RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 OR51H1Q8NH63 302 aa11.54□□□□□ -0.56
HERPUD1-215ENST00000568676 DGCR14Q96DF8 476 aaKnown RBP11.54□□□□□ -0.56
HERPUD1-215ENST00000568676 TXN2Q99757 166 aa11.54□□□□□ -0.56
HERPUD1-215ENST00000568676 DAPK2Q9UIK4 370 aa11.54□□□□□ -0.56
HERPUD1-215ENST00000568676 SNAPC5O75971 98 aa11.53□□□□□ -0.56
HERPUD1-215ENST00000568676 F2RP25116 425 aa11.53□□□□□ -0.56
HERPUD1-215ENST00000568676 CBX5P45973 191 aa11.53□□□□□ -0.56
HERPUD1-215ENST00000568676 MFAP2P55001 183 aa11.53□□□□□ -0.56
HERPUD1-215ENST00000568676 FXYD4P59646 89 aa11.53□□□□□ -0.56
HERPUD1-215ENST00000568676 PRR20EP86478 221 aa11.53□□□□□ -0.56
HERPUD1-215ENST00000568676 PRR20CP86479 221 aa11.53□□□□□ -0.56
HERPUD1-215ENST00000568676 PRR20DP86480 221 aa11.53□□□□□ -0.56
HERPUD1-215ENST00000568676 PRR20BP86481 221 aa11.53□□□□□ -0.56
HERPUD1-215ENST00000568676 PRR20AP86496 221 aa11.53□□□□□ -0.56
HERPUD1-215ENST00000568676 TMEM41BQ5BJD5 291 aa11.53□□□□□ -0.56
HERPUD1-215ENST00000568676 SFXN4Q6P4A7 337 aa11.53□□□□□ -0.56
HERPUD1-215ENST00000568676 OR5AP2Q8NGF4 316 aa11.53□□□□□ -0.56
HERPUD1-215ENST00000568676 OR1P1Q8NH06 330 aa11.53□□□□□ -0.56
HERPUD1-215ENST00000568676 LGALS14Q8TCE9 139 aa11.53□□□□□ -0.56
HERPUD1-215ENST00000568676 PRNDQ9UKY0 176 aa11.53□□□□□ -0.56
HERPUD1-215ENST00000568676 TRAV14DV4A0A0A6YYC5 116 aa11.52□□□□□ -0.57
HERPUD1-215ENST00000568676 TRAV2A0A0B4J234 112 aa11.52□□□□□ -0.57
HERPUD1-215ENST00000568676 C15orf61A6NNL5 157 aa11.52□□□□□ -0.57
HERPUD1-215ENST00000568676 ZNF207O43670 478 aaKnown RBP11.52□□□□□ -0.57
HERPUD1-215ENST00000568676 CA1P00915 261 aaPredicted RBP11.52□□□□□ -0.57
HERPUD1-215ENST00000568676 EIF4EP06730 217 aaKnown RBP11.52□□□□□ -0.57
HERPUD1-215ENST00000568676 MFAP4P55083 255 aa11.52□□□□□ -0.57
HERPUD1-215ENST00000568676 FAM90A2PQ658T7 463 aa11.52□□□□□ -0.57
HERPUD1-215ENST00000568676 GVQW1Q8N7I0 195 aa11.52□□□□□ -0.57
HERPUD1-215ENST00000568676 TSC22D3Q99576 134 aa11.52□□□□□ -0.57
HERPUD1-215ENST00000568676 GINS3Q9BRX5 216 aa11.52□□□□□ -0.57
HERPUD1-215ENST00000568676 HINT2Q9BX68 163 aa11.52□□□□□ -0.57
HERPUD1-215ENST00000568676 TXNL4BQ9NX01 149 aaKnown RBP11.52□□□□□ -0.57
HERPUD1-215ENST00000568676 APLNQ9ULZ1 77 aa11.52□□□□□ -0.57
HERPUD1-215ENST00000568676 OR51B2Q9Y5P1 312 aa11.52□□□□□ -0.57
HERPUD1-215ENST00000568676 PCLOQ9Y6V0 5065 aa11.51□□□□□ -0.57
HERPUD1-215ENST00000568676 TRAV18A0A075B6X5 111 aa11.51□□□□□ -0.57
HERPUD1-215ENST00000568676 IGHV3OR16-8A0A075B7F1 116 aa11.51□□□□□ -0.57
HERPUD1-215ENST00000568676 IGHV3-21A0A0B4J1V1 117 aa11.51□□□□□ -0.57
HERPUD1-215ENST00000568676 SMIM30A4D0T7 59 aa11.51□□□□□ -0.57
HERPUD1-215ENST00000568676 YIF1AO95070 293 aa11.51□□□□□ -0.57
HERPUD1-215ENST00000568676 GNRHRP30968 328 aa11.51□□□□□ -0.57
HERPUD1-215ENST00000568676 TFPI2P48307 235 aa11.51□□□□□ -0.57
HERPUD1-215ENST00000568676 HERV-K104P61576 105 aa11.51□□□□□ -0.57
HERPUD1-215ENST00000568676 TMEM17Q86X19 198 aa11.51□□□□□ -0.57
HERPUD1-215ENST00000568676 CENPSQ8N2Z9 138 aa11.51□□□□□ -0.57
HERPUD1-215ENST00000568676 YTHDF1Q9BYJ9 559 aaKnown RBP11.51□□□□□ -0.57
HERPUD1-215ENST00000568676 IGLL5B9A064 214 aa11.5□□□□□ -0.57
HERPUD1-215ENST00000568676 GABARAPL2P60520 117 aa11.5□□□□□ -0.57
HERPUD1-215ENST00000568676 ZNF124Q15973 351 aa11.5□□□□□ -0.57
HERPUD1-215ENST00000568676 CMTM1Q8IZ96 169 aa11.5□□□□□ -0.57
HERPUD1-215ENST00000568676 TSPAN14Q8NG11 270 aa11.5□□□□□ -0.57
HERPUD1-215ENST00000568676 NXF2Q9GZY0 626 aaKnown RBP11.5□□□□□ -0.57
HERPUD1-215ENST00000568676 DIABLOQ9NR28 239 aa11.5□□□□□ -0.57
HERPUD1-215ENST00000568676 SSR3Q9UNL2 185 aa11.5□□□□□ -0.57
HERPUD1-215ENST00000568676 TMEM127O75204 238 aa11.49□□□□□ -0.57
HERPUD1-215ENST00000568676 KRASP01116 189 aa11.49□□□□□ -0.57
HERPUD1-215ENST00000568676 PTHLHP12272 177 aa11.49□□□□□ -0.57
HERPUD1-215ENST00000568676 UBE2UQ5VVX9 321 aa11.49□□□□□ -0.57
HERPUD1-215ENST00000568676 DHRS11Q6UWP2 260 aa11.49□□□□□ -0.57
HERPUD1-215ENST00000568676 TCF24Q7RTU0 167 aa11.49□□□□□ -0.57
HERPUD1-215ENST00000568676 ZNF114Q8NC26 417 aa11.49□□□□□ -0.57
HERPUD1-215ENST00000568676 DUSP18Q8NEJ0 188 aa11.49□□□□□ -0.57
HERPUD1-215ENST00000568676 AUNIPQ9H7T9 357 aa11.49□□□□□ -0.57
HERPUD1-215ENST00000568676 FAM212BQ9NTI7 297 aaPredicted RBP11.49□□□□□ -0.57
HERPUD1-215ENST00000568676 TMEM14BQ9NUH8 114 aa11.49□□□□□ -0.57
HERPUD1-215ENST00000568676 IGKV3-7A0A075B6H7 116 aa11.48□□□□□ -0.57
HERPUD1-215ENST00000568676 I3L2K1 104 aa11.48□□□□□ -0.57
HERPUD1-215ENST00000568676 DNASE2O00115 360 aaPredicted RBP11.48□□□□□ -0.57
HERPUD1-215ENST00000568676 PGLYRP1O75594 196 aaPredicted RBP11.48□□□□□ -0.57
HERPUD1-215ENST00000568676 RLN1P04808 185 aa11.48□□□□□ -0.57
HERPUD1-215ENST00000568676 MIFP14174 115 aa11.48□□□□□ -0.57
HERPUD1-215ENST00000568676 LPAR6P43657 344 aa11.48□□□□□ -0.57
HERPUD1-215ENST00000568676 STHQ8IWL8 128 aa11.48□□□□□ -0.57
HERPUD1-215ENST00000568676 Q8NAQ8 132 aa11.48□□□□□ -0.57
HERPUD1-215ENST00000568676 FCAMRQ8WWV6 532 aa11.48□□□□□ -0.57
HERPUD1-215ENST00000568676 FCGR1BQ92637 280 aa11.48□□□□□ -0.57
HERPUD1-215ENST00000568676 SLC25A46Q96AG3 418 aa11.48□□□□□ -0.57
HERPUD1-215ENST00000568676 ZNF414Q96IQ9 312 aa11.48□□□□□ -0.57
HERPUD1-215ENST00000568676 TMEM231Q9H6L2 316 aa11.48□□□□□ -0.57
HERPUD1-215ENST00000568676 VSIRQ9H7M9 311 aa11.48□□□□□ -0.57
HERPUD1-215ENST00000568676 VPS13DQ5THJ4 4388 aa11.48□□□□□ -0.57
HERPUD1-215ENST00000568676 TRAV10A0A0B4J240 114 aa11.47□□□□□ -0.57
HERPUD1-215ENST00000568676 ST8SIA3O43173 380 aa11.47□□□□□ -0.57
HERPUD1-215ENST00000568676 GNG7O60262 68 aa11.47□□□□□ -0.57
HERPUD1-215ENST00000568676 MED14OSP0DP75 135 aa11.47□□□□□ -0.57
HERPUD1-215ENST00000568676 G6PCP35575 357 aa11.47□□□□□ -0.57
HERPUD1-215ENST00000568676 MORN3Q6PF18 240 aaPredicted RBP11.47□□□□□ -0.57
HERPUD1-215ENST00000568676 GBGT1Q8N5D6 347 aa11.47□□□□□ -0.57
HERPUD1-215ENST00000568676 MOB3AQ96BX8 217 aa11.47□□□□□ -0.57
HERPUD1-215ENST00000568676 SLC25A38Q96DW6 304 aa11.47□□□□□ -0.57
HERPUD1-215ENST00000568676 MISP3Q96FF7 219 aa11.47□□□□□ -0.57
HERPUD1-215ENST00000568676 MS4A6AQ9H2W1 248 aa11.47□□□□□ -0.57
HERPUD1-215ENST00000568676 EHFQ9NZC4 300 aa11.47□□□□□ -0.57
HERPUD1-215ENST00000568676 NSG2Q9Y328 171 aa11.47□□□□□ -0.57
HERPUD1-215ENST00000568676 IGHV3-49A0A0A0MS15 119 aa11.46□□□□□ -0.57
HERPUD1-215ENST00000568676 DEFB4AO15263 64 aa11.46□□□□□ -0.57
HERPUD1-215ENST00000568676 MT-CO2P00403 227 aa11.46□□□□□ -0.57
HERPUD1-215ENST00000568676 SPP1P10451 314 aa11.46□□□□□ -0.57
HERPUD1-215ENST00000568676 PSMB9P28065 219 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms