RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 SLC17A3O00476 420 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 ZG16O60844 167 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 RHBDL1O75783 438 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 NEURL1O76050 574 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 SP9P0CG40 484 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 PSG1P11464 419 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 LIFP15018 202 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 GABRG2P18507 467 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 USF1P22415 310 aaPredicted RBP4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 GNG4P50150 75 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 FOXL2P58012 376 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 GNG3P63215 75 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 RBPJQ06330 500 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 RAB31Q13636 194 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 CENPWQ5EE01 88 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 ZNF766Q5HY98 468 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 SPATA46Q5T0L3 261 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 C9orf135Q5VTT2 229 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 Q6P435 159 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 INO80CQ6PI98 192 aaPredicted RBP4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 CLEC2AQ6UVW9 174 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 H2BFWTQ7Z2G1 175 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 MRPL21Q7Z2W9 205 aaKnown RBP4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 OR5A1Q8NGJ0 315 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 ZNF596Q8TC21 504 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 DEFB118Q96PH6 123 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 HSD17B10Q99714 261 aaKnown RBP4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 FGF23Q9GZV9 251 aaPredicted RBP4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 NPVFQ9HCQ7 196 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 SH2D2AQ9NP31 389 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 PLSCR4Q9NRQ2 329 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 OR1A1Q9P1Q5 309 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 MMP17Q9ULZ9 603 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 PPP1R3CQ9UQK1 317 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 LSM4Q9Y4Z0 139 aaKnown RBP4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 YTHDF2Q9Y5A9 579 aaKnown RBP4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 PRRC2BQ5JSZ5 2229 aaKnown RBP4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 SRCAPQ6ZRS2 3230 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 DOCK8Q8NF50 2099 aa4.9□□□□□ -1.63
SNRPA1-209ENST00000560307 ALPK2Q86TB3 2170 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 IGHV1OR21-1A0A087WYE8 117 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 TRAV38-1A0A0B4J264 116 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 A0A1W2PRE2 83 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 GAGE12BA1L429 117 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 HELTA6NFD8 242 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 OR4C46A6NHA9 309 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 ZNF716A6NP11 495 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 LMO7DNF2Z398 122 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 H3BRM9 83 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 HAND1O96004 215 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 KIR2DS2P43631 304 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 PPOXP50336 477 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 ATP5IP56385 69 aaPredicted RBP4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 NXPH1P58417 271 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 TAS2R45P59539 299 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 PSG9Q00887 426 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 ZNF542PQ5EBM4 170 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 IBA57Q5T440 356 aaKnown RBP4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 SLC35E4Q6ICL7 350 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 UFSP1Q6NVU6 142 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 EBLN2Q6P2I7 272 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 TRAT1Q6PIZ9 186 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 PQLC2Q6ZP29 291 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 C16orf47Q6ZP98 133 aaPredicted RBP4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 AAED1Q7RTV5 226 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 LHFPL4Q7Z7J7 247 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 FER1L6-AS1Q8NA97 138 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 NHLRC2Q8NBF2 726 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 TMEM190Q8WZ59 177 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 IGF2BP2-AS1Q96M15 143 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 MGST2Q99735 147 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 ZNF430Q9H8G1 570 aaPredicted RBP4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 SCRT2Q9NQ03 307 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 OCIAD1Q9NX40 245 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 SMPXQ9UHP9 88 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 TRAPPC2LQ9UL33 140 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 RPH3ALQ9UNE2 315 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 POLDIP2Q9Y2S7 368 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 OR51B2Q9Y5P1 312 aa4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 CHCHD2Q9Y6H1 151 aaPredicted RBP4.89□□□□□ -1.63
SNRPA1-209ENST00000560307 PCDH15Q96QU1 1955 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 LOC102723996A0A087X1L8 192 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 A0A0J9YW62 118 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 TMEM30CPA0ZSE6 113 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 GAGE12HA6NDE8 117 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 GAGE10A6NGK3 116 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 OOEPA6NGQ2 149 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 ANKRD30BLA7E2S9 258 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 NPIPB5A8MRT5 1133 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 C21orf140B9A014 251 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 SYS1-DBNDD2H3BUS1 97 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 RRHO14718 337 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 OR7C2O60412 319 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 SMPD2O60906 423 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 HBZP02008 142 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 CCL5P13501 91 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 NTF3P20783 257 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 G6PCP35575 357 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 VDAC2P45880 294 aaPredicted RBP4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 GPR6P46095 362 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms