBZ7 420 aa15.3■□□□□ 0.04
CLK3-225ENST00000569063 OR4C16Q8NGL9 310 aa15.3■□□□□ 0.04
CLK3-225ENST00000569063 MARC2Q969Z3 335 aa15.3■□□□□ 0.04
CLK3-225ENST00000569063 TM2D3Q9BRN9 247 aa15.3■□□□□ 0.04
CLK3-225ENST00000569063 RTBDNQ9BSG5 229 aaPredicted RBP15.3■□□□□ 0.04
CLK3-225ENST00000569063 UFC1Q9Y3C8 167 aa15.3■□□□□ 0.04
CLK3-225ENST00000569063 A0A0B4J293 547 aa15.29■□□□□ 0.04
CLK3-225ENST00000569063 ANKRD20A5PA0PJZ0 165 aa15.29■□□□□ 0.04
CLK3-225ENST00000569063 CD81P60033 236 aa15.29■□□□□ 0.04
CLK3-225ENST00000569063 TRIM16LQ309B1 348 aa15.29■□□□□ 0.04
CLK3-225ENST00000569063 ZNF57Q68EA5 555 aaPredicted RBP15.29■□□□□ 0.04
CLK3-225ENST00000569063 MCFD2Q8NI22 146 aa15.29■□□□□ 0.04
CLK3-225ENST00000569063 NEURL2Q9BR09 285 aa15.29■□□□□ 0.04
CLK3-225ENST00000569063 SLC2A8Q9NY64 477 aa15.29■□□□□ 0.04
CLK3-225ENST00000569063 MLXQ9UH92 298 aa15.29■□□□□ 0.04
CLK3-225ENST00000569063 C14orf166Q9Y224 244 aaKnown RBP15.29■□□□□ 0.04
CLK3-225ENST00000569063 IGHV3-21A0A0B4J1V1 117 aa15.28■□□□□ 0.04
CLK3-225ENST00000569063 IGHV3-35A0A0C4DH35 117 aa15.28■□□□□ 0.04
CLK3-225ENST00000569063 FABP12A6NFH5 140 aa15.28■□□□□ 0.04
CLK3-225ENST00000569063 AKR1C2P52895 323 aa15.28■□□□□ 0.04
CLK3-225ENST00000569063 ERHP84090 104 aaKnown RBP15.28■□□□□ 0.04
CLK3-225ENST00000569063 WDR89Q96FK6 387 aaPredicted RBP15.28■□□□□ 0.04
CLK3-225ENST00000569063 PRRT1Q99946 306 aa15.28■□□□□ 0.04
CLK3-225ENST00000569063 TUBA4BQ9H853 241 aa15.28■□□□□ 0.04
CLK3-225ENST00000569063 PLEKHA3Q9HB20 300 aa15.28■□□□□ 0.04
CLK3-225ENST00000569063 MRPL27Q9P0M9 148 aaKnown RBP15.28■□□□□ 0.04
CLK3-225ENST00000569063 INS-IGF2F8WCM5 200 aa15.27■□□□□ 0.04
CLK3-225ENST00000569063 I3L2K1 104 aa15.27■□□□□ 0.04
CLK3-225ENST00000569063 NDUFA4O00483 81 aa15.27■□□□□ 0.04
CLK3-225ENST00000569063 CDS2O95674 445 aa15.27■□□□□ 0.04
CLK3-225ENST00000569063 GUCA2BQ16661 112 aa15.27■□□□□ 0.04
CLK3-225ENST00000569063 TMEM61Q8N0U2 210 aa15.27■□□□□ 0.04
CLK3-225ENST00000569063 OR51S1Q8NGJ8 323 aa15.27■□□□□ 0.04
CLK3-225ENST00000569063 TMEM190Q8WZ59 177 aa15.27■□□□□ 0.04
CLK3-225ENST00000569063 CHRDL1Q9BU40 450 aa15.27■□□□□ 0.04
CLK3-225ENST00000569063 TMEM222Q9H0R3 208 aa15.27■□□□□ 0.04
CLK3-225ENST00000569063 C5orf66Q9H5L9 145 aa15.27■□□□□ 0.04
CLK3-225ENST00000569063 GAR1Q9NY12 217 aaKnown RBP15.27■□□□□ 0.04
CLK3-225ENST00000569063 GPR132Q9UNW8 380 aa15.27■□□□□ 0.04
CLK3-225ENST00000569063 HUWE1Q7Z6Z7 4374 aaKnown RBP15.27■□□□□ 0.03
CLK3-225ENST00000569063 ST8SIA3O43173 380 aa15.26■□□□□ 0.03
CLK3-225ENST00000569063 CD7P09564 240 aa15.26■□□□□ 0.03
CLK3-225ENST00000569063 OR5AC1P0C628 307 aa15.26■□□□□ 0.03
CLK3-225ENST00000569063 FCGR2BP31994 310 aaPredicted RBP15.26■□□□□ 0.03
CLK3-225ENST00000569063 ADMP35318 185 aa15.26■□□□□ 0.03
CLK3-225ENST00000569063 Q56UQ5 140 aa15.26■□□□□ 0.03
CLK3-225ENST00000569063 UBAC2Q8NBM4 344 aa15.26■□□□□ 0.03
CLK3-225ENST00000569063 GLYATL2Q8WU03 294 aa15.26■□□□□ 0.03
CLK3-225ENST00000569063 RRNAD1Q96FB5 475 aaKnown RBP15.26■□□□□ 0.03
CLK3-225ENST00000569063 MISP3Q96FF7 219 aa15.26■□□□□ 0.03
CLK3-225ENST00000569063 TXN2Q99757 166 aa15.26■□□□□ 0.03
CLK3-225ENST00000569063 NAA60Q9H7X0 242 aa15.26■□□□□ 0.03
CLK3-225ENST00000569063 TEX13DA0A0J9YY54 714 aaPredicted RBP15.25■□□□□ 0.03
CLK3-225ENST00000569063 IFNA17P01571 189 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms