RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 FAM209BQ5JX69 171 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 SLC25A24Q6NUK1 477 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 LPCAT3Q6P1A2 487 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 Q6ZRM9 215 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 OR2C3Q8N628 320 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 DEFB125Q8N687 156 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 UXS1Q8NBZ7 420 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 SCARB1Q8WTV0 552 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 SOSTQ9BQB4 213 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 RTBDNQ9BSG5 229 aaPredicted RBP9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 ZNF436Q9C0F3 470 aaPredicted RBP9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 C6orf62Q9GZU0 229 aaPredicted RBP9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 RBM38Q9H0Z9 239 aaKnown RBP9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 FAM212BQ9NTI7 297 aaPredicted RBP9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 PRNDQ9UKY0 176 aa9.51□□□□□ -0.89
CHRNA3-208ENST00000561128 C3orf85A0A1B0GTC6 90 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 RBMY1BA6NDE4 496 aaKnown RBP9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 RBMY1EA6NEQ0 496 aaKnown RBP9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 I3L2K1 104 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 ST8SIA3O43173 380 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 ZNF207O43670 478 aaKnown RBP9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 SCAF4O95104 1147 aaKnown RBP9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 IFNA6P05013 189 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 RBMY1DP0C7P1 496 aaKnown RBP9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 PRCDQ00LT1 54 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 IL18Q14116 193 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 HAGHQ16775 308 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 TATDN3Q17R31 274 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 THOC7Q6I9Y2 204 aaKnown RBP9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 LINC00322Q6ZN03 302 aaPredicted RBP9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 H2BFWTQ7Z2G1 175 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 OR5B3Q8NH48 314 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 TERB2Q8NHR7 220 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 VN1R17PQ8TDU5 208 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 TMEM190Q8WZ59 177 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 TMEM230Q96A57 120 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 DIRAS2Q96HU8 199 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 CXorf58Q96LI9 332 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 NEURL2Q9BR09 285 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 NXF2Q9GZY0 626 aaKnown RBP9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 C5orf66Q9H5L9 145 aa9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 MRPL36Q9P0J6 103 aaKnown RBP9.5□□□□□ -0.89
CHRNA3-208ENST00000561128 CTDSPLO15194 276 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 TPPPO94811 219 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 CTSDP07339 412 aaPredicted RBP9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 OR5AC1P0C628 307 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 UCP1P25874 307 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 TNFSF8P32971 234 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 GUCA2BQ16661 112 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 PLET1Q6UQ28 207 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 SGPP2Q8IWX5 399 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 UBAC2Q8NBM4 344 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 OR2K2Q8NGT1 345 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 TRIM63Q969Q1 353 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 MISP3Q96FF7 219 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 ZNF486Q96H40 463 aaPredicted RBP9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 CITED4Q96RK1 184 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 FAM110AQ9BQ89 295 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 BCL7BQ9BQE9 202 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 C21orf62Q9NYP8 219 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 V9GYH0 126 aa9.49□□□□□ -0.89
CHRNA3-208ENST00000561128 KMT2CQ8NEZ4 4911 aaKnown RBP9.48□□□□□ -0.89
CHRNA3-208ENST00000561128 ANKRD20A5PA0PJZ0 165 aa9.48□□□□□ -0.89
CHRNA3-208ENST00000561128 GSTZ1O43708 216 aaPredicted RBP9.48□□□□□ -0.89
CHRNA3-208ENST00000561128 C8orf88P0DMB2 117 aa9.48□□□□□ -0.89
CHRNA3-208ENST00000561128 AKR1C2P52895 323 aa9.48□□□□□ -0.89
CHRNA3-208ENST00000561128 ZNF79Q15937 498 aa9.48□□□□□ -0.89
CHRNA3-208ENST00000561128 GTSCR1Q86UQ5 136 aa9.48□□□□□ -0.89
CHRNA3-208ENST00000561128 ZNF114Q8NC26 417 aa9.48□□□□□ -0.89
CHRNA3-208ENST00000561128 OR51S1Q8NGJ8 323 aa9.48□□□□□ -0.89
CHRNA3-208ENST00000561128 OR1P1Q8NH06 330 aa9.48□□□□□ -0.89
CHRNA3-208ENST00000561128 OR4A16Q8NH70 328 aa9.48□□□□□ -0.89
CHRNA3-208ENST00000561128 TSC22D3Q99576 134 aa9.48□□□□□ -0.89
CHRNA3-208ENST00000561128 GAR1Q9NY12 217 aaKnown RBP9.48□□□□□ -0.89
CHRNA3-208ENST00000561128 IGHV3-49A0A0A0MS15 119 aa9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 NXPH3O95157 252 aa9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 MT-CO2P00403 227 aa9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 CTSGP08311 255 aa9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 AKAIN1P0CW23 69 aa9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 RNASE2P10153 161 aaKnown RBP9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 S100GP29377 79 aa9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 HSPE1P61604 102 aaKnown RBP9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 MRPS10P82664 201 aaKnown RBP9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 MEF2DQ14814 521 aa9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 TRIM16LQ309B1 348 aa9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 ZNF57Q68EA5 555 aaPredicted RBP9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 HSD17B13Q7Z5P4 300 aaPredicted RBP9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 MCFD2Q8NI22 146 aa9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 GLYATL2Q8WU03 294 aa9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 BSCL2Q96G97 398 aaPredicted RBP9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 TMEM56Q96MV1 263 aa9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 NAA60Q9H7X0 242 aa9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 SRD5A3Q9H8P0 318 aa9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 EDA2RQ9HAV5 297 aa9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 COPZ2Q9P299 210 aa9.47□□□□□ -0.89
CHRNA3-208ENST00000561128 CRYM-AS1A6NIL9 109 aa9.46□□□□□ -0.9
CHRNA3-208ENST00000561128 ETV6P41212 452 aa9.46□□□□□ -0.9
CHRNA3-208ENST00000561128 SSBP1Q04837 148 aaKnown RBP9.46□□□□□ -0.9
CHRNA3-208ENST00000561128 FAM106AQ4KMX7 169 aa9.46□□□□□ -0.9
CHRNA3-208ENST00000561128 Q56UQ5 140 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms