RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 LINC00114Q6XXX2 140 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 H1FXQ92522 213 aaKnown RBP5.29□□□□□ -1.56
CLK3-212ENST00000563418 SRD5A2P31213 254 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 LINC01555Q8NAE3 123 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 VN1R2Q8NFZ6 395 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 WIPF2Q8TF74 440 aaPredicted RBP5.29□□□□□ -1.56
CLK3-212ENST00000563418 ACYP1P07311 99 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 CCL2P13500 99 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 DSCR4P56555 118 aaPredicted RBP5.29□□□□□ -1.56
CLK3-212ENST00000563418 CLUHP3Q96NS8 147 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 MS4A18H0YCH9 400 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 H3BMM0 161 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 J3QT63 122 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 MS4A18Q3C1V0 323 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 TMEM155Q4W5P6 130 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 Q6ZSR6 202 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 ZNF296Q8WUU4 475 aaPredicted RBP5.29□□□□□ -1.56
CLK3-212ENST00000563418 UBE2WQ96B02 151 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 ZG16O60844 167 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 SRSF12Q8WXF0 261 aaKnown RBP5.29□□□□□ -1.56
CLK3-212ENST00000563418 AMELYQ99218 206 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 C6orf106Q9H6K1 298 aaPredicted RBP5.29□□□□□ -1.56
CLK3-212ENST00000563418 LYZP61626 148 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 TFF3Q07654 80 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 PLA2G3Q9NZ20 509 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 WIPI1Q5MNZ9 446 aaPredicted RBP5.29□□□□□ -1.56
CLK3-212ENST00000563418 PGPEP1Q9NXJ5 209 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 ZSWIM8A7E2V4 1837 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 MYO7AQ13402 2215 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 HMGA1P17096 107 aaKnown RBP5.29□□□□□ -1.56
CLK3-212ENST00000563418 CD40P25942 277 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 NUP37Q8NFH4 326 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 MRPS17Q9Y2R5 130 aaKnown RBP5.29□□□□□ -1.56
CLK3-212ENST00000563418 INSIG2Q9Y5U4 225 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 TNFSF14O43557 240 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 CGAP01215 116 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 IGHV3-7P01780 117 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 INAFM2P0DMQ5 153 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 CCL1P22362 96 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 CD38P28907 300 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 LEPP41159 167 aa5.29□□□□□ -1.56
CLK3-212ENST00000563418 RPP25LQ8N5L8 163 aaKnown RBP5.29□□□□□ -1.56
CLK3-212ENST00000563418 ORMDL2Q53FV1 153 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 VN1R4Q7Z5H5 301 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 PAQR4Q8N4S7 273 aaPredicted RBP5.28□□□□□ -1.56
CLK3-212ENST00000563418 ANAPC10Q9UM13 185 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 NAPSAO96009 420 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 CD33P20138 364 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 PRTN3P24158 256 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 KLF5Q13887 457 aaPredicted RBP5.28□□□□□ -1.56
CLK3-212ENST00000563418 SPANXN1Q5VSR9 72 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 ZNF56Q15929 161 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 FAM27BQ5VT28 67 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 CBLN3Q6UW01 205 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 SPAG8Q99932 426 aaPredicted RBP5.28□□□□□ -1.56
CLK3-212ENST00000563418 OR2H1Q9GZK4 316 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 TAX1BP3O14907 124 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 IGHG4P01861 327 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 SCTP09683 121 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 NMSQ5H8A3 153 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 TMEM171Q8WVE6 324 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 A0A1W2PRD5 423 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 A0A1W2PRF3 423 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 A0A1W2PRM7 423 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 RBP4P02753 201 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 EGR1P18146 543 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 NOGQ13253 232 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 LINC00696Q6ZRV3 163 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 ZNF714Q96N38 554 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 CDX4O14627 284 aaPredicted RBP5.28□□□□□ -1.56
CLK3-212ENST00000563418 OR2H2O95918 312 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 ZXDAP98168 799 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 CACNG8Q8WXS5 425 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 COQ2Q96H96 371 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 PNRC2Q9NPJ4 139 aaKnown RBP5.28□□□□□ -1.56
CLK3-212ENST00000563418 GGTLC3B5MD39 225 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 ZNF32P17041 273 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 C10orf128Q5T292 105 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 PTH2Q96A98 100 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 INSL6Q9Y581 213 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 KNTC1P50748 2209 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 A0A1W2PNR3 127 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 K7ESF4 209 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 C8orf46Q8TAG6 207 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 MRAPQ8TCY5 172 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 KIR2DL4Q99706 377 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 MOB4Q9Y3A3 225 aa5.28□□□□□ -1.56
CLK3-212ENST00000563418 CABIN1Q9Y6J0 2220 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 H0YJW9 148 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 LGALS9BQ3B8N2 356 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 LHX8Q68G74 356 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 LGALS9CQ6DKI2 356 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 COX14Q96I36 57 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 TBC1D29Q9UFV1 150 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 RP1P56715 2156 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 PGPA6NDG6 321 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 NUP35Q8NFH5 326 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 NAA38Q9BRA0 125 aaKnown RBP5.27□□□□□ -1.57
CLK3-212ENST00000563418 RALGAPA1Q6GYQ0 2036 aa5.27□□□□□ -1.57
CLK3-212ENST00000563418 GREB1Q4ZG55 1949 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms