RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 WISP2O76076 250 aa13.58□□□□□ -0.23
TPM1-228ENST00000560975 LINC00869P0C866 280 aa13.58□□□□□ -0.23
TPM1-228ENST00000560975 CA7P43166 264 aa13.58□□□□□ -0.23
TPM1-228ENST00000560975 CAMPP49913 170 aa13.58□□□□□ -0.23
TPM1-228ENST00000560975 TMPRSS3P57727 454 aa13.58□□□□□ -0.23
TPM1-228ENST00000560975 GDF5OSQ5U4N7 250 aa13.58□□□□□ -0.23
TPM1-228ENST00000560975 OR8B2Q96RD0 313 aa13.58□□□□□ -0.23
TPM1-228ENST00000560975 CST9LQ9H4G1 147 aa13.58□□□□□ -0.23
TPM1-228ENST00000560975 ZNF355PQ9NSJ1 428 aa13.58□□□□□ -0.23
TPM1-228ENST00000560975 IL11RAQ14626 422 aa13.58□□□□□ -0.24
TPM1-228ENST00000560975 OR4A47Q6IF82 309 aa13.58□□□□□ -0.24
TPM1-228ENST00000560975 WDR31Q8NA23 367 aa13.58□□□□□ -0.24
TPM1-228ENST00000560975 OR8B3Q8NGG8 313 aa13.58□□□□□ -0.24
TPM1-228ENST00000560975 GSX1Q9H4S2 264 aaPredicted RBP13.58□□□□□ -0.24
TPM1-228ENST00000560975 GNG12Q9UBI6 72 aa13.58□□□□□ -0.24
TPM1-228ENST00000560975 ARL2-SNX15V9GYD0 113 aa13.58□□□□□ -0.24
TPM1-228ENST00000560975 PRR14LQ5THK1 2151 aa13.58□□□□□ -0.24
TPM1-228ENST00000560975 DMDP11532 3685 aa13.58□□□□□ -0.24
TPM1-228ENST00000560975 NUDT3O95989 172 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 NPY1RP25929 384 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 NABP2Q9BQ15 211 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 TNFRSF19Q9NS68 423 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 MRPL27Q9P0M9 148 aaKnown RBP13.57□□□□□ -0.24
TPM1-228ENST00000560975 SLC25A40Q8TBP6 338 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 ZNF503Q96F45 646 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 DUSP23Q9BVJ7 150 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 PRRC2CQ9Y520 2896 aaKnown RBP13.57□□□□□ -0.24
TPM1-228ENST00000560975 hDV102S1A0JD36 115 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 C2orf70A6NJV1 201 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 ARG2P78540 354 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 TBR1Q16650 682 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 OCIAD2Q56VL3 154 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 ZNF766Q5HY98 468 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 PRR27Q6MZM9 219 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 VHLLQ6RSH7 139 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 OR52E5Q8NH55 327 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 TMEM167BQ9NRX6 74 aa13.57□□□□□ -0.24
TPM1-228ENST00000560975 TAX1BP3O14907 124 aa13.56□□□□□ -0.24
TPM1-228ENST00000560975 SRFP11831 508 aa13.56□□□□□ -0.24
TPM1-228ENST00000560975 MAGEA5P43359 124 aa13.56□□□□□ -0.24
TPM1-228ENST00000560975 DUSP3P51452 185 aaPredicted RBP13.56□□□□□ -0.24
TPM1-228ENST00000560975 AMMECR1LQ6DCA0 310 aa13.56□□□□□ -0.24
TPM1-228ENST00000560975 PPP1R32Q7Z5V6 425 aa13.56□□□□□ -0.24
TPM1-228ENST00000560975 SP1P08047 785 aa13.56□□□□□ -0.24
TPM1-228ENST00000560975 PRR20EP86478 221 aa13.56□□□□□ -0.24
TPM1-228ENST00000560975 PRR20CP86479 221 aa13.56□□□□□ -0.24
TPM1-228ENST00000560975 PRR20DP86480 221 aa13.56□□□□□ -0.24
TPM1-228ENST00000560975 PRR20BP86481 221 aa13.56□□□□□ -0.24
TPM1-228ENST00000560975 PRR20AP86496 221 aa13.56□□□□□ -0.24
TPM1-228ENST00000560975 TBC1D28Q2M2D7 210 aa13.56□□□□□ -0.24
TPM1-228ENST00000560975 OR2T6Q8NHC8 308 aa13.56□□□□□ -0.24
TPM1-228ENST00000560975 BOKQ9UMX3 212 aaPredicted RBP13.56□□□□□ -0.24
TPM1-228ENST00000560975 AHCTF1Q8WYP5 2266 aa13.56□□□□□ -0.24
TPM1-228ENST00000560975 OR4C46A6NHA9 309 aa13.55□□□□□ -0.24
TPM1-228ENST00000560975 SPINT2O43291 252 aa13.55□□□□□ -0.24
TPM1-228ENST00000560975 PPBPP02775 128 aa13.55□□□□□ -0.24
TPM1-228ENST00000560975 CD24P25063 80 aa13.55□□□□□ -0.24
TPM1-228ENST00000560975 SMIM15Q7Z3B0 74 aa13.55□□□□□ -0.24
TPM1-228ENST00000560975 ZC2HC1AQ96GY0 325 aa13.55□□□□□ -0.24
TPM1-228ENST00000560975 TNCP24821 2201 aa13.55□□□□□ -0.24
TPM1-228ENST00000560975 MUC21A0A0G2JKD1 596 aa13.55□□□□□ -0.24
TPM1-228ENST00000560975 MUC21A0A140T8X8 626 aa13.55□□□□□ -0.24
TPM1-228ENST00000560975 SMPD2O60906 423 aa13.55□□□□□ -0.24
TPM1-228ENST00000560975 PPOXP50336 477 aa13.55□□□□□ -0.24
TPM1-228ENST00000560975 LRRC10Q5BKY1 277 aa13.55□□□□□ -0.24
TPM1-228ENST00000560975 MUC21Q5SSG8 566 aa13.55□□□□□ -0.24
TPM1-228ENST00000560975 LINC00173Q6ZV60 143 aa13.55□□□□□ -0.24
TPM1-228ENST00000560975 IGF2BP2-AS1Q96M15 143 aa13.55□□□□□ -0.24
TPM1-228ENST00000560975 PTPRBP23467 1997 aa13.55□□□□□ -0.24
TPM1-228ENST00000560975 CER1O95813 267 aa13.54□□□□□ -0.24
TPM1-228ENST00000560975 NUP35Q8NFH5 326 aa13.54□□□□□ -0.24
TPM1-228ENST00000560975 LEAP2Q969E1 77 aa13.54□□□□□ -0.24
TPM1-228ENST00000560975 S1PR3Q99500 378 aa13.54□□□□□ -0.24
TPM1-228ENST00000560975 MCRIP2Q9BUT9 160 aaKnown RBP13.54□□□□□ -0.24
TPM1-228ENST00000560975 ENY2Q9NPA8 101 aa13.54□□□□□ -0.24
TPM1-228ENST00000560975 MPV17P39210 176 aa13.54□□□□□ -0.24
TPM1-228ENST00000560975 TRAT1Q6PIZ9 186 aa13.54□□□□□ -0.24
TPM1-228ENST00000560975 FZR1Q9UM11 496 aa13.54□□□□□ -0.24
TPM1-228ENST00000560975 ACP7Q6ZNF0 438 aa13.54□□□□□ -0.24
TPM1-228ENST00000560975 SAP25Q8TEE9 199 aa13.54□□□□□ -0.24
TPM1-228ENST00000560975 TRIB1Q96RU8 372 aa13.54□□□□□ -0.24
TPM1-228ENST00000560975 TMEM70Q9BUB7 260 aa13.54□□□□□ -0.24
TPM1-228ENST00000560975 SAP30LQ9HAJ7 183 aa13.54□□□□□ -0.24
TPM1-228ENST00000560975 SELENOKQ9Y6D0 94 aa13.54□□□□□ -0.24
TPM1-228ENST00000560975 H0Y8G0 127 aa13.53□□□□□ -0.24
TPM1-228ENST00000560975 CORTO00230 105 aa13.53□□□□□ -0.24
TPM1-228ENST00000560975 FOXA3P55318 350 aaPredicted RBP13.53□□□□□ -0.24
TPM1-228ENST00000560975 MLANAQ16655 118 aa13.53□□□□□ -0.24
TPM1-228ENST00000560975 LYSMD4Q5XG99 296 aa13.53□□□□□ -0.24
TPM1-228ENST00000560975 SLC25A10Q9UBX3 287 aaPredicted RBP13.53□□□□□ -0.24
TPM1-228ENST00000560975 TRAV5A0A0B4J249 113 aa13.53□□□□□ -0.24
TPM1-228ENST00000560975 PLGLB1Q02325 96 aa13.53□□□□□ -0.24
TPM1-228ENST00000560975 UTF1Q5T230 341 aa13.53□□□□□ -0.24
TPM1-228ENST00000560975 ZNF841Q6ZN19 808 aa13.53□□□□□ -0.24
TPM1-228ENST00000560975 C11orf53Q8IXP5 236 aa13.53□□□□□ -0.24
TPM1-228ENST00000560975 BCL2L2Q92843 193 aaPredicted RBP13.53□□□□□ -0.24
TPM1-228ENST00000560975 RHOGP84095 191 aa13.52□□□□□ -0.24
TPM1-228ENST00000560975 BVES-AS1Q5T3Y7 98 aa13.52□□□□□ -0.24
TPM1-228ENST00000560975 SNRNP40Q96DI7 357 aaKnown RBP13.52□□□□□ -0.24
TPM1-228ENST00000560975 TIMM8BQ9Y5J9 83 aaPredicted RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms