RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, human

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERC1-208	ENST00000560462	PAX5	Q02548	391 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	PJVK	Q0ZLH3	352 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	KLF9	Q13886	244 aa	Predicted RBP	4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	BCL2L15	Q5TBC7	163 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	NXNL2	Q5VZ03	156 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	GLT8D1	Q68CQ7	371 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	DEGS2	Q6QHC5	323 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	ZNF322	Q6U7Q0	402 aa	Predicted RBP	4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	PLEKHG7	Q6ZR37	379 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	SLC35F2	Q8IXU6	374 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	PLPPR1	Q8TBJ4	325 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	CIRBP-AS1	Q8TBR5	109 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	ASB17	Q8WXJ9	295 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	TMEM37	Q8WXS4	190 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	PPP1R14B	Q96C90	147 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	BORCS8	Q96FH0	119 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	CXorf58	Q96LI9	332 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	RNF5	Q99942	180 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	ENOPH1	Q9UHY7	261 aa		4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	DIMT1	Q9UNQ2	313 aa	Known RBP	4.27	□□□□□ -1.73
HERC1-208	ENST00000560462	IGHV3-35	A0A0C4DH35	117 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	RNF222	A6NCQ9	220 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	SMIM9	A6NGZ8	99 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	OR5H14	A6NHG9	310 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	SRRM4	A7MD48	611 aa	Known RBP	4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	ZNF670-ZNF695	F2Z2N8	137 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	MAGEB4	O15481	346 aa	Predicted RBP	4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	CRYGC	P07315	174 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	RPA2	P15927	270 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	UBE2V2	Q15819	145 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	ATP6AP1	Q15904	470 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	AADACL4	Q5VUY2	407 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	C12orf73	Q69YU5	71 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	ZNF833P	Q6ZTB9	187 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	SSX6	Q7RTT6	188 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	LRRTM1	Q86UE6	522 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	GID4	Q8IVV7	300 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462		Q8N814	137 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	RBPMS	Q93062	196 aa	Known RBP	4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	MRPS24	Q96EL2	167 aa	Known RBP	4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	NRBF2	Q96F24	287 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	LINC01600	Q96MT4	127 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	OR2A7	Q96R45	310 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	IL4I1	Q96RQ9	567 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	TBX5	Q99593	518 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	TSNAX	Q99598	290 aa	Known RBP	4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	APOL4	Q9BPW4	351 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	C1QTNF4	Q9BXJ3	329 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	GABARAPL1	Q9H0R8	117 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	S100A14	Q9HCY8	104 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	CLN6	Q9NWW5	311 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	OR52A1	Q9UKL2	312 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	WASHC3	Q9Y3C0	194 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462	RFNG	Q9Y644	331 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462		R4GMQ9	66 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462		S4R3C0	116 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462		V9GYS6	101 aa		4.26	□□□□□ -1.73
HERC1-208	ENST00000560462		A0A1B0GTI1	187 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	LOC107986453	A0A1B0GWG9	222 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	DHRS7C	A6NNS2	312 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462		G3V2T6	193 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	ORC5	O43913	435 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	RPP14	O95059	124 aa	Known RBP	4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	IGLV2-11	P01706	119 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	CCL1	P22362	96 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	PSMB6	P28072	239 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	ACTR3	P61158	418 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	PAFAH1B2	P68402	229 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	MRPL28	Q13084	256 aa	Known RBP	4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	ESRG	Q1W209	222 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	KRTAP15-1	Q3LI76	137 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	LRRC37A5P	Q49AS3	106 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	KDM4D	Q6B0I6	523 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462		Q6ZSR3	168 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	ZNF383	Q8NA42	475 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	TMEM190	Q8WZ59	177 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	C4orf36	Q96KX1	117 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	RNF2	Q99496	336 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	CIB1	Q99828	191 aa		4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.25	□□□□□ -1.73
HERC1-208	ENST00000560462	SAA2-SAA4	A0A096LPE2	208 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	IGKV1-12	A0A0C4DH73	117 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462		A0A1W2PQL4	384 aa	Predicted RBP	4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	XKRY2	A2RUG3	117 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	LRCOL1	A6NCL2	159 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.24	□□□□□ -1.73
HERC1-208	ENST00000560462		H0Y8G0	127 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462		H0YJW9	148 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	SIVA1	O15304	175 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	GATB	O75879	557 aa	Known RBP	4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	IGKV1D-12	P01611	117 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	ZNF705D	P0CH99	300 aa	Predicted RBP	4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	ZNF705B	P0CI00	300 aa	Predicted RBP	4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	SAA2	P0DJI9	122 aa	Predicted RBP	4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	KCNJ3	P48549	501 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	RBP2	P50120	134 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	C1orf146	Q5VVC0	180 aa		4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.24	□□□□□ -1.73
HERC1-208	ENST00000560462	FAM220A	Q7Z4H9	259 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 541.8 ms