RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 ZNF57Q68EA5 555 aaPredicted RBP12.68□□□□□ -0.38
CDT1-202ENST00000562747 FAM219AQ8IW50 185 aa12.68□□□□□ -0.38
CDT1-202ENST00000562747 OR1L6Q8NGR2 347 aa12.68□□□□□ -0.38
CDT1-202ENST00000562747 RBPMSQ93062 196 aaKnown RBP12.68□□□□□ -0.38
CDT1-202ENST00000562747 TMEM230Q96A57 120 aa12.68□□□□□ -0.38
CDT1-202ENST00000562747 EEF1AKMT3Q96AZ1 226 aa12.68□□□□□ -0.38
CDT1-202ENST00000562747 CXorf58Q96LI9 332 aa12.68□□□□□ -0.38
CDT1-202ENST00000562747 ELOVL1Q9BW60 279 aa12.68□□□□□ -0.38
CDT1-202ENST00000562747 KCNIP3Q9Y2W7 256 aa12.68□□□□□ -0.38
CDT1-202ENST00000562747 F11RQ9Y624 299 aaKnown RBP12.68□□□□□ -0.38
CDT1-202ENST00000562747 STAB2Q8WWQ8 2551 aa12.68□□□□□ -0.38
CDT1-202ENST00000562747 TRBV7-1A0A0A6YYK4 115 aa12.67□□□□□ -0.38
CDT1-202ENST00000562747 SAP30O75446 220 aa12.67□□□□□ -0.38
CDT1-202ENST00000562747 INPP1P49441 399 aa12.67□□□□□ -0.38
CDT1-202ENST00000562747 MECP2P51608 486 aaKnown RBP12.67□□□□□ -0.38
CDT1-202ENST00000562747 BAK1Q16611 211 aa12.67□□□□□ -0.38
CDT1-202ENST00000562747 IZUMO4Q1ZYL8 232 aa12.67□□□□□ -0.38
CDT1-202ENST00000562747 RNASE11Q8TAA1 199 aaKnown RBP12.67□□□□□ -0.38
CDT1-202ENST00000562747 SLC25A21Q9BQT8 299 aaPredicted RBP12.67□□□□□ -0.38
CDT1-202ENST00000562747 DMRT1Q9Y5R6 373 aa12.67□□□□□ -0.38
CDT1-202ENST00000562747 A0A0B4J293 547 aa12.66□□□□□ -0.38
CDT1-202ENST00000562747 BMPR1BO00238 502 aa12.66□□□□□ -0.38
CDT1-202ENST00000562747 TMEM187Q14656 261 aa12.66□□□□□ -0.38
CDT1-202ENST00000562747 SELENOHQ8IZQ5 122 aaKnown RBP12.66□□□□□ -0.38
CDT1-202ENST00000562747 OR2C3Q8N628 320 aa12.66□□□□□ -0.38
CDT1-202ENST00000562747 OR9G4Q8NGQ1 327 aa12.66□□□□□ -0.38
CDT1-202ENST00000562747 LHFPL5Q8TAF8 219 aa12.66□□□□□ -0.38
CDT1-202ENST00000562747 IL22RA2Q969J5 263 aa12.66□□□□□ -0.38
CDT1-202ENST00000562747 CCDC140Q96MF4 163 aa12.66□□□□□ -0.38
CDT1-202ENST00000562747 OR4C12Q96R67 309 aa12.66□□□□□ -0.38
CDT1-202ENST00000562747 SDHCQ99643 169 aaPredicted RBP12.66□□□□□ -0.38
CDT1-202ENST00000562747 TMEM56-RWDD3S4R434 201 aa12.66□□□□□ -0.38
CDT1-202ENST00000562747 U3KQK5 164 aa12.66□□□□□ -0.38
CDT1-202ENST00000562747 DNAH7Q8WXX0 4024 aa12.66□□□□□ -0.38
CDT1-202ENST00000562747 A0A0G2JRQ6 117 aa12.65□□□□□ -0.38
CDT1-202ENST00000562747 NAP1L6A6NFF2 107 aa12.65□□□□□ -0.38
CDT1-202ENST00000562747 GGCTO75223 188 aaKnown RBP12.65□□□□□ -0.38
CDT1-202ENST00000562747 AKR1C4P17516 323 aa12.65□□□□□ -0.38
CDT1-202ENST00000562747 SYNJ2BPP57105 145 aa12.65□□□□□ -0.38
CDT1-202ENST00000562747 TMEM268Q5VZI3 342 aa12.65□□□□□ -0.38
CDT1-202ENST00000562747 SLC25A24Q6NUK1 477 aa12.65□□□□□ -0.38
CDT1-202ENST00000562747 CLEC19AQ6UXS0 136 aa12.65□□□□□ -0.38
CDT1-202ENST00000562747 LINC00299Q6ZSB3 139 aa12.65□□□□□ -0.38
CDT1-202ENST00000562747 ZNF114Q8NC26 417 aa12.65□□□□□ -0.38
CDT1-202ENST00000562747 OR1P1Q8NH06 330 aa12.65□□□□□ -0.38
CDT1-202ENST00000562747 VN1R17PQ8TDU5 208 aa12.65□□□□□ -0.38
CDT1-202ENST00000562747 PDCD10Q9BUL8 212 aa12.65□□□□□ -0.38
CDT1-202ENST00000562747 PLEKHA3Q9HB20 300 aa12.65□□□□□ -0.38
CDT1-202ENST00000562747 PIGBOS1A0A0B4J2F0 54 aa12.64□□□□□ -0.39
CDT1-202ENST00000562747 MFSD2BA6NFX1 497 aa12.64□□□□□ -0.39
CDT1-202ENST00000562747 A6NHS1 94 aa12.64□□□□□ -0.39
CDT1-202ENST00000562747 PPP5D1E7EU14 171 aa12.64□□□□□ -0.39
CDT1-202ENST00000562747 INS-IGF2F8WCM5 200 aa12.64□□□□□ -0.39
CDT1-202ENST00000562747 ST8SIA3O43173 380 aa12.64□□□□□ -0.39
CDT1-202ENST00000562747 IGHV3-23P01764 117 aa12.64□□□□□ -0.39
CDT1-202ENST00000562747 ANXA3P12429 323 aa12.64□□□□□ -0.39
CDT1-202ENST00000562747 SUPT4H1P63272 117 aaKnown RBP12.64□□□□□ -0.39
CDT1-202ENST00000562747 ERHP84090 104 aaKnown RBP12.64□□□□□ -0.39
CDT1-202ENST00000562747 DCTN2Q13561 401 aaKnown RBP12.64□□□□□ -0.39
CDT1-202ENST00000562747 RBMS2Q15434 407 aaKnown RBP12.64□□□□□ -0.39
CDT1-202ENST00000562747 AARDQ4LEZ3 155 aa12.64□□□□□ -0.39
CDT1-202ENST00000562747 TMEM128Q5BJH2 165 aa12.64□□□□□ -0.39
CDT1-202ENST00000562747 ZNF502Q8TBZ5 544 aa12.64□□□□□ -0.39
CDT1-202ENST00000562747 PRR25Q96S07 402 aa12.64□□□□□ -0.39
CDT1-202ENST00000562747 PEMTQ9UBM1 199 aa12.64□□□□□ -0.39
CDT1-202ENST00000562747 LSM4Q9Y4Z0 139 aaKnown RBP12.64□□□□□ -0.39
CDT1-202ENST00000562747 S4R3C0 116 aa12.64□□□□□ -0.39
CDT1-202ENST00000562747 HUWE1Q7Z6Z7 4374 aaKnown RBP12.64□□□□□ -0.39
CDT1-202ENST00000562747 IFNA17P01571 189 aa12.63□□□□□ -0.39
CDT1-202ENST00000562747 ARL3P36405 182 aa12.63□□□□□ -0.39
CDT1-202ENST00000562747 MFAP2P55001 183 aa12.63□□□□□ -0.39
CDT1-202ENST00000562747 SRPXP78539 464 aa12.63□□□□□ -0.39
CDT1-202ENST00000562747 TMED4Q7Z7H5 227 aa12.63□□□□□ -0.39
CDT1-202ENST00000562747 SLC35G3Q8N808 338 aa12.63□□□□□ -0.39
CDT1-202ENST00000562747 ATP6V0BQ99437 205 aa12.63□□□□□ -0.39
CDT1-202ENST00000562747 C7orf50Q9BRJ6 194 aaKnown RBP12.63□□□□□ -0.39
CDT1-202ENST00000562747 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.63□□□□□ -0.39
CDT1-202ENST00000562747 SIGLEC8Q9NYZ4 499 aa12.63□□□□□ -0.39
CDT1-202ENST00000562747 ZNF256Q9Y2P7 627 aaPredicted RBP12.63□□□□□ -0.39
CDT1-202ENST00000562747 A0A0B4J2A0 478 aa12.62□□□□□ -0.39
CDT1-202ENST00000562747 CENPXA8MT69 81 aa12.62□□□□□ -0.39
CDT1-202ENST00000562747 CLEC3BP05452 202 aa12.62□□□□□ -0.39
CDT1-202ENST00000562747 NHLRC4P0CG21 123 aaPredicted RBP12.62□□□□□ -0.39
CDT1-202ENST00000562747 IL7P13232 177 aa12.62□□□□□ -0.39
CDT1-202ENST00000562747 IL34Q6ZMJ4 242 aa12.62□□□□□ -0.39
CDT1-202ENST00000562747 Q6ZRM9 215 aa12.62□□□□□ -0.39
CDT1-202ENST00000562747 GPHB5Q86YW7 130 aa12.62□□□□□ -0.39
CDT1-202ENST00000562747 LGI3Q8N145 548 aa12.62□□□□□ -0.39
CDT1-202ENST00000562747 OR52E5Q8NH55 327 aa12.62□□□□□ -0.39
CDT1-202ENST00000562747 GPR146Q96CH1 333 aa12.62□□□□□ -0.39
CDT1-202ENST00000562747 CACFD1Q9UGQ2 172 aa12.62□□□□□ -0.39
CDT1-202ENST00000562747 SHPKQ9UHJ6 478 aa12.62□□□□□ -0.39
CDT1-202ENST00000562747 LGALS9O00182 355 aa12.61□□□□□ -0.39
CDT1-202ENST00000562747 OR2C1O95371 312 aa12.61□□□□□ -0.39
CDT1-202ENST00000562747 IGLV1-51P01701 117 aa12.61□□□□□ -0.39
CDT1-202ENST00000562747 SPCS3P61009 180 aa12.61□□□□□ -0.39
CDT1-202ENST00000562747 CNPY1Q3B7I2 92 aa12.61□□□□□ -0.39
CDT1-202ENST00000562747 SPINK9Q5DT21 86 aa12.61□□□□□ -0.39
CDT1-202ENST00000562747 CENPSQ8N2Z9 138 aa12.61□□□□□ -0.39
CDT1-202ENST00000562747 ASCL2Q99929 193 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms