RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 STARD9Q9P2P6 4700 aa11.72□□□□□ -0.53
CDH3-204ENST00000565453 IGHV3-21A0A0B4J1V1 117 aa11.71□□□□□ -0.53
CDH3-204ENST00000565453 OR2T8A6NH00 312 aa11.71□□□□□ -0.53
CDH3-204ENST00000565453 M0QYG6 137 aa11.71□□□□□ -0.53
CDH3-204ENST00000565453 ADMP35318 185 aa11.71□□□□□ -0.53
CDH3-204ENST00000565453 SPSB3Q6PJ21 355 aa11.71□□□□□ -0.53
CDH3-204ENST00000565453 LHFPL1Q86WI0 220 aa11.71□□□□□ -0.53
CDH3-204ENST00000565453 OR52B4Q8NGK2 314 aa11.71□□□□□ -0.53
CDH3-204ENST00000565453 TMEM56Q96MV1 263 aa11.71□□□□□ -0.53
CDH3-204ENST00000565453 GAR1Q9NY12 217 aaKnown RBP11.71□□□□□ -0.53
CDH3-204ENST00000565453 C21orf62Q9NYP8 219 aa11.71□□□□□ -0.53
CDH3-204ENST00000565453 TENM2Q9NT68 2774 aa11.71□□□□□ -0.54
CDH3-204ENST00000565453 LCE6AA0A183 80 aa11.7□□□□□ -0.54
CDH3-204ENST00000565453 FAM25AB3EWG3 89 aa11.7□□□□□ -0.54
CDH3-204ENST00000565453 FAM25CB3EWG5 89 aa11.7□□□□□ -0.54
CDH3-204ENST00000565453 FAM25GB3EWG6 89 aa11.7□□□□□ -0.54
CDH3-204ENST00000565453 ZNF182P17025 639 aaPredicted RBP11.7□□□□□ -0.54
CDH3-204ENST00000565453 S100GP29377 79 aa11.7□□□□□ -0.54
CDH3-204ENST00000565453 RND3P61587 244 aa11.7□□□□□ -0.54
CDH3-204ENST00000565453 MZT2AQ6P582 158 aa11.7□□□□□ -0.54
CDH3-204ENST00000565453 OR2C3Q8N628 320 aa11.7□□□□□ -0.54
CDH3-204ENST00000565453 OR1L6Q8NGR2 347 aa11.7□□□□□ -0.54
CDH3-204ENST00000565453 OR1P1Q8NH06 330 aa11.7□□□□□ -0.54
CDH3-204ENST00000565453 OR52I2Q8NH67 350 aa11.7□□□□□ -0.54
CDH3-204ENST00000565453 C5orf66Q9H5L9 145 aa11.7□□□□□ -0.54
CDH3-204ENST00000565453 KLK11Q9UBX7 282 aa11.7□□□□□ -0.54
CDH3-204ENST00000565453 RYR2Q92736 4967 aa11.69□□□□□ -0.54
CDH3-204ENST00000565453 NDUFA4O00483 81 aa11.69□□□□□ -0.54
CDH3-204ENST00000565453 ANKRD55Q3KP44 614 aa11.69□□□□□ -0.54
CDH3-204ENST00000565453 RNASE12Q5GAN4 147 aaKnown RBP11.69□□□□□ -0.54
CDH3-204ENST00000565453 ZNF114Q8NC26 417 aa11.69□□□□□ -0.54
CDH3-204ENST00000565453 AP3S1Q92572 193 aa11.69□□□□□ -0.54
CDH3-204ENST00000565453 MRGPRFQ96AM1 343 aa11.69□□□□□ -0.54
CDH3-204ENST00000565453 ABHD1Q96SE0 405 aa11.69□□□□□ -0.54
CDH3-204ENST00000565453 DAZ1Q9NQZ3 744 aaKnown RBP11.69□□□□□ -0.54
CDH3-204ENST00000565453 EXTL2Q9UBQ6 330 aa11.69□□□□□ -0.54
CDH3-204ENST00000565453 I3L2K1 104 aa11.68□□□□□ -0.54
CDH3-204ENST00000565453 CD3DP04234 171 aa11.68□□□□□ -0.54
CDH3-204ENST00000565453 CTSGP08311 255 aa11.68□□□□□ -0.54
CDH3-204ENST00000565453 P0C879 139 aa11.68□□□□□ -0.54
CDH3-204ENST00000565453 PRCDQ00LT1 54 aa11.68□□□□□ -0.54
CDH3-204ENST00000565453 GPR107Q5VW38 600 aa11.68□□□□□ -0.54
CDH3-204ENST00000565453 RBPMS2Q6ZRY4 209 aaKnown RBP11.68□□□□□ -0.54
CDH3-204ENST00000565453 H2BFWTQ7Z2G1 175 aa11.68□□□□□ -0.54
CDH3-204ENST00000565453 OR4A16Q8NH70 328 aa11.68□□□□□ -0.54
CDH3-204ENST00000565453 ZNF486Q96H40 463 aaPredicted RBP11.68□□□□□ -0.54
CDH3-204ENST00000565453 LYSTQ99698 3801 aa11.68□□□□□ -0.54
CDH3-204ENST00000565453 MTFP1Q9UDX5 166 aa11.68□□□□□ -0.54
CDH3-204ENST00000565453 SACSQ9NZJ4 4579 aa11.68□□□□□ -0.54
CDH3-204ENST00000565453 K7EMT4 169 aa11.67□□□□□ -0.54
CDH3-204ENST00000565453 TSPAN4O14817 238 aa11.67□□□□□ -0.54
CDH3-204ENST00000565453 IGKV1-5P01602 117 aa11.67□□□□□ -0.54
CDH3-204ENST00000565453 PI3P19957 117 aa11.67□□□□□ -0.54
CDH3-204ENST00000565453 FCGR2BP31994 310 aaPredicted RBP11.67□□□□□ -0.54
CDH3-204ENST00000565453 HSPE1P61604 102 aaKnown RBP11.67□□□□□ -0.54
CDH3-204ENST00000565453 IZUMO4Q1ZYL8 232 aa11.67□□□□□ -0.54
CDH3-204ENST00000565453 Q56UQ5 140 aa11.67□□□□□ -0.54
CDH3-204ENST00000565453 RNASE10Q5GAN6 216 aaKnown RBP11.67□□□□□ -0.54
CDH3-204ENST00000565453 ARRDC1Q8N5I2 433 aa11.67□□□□□ -0.54
CDH3-204ENST00000565453 UBAC2Q8NBM4 344 aa11.67□□□□□ -0.54
CDH3-204ENST00000565453 SPAG8Q99932 426 aaPredicted RBP11.67□□□□□ -0.54
CDH3-204ENST00000565453 GGTLC1Q9BX51 225 aa11.67□□□□□ -0.54
CDH3-204ENST00000565453 MIXL1Q9H2W2 232 aa11.67□□□□□ -0.54
CDH3-204ENST00000565453 IGHV3OR16-8A0A075B7F1 116 aa11.66□□□□□ -0.54
CDH3-204ENST00000565453 LOC102724200A0A096LPH7 203 aaPredicted RBP11.66□□□□□ -0.54
CDH3-204ENST00000565453 CD74P04233 296 aa11.66□□□□□ -0.54
CDH3-204ENST00000565453 PGAM2P15259 253 aa11.66□□□□□ -0.54
CDH3-204ENST00000565453 TBPP20226 339 aa11.66□□□□□ -0.54
CDH3-204ENST00000565453 ALDH3B2P48448 385 aa11.66□□□□□ -0.54
CDH3-204ENST00000565453 OR4D10Q8NGI6 311 aa11.66□□□□□ -0.54
CDH3-204ENST00000565453 TP53RKQ96S44 253 aa11.66□□□□□ -0.54
CDH3-204ENST00000565453 C15orf62A8K5M9 175 aa11.65□□□□□ -0.54
CDH3-204ENST00000565453 ZNF207O43670 478 aaKnown RBP11.65□□□□□ -0.54
CDH3-204ENST00000565453 PIGPP57054 158 aa11.65□□□□□ -0.54
CDH3-204ENST00000565453 TMEM229BQ8NBD8 167 aa11.65□□□□□ -0.54
CDH3-204ENST00000565453 MISP3Q96FF7 219 aa11.65□□□□□ -0.54
CDH3-204ENST00000565453 TXN2Q99757 166 aa11.65□□□□□ -0.54
CDH3-204ENST00000565453 OVOL2Q9BRP0 275 aa11.65□□□□□ -0.54
CDH3-204ENST00000565453 C20orf24Q9BUV8 137 aa11.65□□□□□ -0.54
CDH3-204ENST00000565453 MRPS26Q9BYN8 205 aaKnown RBP11.65□□□□□ -0.54
CDH3-204ENST00000565453 A0A0B4J293 547 aa11.64□□□□□ -0.55
CDH3-204ENST00000565453 INS-IGF2F8WCM5 200 aa11.64□□□□□ -0.55
CDH3-204ENST00000565453 MT-CO2P00403 227 aa11.64□□□□□ -0.55
CDH3-204ENST00000565453 MFAP4P55083 255 aa11.64□□□□□ -0.55
CDH3-204ENST00000565453 ODF3L2Q3SX64 289 aa11.64□□□□□ -0.55
CDH3-204ENST00000565453 PVRIGQ6DKI7 326 aa11.64□□□□□ -0.55
CDH3-204ENST00000565453 LAMTOR1Q6IAA8 161 aa11.64□□□□□ -0.55
CDH3-204ENST00000565453 C15orf40Q8WUR7 153 aa11.64□□□□□ -0.55
CDH3-204ENST00000565453 OR10C1Q96KK4 312 aa11.64□□□□□ -0.55
CDH3-204ENST00000565453 UBQLN2Q9UHD9 624 aa11.64□□□□□ -0.55
CDH3-204ENST00000565453 SMPXQ9UHP9 88 aa11.64□□□□□ -0.55
CDH3-204ENST00000565453 DNAH1Q9P2D7 4330 aa11.63□□□□□ -0.55
CDH3-204ENST00000565453 C3orf85A0A1B0GTC6 90 aa11.63□□□□□ -0.55
CDH3-204ENST00000565453 NUPL2O15504 423 aaKnown RBP11.63□□□□□ -0.55
CDH3-204ENST00000565453 IGHV3-48P01763 117 aa11.63□□□□□ -0.55
CDH3-204ENST00000565453 CTSDP07339 412 aaPredicted RBP11.63□□□□□ -0.55
CDH3-204ENST00000565453 PPP5CP53041 499 aa11.63□□□□□ -0.55
CDH3-204ENST00000565453 ERHP84090 104 aaKnown RBP11.63□□□□□ -0.55
CDH3-204ENST00000565453 RELQ04864 619 aaPredicted RBP11.63□□□□□ -0.55
CDH3-204ENST00000565453 SPCS2Q15005 226 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms