RNA–Protein interactions for RNA: ENST00000565910.5

ETFA-220, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-220ENST00000565910 TRAV9-1A0A075B6T8 112 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 TRAV38-1A0A0B4J264 116 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 TRAV41A0A0B4J266 112 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 A0A0G2JQZ4 141 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 TMEM235A6NFC5 223 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 C1orf196B1AJZ1 125 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 BUB1B-PAK6H3BSN5 160 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 PGLYRP1O75594 196 aaPredicted RBP1.58□□□□□ -2.16
ETFA-220ENST00000565910 ZNF682O95780 498 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 IGHV3-7P01780 117 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 MSNP26038 577 aaKnown RBP1.58□□□□□ -2.16
ETFA-220ENST00000565910 SRIP30626 198 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 ALDH3A1P30838 453 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 MAGEA12P43365 314 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 TPI1P60174 286 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 VBP1P61758 197 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 HIST1H3AP68431 136 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 H3F3AP84243 136 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 RELAQ04206 551 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 FAM27BQ5VT28 67 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 LRRC28Q86X40 367 aaPredicted RBP1.58□□□□□ -2.16
ETFA-220ENST00000565910 SMIM20Q8N5G0 67 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 NEK7Q8TDX7 302 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 RASSF5Q8WWW0 418 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 NIPSNAP1Q9BPW8 284 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 ZNF471Q9BX82 626 aaPredicted RBP1.58□□□□□ -2.16
ETFA-220ENST00000565910 NMNAT1Q9HAN9 279 aaPredicted RBP1.58□□□□□ -2.16
ETFA-220ENST00000565910 HHLA3Q9XRX5 114 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 KIF13BQ9NQT8 1826 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 CPAMD8Q8IZJ3 1885 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 ZNF106Q9H2Y7 1883 aaKnown RBP1.58□□□□□ -2.16
ETFA-220ENST00000565910 KIF24Q5T7B8 1368 aa1.58□□□□□ -2.16
ETFA-220ENST00000565910 NCOA1Q15788 1441 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 MIA2Q96PC5 1412 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 ADGRB3O60242 1522 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 TMSB15BA0A087X1C1 80 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 MUC21A0A0G2JKD1 596 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 A0A0J9YW62 118 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 MUC21A0A140T8X8 626 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 CIAO1O76071 339 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 SERPINE1P05121 402 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 FABP1P07148 127 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 RPS4Y1P22090 263 aaKnown RBP1.57□□□□□ -2.16
ETFA-220ENST00000565910 AQP4P55087 323 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 TAS2R41P59536 307 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 RHOBP62745 196 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 CCL20P78556 96 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 RPL19P84098 196 aaKnown RBP1.57□□□□□ -2.16
ETFA-220ENST00000565910 IAH1Q2TAA2 248 aaPredicted RBP1.57□□□□□ -2.16
ETFA-220ENST00000565910 C9orf64Q5T6V5 341 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 LYZL1Q6UWQ5 148 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 LYG2Q86SG7 212 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 OOSP2Q86WS3 158 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 MCFD2Q8NI22 146 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 CCDC90BQ9GZT6 254 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 SAMHD1Q9Y3Z3 626 aaKnown RBP1.57□□□□□ -2.16
ETFA-220ENST00000565910 FAM215AQ9Y5M1 114 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 PLXND1Q9Y4D7 1925 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 HEATR5AQ86XA9 2040 aa1.57□□□□□ -2.16
ETFA-220ENST00000565910 TRAV7A0A075B6U4 112 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 C2orf74A8MZ97 194 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 J3QQQ9 107 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 OR2J2O76002 312 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 SHBGP04278 402 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 SULT1A3P0DMM9 295 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 SULT1A4P0DMN0 295 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 SMIM10L2AP0DMW4 78 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 SMIM10L2BP0DMW5 78 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 ERP29P30040 261 aaKnown RBP1.56□□□□□ -2.16
ETFA-220ENST00000565910 ATP5G3P48201 142 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 ZNF80P51504 273 aaPredicted RBP1.56□□□□□ -2.16
ETFA-220ENST00000565910 CDC42P60953 191 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 RPL26P61254 145 aaKnown RBP1.56□□□□□ -2.16
ETFA-220ENST00000565910 POLR2GP62487 172 aaKnown RBP eCLIP1.56□□□□□ -2.16
ETFA-220ENST00000565910 RPL18Q07020 188 aaKnown RBP1.56□□□□□ -2.16
ETFA-220ENST00000565910 SLC38A11Q08AI6 406 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 KRR1Q13601 381 aaKnown RBP1.56□□□□□ -2.16
ETFA-220ENST00000565910 TPRXLQ17RH7 258 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 ZNF791Q3KP31 576 aaPredicted RBP1.56□□□□□ -2.16
ETFA-220ENST00000565910 ARHGAP11BQ3KRB8 267 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 GOLT1AQ6ZVE7 132 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 STX12Q86Y82 276 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 C12orf45Q8N5I9 185 aaPredicted RBP1.56□□□□□ -2.16
ETFA-220ENST00000565910 OR5J2Q8NH18 312 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 TOMM6Q96B49 74 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 RPL26L1Q9UNX3 145 aaKnown RBP1.56□□□□□ -2.16
ETFA-220ENST00000565910 TIMM9Q9Y5J7 89 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 COL11A1P12107 1806 aaPredicted RBP1.56□□□□□ -2.16
ETFA-220ENST00000565910 ECM29Q5VYK3 1845 aa1.56□□□□□ -2.16
ETFA-220ENST00000565910 DENND4BO75064 1496 aaPredicted RBP1.56□□□□□ -2.16
ETFA-220ENST00000565910 COL4A2P08572 1712 aa1.55□□□□□ -2.16
ETFA-220ENST00000565910 TRAPPC13A5PLN9 417 aa1.55□□□□□ -2.16
ETFA-220ENST00000565910 FABP5P3A8MUU1 101 aa1.55□□□□□ -2.16
ETFA-220ENST00000565910 E5RI56 91 aa1.55□□□□□ -2.16
ETFA-220ENST00000565910 H7C2G1 150 aa1.55□□□□□ -2.16
ETFA-220ENST00000565910 CREBL2O60519 120 aaPredicted RBP1.55□□□□□ -2.16
ETFA-220ENST00000565910 ATG12O94817 140 aa1.55□□□□□ -2.16
ETFA-220ENST00000565910 IGKV1-16P04430 117 aa1.55□□□□□ -2.16
ETFA-220ENST00000565910 C8GP07360 202 aa1.55□□□□□ -2.16
ETFA-220ENST00000565910 RBP1P09455 135 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms