RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 RHOGP84095 191 aa7.56□□□□□ -1.2
CLK3-208ENST00000562626 SMCO1Q147U7 214 aa7.56□□□□□ -1.2
CLK3-208ENST00000562626 ZNF431Q8TF32 576 aaPredicted RBP7.56□□□□□ -1.2
CLK3-208ENST00000562626 WDR89Q96FK6 387 aaPredicted RBP7.56□□□□□ -1.2
CLK3-208ENST00000562626 UBE2E2Q96LR5 201 aa7.56□□□□□ -1.2
CLK3-208ENST00000562626 TMEM68Q96MH6 324 aa7.56□□□□□ -1.2
CLK3-208ENST00000562626 P2RX4Q99571 388 aa7.56□□□□□ -1.2
CLK3-208ENST00000562626 MARVELD1Q9BSK0 173 aa7.56□□□□□ -1.2
CLK3-208ENST00000562626 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.56□□□□□ -1.2
CLK3-208ENST00000562626 ZFP57Q9NU63 452 aa7.56□□□□□ -1.2
CLK3-208ENST00000562626 TGP01266 2768 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 IGHV3-21A0A0B4J1V1 117 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 DUXBA0A1W2PPF3 345 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 INMT-MINDY4F8WBC2 141 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 H3BUA1 57 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 M0QZ24 198 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 ATG12O94817 140 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 IFNA17P01571 189 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 IL5P05113 134 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 RNASE2P10153 161 aaKnown RBP7.55□□□□□ -1.2
CLK3-208ENST00000562626 DEFA1P59665 94 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 DEFA3P59666 94 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 PDLIM3Q53GG5 364 aaPredicted RBP7.55□□□□□ -1.2
CLK3-208ENST00000562626 PRR31Q5SQ13 230 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 TMEM65Q6PI78 240 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 C4orf3Q8WVX3 66 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 ZNF414Q96IQ9 312 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 CCDC140Q96MF4 163 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 RBKSQ9H477 322 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 SLA2Q9H6Q3 261 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 PLEKHA3Q9HB20 300 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 FKBP11Q9NYL4 201 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 HSPB7Q9UBY9 170 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 F11RQ9Y624 299 aaKnown RBP7.55□□□□□ -1.2
CLK3-208ENST00000562626 DNAH3Q8TD57 4116 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 MEGF8Q7Z7M0 2845 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 NOTCH3Q9UM47 2321 aa7.55□□□□□ -1.2
CLK3-208ENST00000562626 A0A1B0GU03 582 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 ANKRD34BA5PLL1 514 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 F8W735 103 aaPredicted RBP7.54□□□□□ -1.2
CLK3-208ENST00000562626 K7EIM0 57 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 IGHV3-48P01763 117 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 LGALS1P09382 135 aaKnown RBP7.54□□□□□ -1.2
CLK3-208ENST00000562626 SLURP1P55000 103 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 SPCS3P61009 180 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 TNFRSF9Q07011 255 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 FHL3Q13643 280 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 EXOSC2Q13868 293 aaKnown RBP7.54□□□□□ -1.2
CLK3-208ENST00000562626 C15orf32Q32M92 178 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 BSXQ3C1V8 233 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 THOC7Q6I9Y2 204 aaKnown RBP7.54□□□□□ -1.2
CLK3-208ENST00000562626 PLET1Q6UQ28 207 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 MRPL41Q8IXM3 137 aaKnown RBP7.54□□□□□ -1.2
CLK3-208ENST00000562626 C12orf45Q8N5I9 185 aaPredicted RBP7.54□□□□□ -1.2
CLK3-208ENST00000562626 LINC00482Q8N8I6 264 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 ZNF114Q8NC26 417 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 OR52E5Q8NH55 327 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 OR1S1Q8NH92 325 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 COQ8AQ8NI60 647 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 SRSF8Q9BRL6 282 aaKnown RBP7.54□□□□□ -1.2
CLK3-208ENST00000562626 MAGT1Q9H0U3 335 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 PALMDQ9NP74 551 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 MRPL36Q9P0J6 103 aaKnown RBP7.54□□□□□ -1.2
CLK3-208ENST00000562626 FBXL7Q9UJT9 491 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 TMED3Q9Y3Q3 217 aa7.54□□□□□ -1.2
CLK3-208ENST00000562626 PPP5D1E7EU14 171 aa7.53□□□□□ -1.2
CLK3-208ENST00000562626 INS-IGF2F8WCM5 200 aa7.53□□□□□ -1.2
CLK3-208ENST00000562626 CCL24O00175 119 aa7.53□□□□□ -1.2
CLK3-208ENST00000562626 SIX6O95475 246 aa7.53□□□□□ -1.2
CLK3-208ENST00000562626 PTTG1O95997 202 aa7.53□□□□□ -1.2
CLK3-208ENST00000562626 HOXA1P49639 335 aaPredicted RBP7.53□□□□□ -1.2
CLK3-208ENST00000562626 RUNX1Q01196 453 aa7.53□□□□□ -1.2
CLK3-208ENST00000562626 DCTN2Q13561 401 aaKnown RBP7.53□□□□□ -1.2
CLK3-208ENST00000562626 MLANAQ16655 118 aa7.53□□□□□ -1.2
CLK3-208ENST00000562626 PVRIGQ6DKI7 326 aa7.53□□□□□ -1.2
CLK3-208ENST00000562626 SLC25A24Q6NUK1 477 aa7.53□□□□□ -1.2
CLK3-208ENST00000562626 ZNF343Q6P1L6 599 aa7.53□□□□□ -1.2
CLK3-208ENST00000562626 TREML4Q6UXN2 200 aa7.53□□□□□ -1.2
CLK3-208ENST00000562626 UXS1Q8NBZ7 420 aa7.53□□□□□ -1.2
CLK3-208ENST00000562626 NECAP1Q8NC96 275 aa7.53□□□□□ -1.2
CLK3-208ENST00000562626 OR11H1Q8NG94 326 aa7.53□□□□□ -1.2
CLK3-208ENST00000562626 OR4D5Q8NGN0 318 aa7.53□□□□□ -1.2
CLK3-208ENST00000562626 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.52□□□□□ -1.21
CLK3-208ENST00000562626 C13orf42A0A1B0GVH6 325 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 C7orf66A4D0T2 115 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 FAM223BA6NKX1 122 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 CEBPZOSA8MTT3 80 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 I3L2K1 104 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 BMPR1BO00238 502 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 TMEM50AO95807 157 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 IAPPP10997 89 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 SLC25A6P12236 298 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 DEFA4P12838 97 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 EDN2P20800 178 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 ATP5G2Q06055 141 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 HSD17B13Q7Z5P4 300 aaPredicted RBP7.52□□□□□ -1.21
CLK3-208ENST00000562626 FAM223AQ8IWN6 122 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 ZBTB8BQ8NAP8 495 aaPredicted RBP7.52□□□□□ -1.21
CLK3-208ENST00000562626 OR4F17Q8NGA8 305 aa7.52□□□□□ -1.21
CLK3-208ENST00000562626 OR1N2Q8NGR9 330 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms