RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 MED9Q9NWA0 146 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 DOK5Q9P104 306 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 SOX21Q9Y651 276 aaPredicted RBP0.76□□□□□ -2.29
CHD9-211ENST00000564600 TMEM56-RWDD3S4R434 201 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 AHNAK2Q8IVF2 5795 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 BRWD1Q9NSI6 2320 aa0.76□□□□□ -2.29
CHD9-211ENST00000564600 USP24Q9UPU5 2620 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 TONSLQ96HA7 1378 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 A0A087WUJ7 227 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 A0A0J9YY10 115 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 A0A1B0GX78 115 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 SMIM9A6NGZ8 99 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 IBA57-AS1B1ANH7 110 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 TRAPPC2LH3BP13 241 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 J3QQQ9 107 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 IFNA10P01566 189 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 TFPTP0C1Z6 253 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 ARL14EPLP0DKL9 152 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 MSNP26038 577 aaKnown RBP0.75□□□□□ -2.29
CHD9-211ENST00000564600 S100A7P31151 101 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 HAAOP46952 286 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 RPL26P61254 145 aaKnown RBP0.75□□□□□ -2.29
CHD9-211ENST00000564600 Q1T7F1 81 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 SPANXN3Q5MJ09 141 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 UNQ6190/PRO20217Q6UXQ8 127 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 ZNF826PQ6ZT77 177 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 KTN1-AS1Q86SY8 53 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 OR4X2Q8NGF9 303 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 OR51T1Q8NGJ9 327 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 C2orf50Q96LR7 162 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 CCDC42Q96M95 316 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 DCSTAMPQ9H295 470 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 PARVBQ9HBI1 364 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 PAQR5Q9NXK6 330 aaPredicted RBP0.75□□□□□ -2.29
CHD9-211ENST00000564600 RPL26L1Q9UNX3 145 aaKnown RBP0.75□□□□□ -2.29
CHD9-211ENST00000564600 AMMECR1Q9Y4X0 333 aaPredicted RBP0.75□□□□□ -2.29
CHD9-211ENST00000564600 SBF1O95248 1867 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 KIF13BQ9NQT8 1826 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 CAMSAP1Q5T5Y3 1602 aa0.75□□□□□ -2.29
CHD9-211ENST00000564600 GLI3P10071 1580 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 HEATR5AQ86XA9 2040 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 MYH11P35749 1972 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 ROBO3Q96MS0 1386 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 IGKV1D-43A0A0B4J1Z2 117 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 TRAV38-1A0A0B4J264 116 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 TRAV26-2A0A0B4J265 109 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 GGT3PA6NGU5 568 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 SIGLEC16A6NMB1 481 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 HMSDA8MTL9 139 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 I3L521 148 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 SLC22A1O15245 554 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 ZNF682O95780 498 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 GPX1P07203 203 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 CYBAP13498 195 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 HIST1H2BOP23527 126 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 HIST1H2BBP33778 126 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 AKR1C3P42330 323 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 RPL5P46777 297 aaKnown RBP0.74□□□□□ -2.29
CHD9-211ENST00000564600 HINT1P49773 126 aaPredicted RBP0.74□□□□□ -2.29
CHD9-211ENST00000564600 CDK9P50750 372 aaKnown RBP0.74□□□□□ -2.29
CHD9-211ENST00000564600 HIST1H2BDP58876 126 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 TMEM258P61165 79 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 HIST1H2BCP62807 126 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 CTAG1AP78358 180 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 AESQ08117 197 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 HIST2H2BEQ16778 126 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.74□□□□□ -2.29
CHD9-211ENST00000564600 FAM27BQ5VT28 67 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 TEX36Q5VZQ5 186 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 ZNF705AQ6ZN79 300 aaPredicted RBP0.74□□□□□ -2.29
CHD9-211ENST00000564600 OOSP2Q86WS3 158 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 COA5Q86WW8 74 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 TRAPPC5Q8IUR0 188 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 TMEM86AQ8N2M4 240 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 TERB2Q8NHR7 220 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 HIST1H2BHQ93079 126 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 HIST1H2BNQ99877 126 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 HIST1H2BMQ99879 126 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 COMMD5Q9GZQ3 224 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 FAM96AQ9H5X1 160 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 FBXL12Q9NXK8 326 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 TIMM22Q9Y584 194 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 ADGRB2O60241 1585 aa0.74□□□□□ -2.29
CHD9-211ENST00000564600 DOCK5Q9H7D0 1870 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 ZFYVE9O95405 1425 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 RIC1Q4ADV7 1423 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 MED13Q9UHV7 2174 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 RTL1A6NKG5 1358 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 DOCK3Q8IZD9 2030 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 TGIF2-C20orf24A0A0A6YYL0 155 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 H3BT86 120 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 FAAHO00519 579 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 ZNF737O75373 536 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 PGLYRP1O75594 196 aaPredicted RBP0.73□□□□□ -2.29
CHD9-211ENST00000564600 OR2B3O76000 313 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 OR2J2O76002 312 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 RBP1P09455 135 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 HLA-DMBP28068 263 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 CCR2P41597 374 aa0.73□□□□□ -2.29
CHD9-211ENST00000564600 AP3S2P59780 193 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms