RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-210	ENST00000564582	STATH	P02808	62 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	COX8A	P10176	69 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	IGLL1	P15814	213 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	DRD3	P35462	400 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	CSN1S1	P47710	185 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	CYB561	P49447	251 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	CEBPD	P49716	269 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	LINC00205	P59089	165 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	ARF1	P84077	181 aa	Known RBP	4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	PSG9	Q00887	426 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	MPV17L2	Q567V2	206 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	TMEM97	Q5BJF2	176 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	TSPO2	Q5TGU0	170 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	PLCXD3	Q63HM9	321 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	TRAT1	Q6PIZ9	186 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	DGAT2L6	Q6ZPD8	337 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	SFTPA2	Q8IWL1	248 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	ZDHHC23	Q8IYP9	409 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	C9orf106	Q8NAJ2	232 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	GATS	Q8NAP1	163 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	C5orf17	Q8NAS9	161 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	OR51H1	Q8NH63	302 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	OR10G6	Q8NH81	332 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	PIFO	Q8TCI5	191 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	NEUROG1	Q92886	237 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	TMEM54	Q969K7	222 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	SPACA9	Q96E40	222 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	SPACA5	Q96QH8	159 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	TRPM6	Q9BX84	2022 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	GFRA4	Q9GZZ7	299 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	OR2D2	Q9H210	308 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	LIME1	Q9H400	295 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	SLC25A22	Q9H936	323 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	HES4	Q9HCC6	221 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	NPVF	Q9HCQ7	196 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	FGF21	Q9NSA1	209 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	CACNA1I	Q9P0X4	2223 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	ZNF257	Q9Y2Q1	563 aa		4.59	□□□□□ -1.67
CHD9-210	ENST00000564582	TCF20	Q9UGU0	1960 aa	Known RBP	4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	IGKV3D-11	A0A0A0MRZ8	115 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	ANKRD30BL	A7E2S9	258 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	SHISA9	B4DS77	424 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582		F5H5K5	113 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	SYS1-DBNDD2	H3BUS1	97 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582		M0QZ24	198 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	TNFRSF13B	O14836	293 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	LEPROTL1	O95214	131 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	CLPS	P04118	112 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	USF1	P22415	310 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	HTR1D	P28221	377 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	SRI	P30626	198 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	KIR2DS2	P43631	304 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	GPR12	P47775	334 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	LGALS7	P47929	136 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	RPL31	P62899	125 aa	Known RBP	4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	C5orf64	Q2M2E5	130 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	IBA57	Q5T440	356 aa	Known RBP	4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	LYRM7	Q5U5X0	104 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	FOXI2	Q6ZQN5	318 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	FGFRL1	Q8N441	504 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	TMEM251	Q8N6I4	163 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	ZNF441	Q8N8Z8	693 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	OR2M3	Q8NG83	312 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	OR1B1	Q8NGR6	318 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	C8orf46	Q8TAG6	207 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	LMX1A	Q8TE12	382 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	MMAB	Q96EY8	250 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	LYZL4	Q96KX0	146 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	HSD17B10	Q99714	261 aa	Known RBP	4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	NDFIP1	Q9BT67	221 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	VSIR	Q9H7M9	311 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	CCL28	Q9NRJ3	127 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	MRPL16	Q9NX20	251 aa	Known RBP	4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	CCL26	Q9Y258	94 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582		V9GYV3	84 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	DOCK9	Q9BZ29	2069 aa		4.58	□□□□□ -1.68
CHD9-210	ENST00000564582	FREM3	P0C091	2139 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	hADV38S2	A0JD32	116 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	LILRA5	A6NI73	299 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	C2orf70	A6NJV1	201 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582		A8MWL6	223 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	TMEM262	E9PQX1	116 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	BMPR1B	O00238	502 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	NTF3	P20783	257 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	CRYGS	P22914	178 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	GCHFR	P30047	84 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	PTGDS	P41222	190 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	CLDN17	P56750	224 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	CKS1B	P61024	79 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	KRTAP1-1	Q07627	177 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	TAL2	Q16559	108 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	ZNF585B	Q52M93	769 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	H2BFWT	Q7Z2G1	175 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	OR8I2	Q8N0Y5	310 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	OR4A5	Q8NH83	315 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	OR9G1	Q8NH87	305 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	OR1F12	Q8NHA8	337 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	ATP6V0E2	Q8NHE4	81 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	RNF138	Q8WVD3	245 aa		4.57	□□□□□ -1.68
CHD9-210	ENST00000564582	ADTRP	Q96IZ2	230 aa		4.57	□□□□□ -1.68

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