RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 POLR2GP62487 172 aaKnown RBP eCLIP16.13■□□□□ 0.17
PSEN1-225ENST00000560005 TNFRSF9Q07011 255 aa16.13■□□□□ 0.17
PSEN1-225ENST00000560005 VMA21Q3ZAQ7 101 aa16.13■□□□□ 0.17
PSEN1-225ENST00000560005 CLCC1Q96S66 551 aa16.13■□□□□ 0.17
PSEN1-225ENST00000560005 PLSCR3Q9NRY6 295 aa16.13■□□□□ 0.17
PSEN1-225ENST00000560005 PRNDQ9UKY0 176 aa16.13■□□□□ 0.17
PSEN1-225ENST00000560005 BOLA1Q9Y3E2 137 aa16.13■□□□□ 0.17
PSEN1-225ENST00000560005 WSB1Q9Y6I7 421 aa16.13■□□□□ 0.17
PSEN1-225ENST00000560005 SCAF4O95104 1147 aaKnown RBP16.12■□□□□ 0.17
PSEN1-225ENST00000560005 AP2S1P53680 142 aaPredicted RBP16.12■□□□□ 0.17
PSEN1-225ENST00000560005 SPCS3P61009 180 aa16.12■□□□□ 0.17
PSEN1-225ENST00000560005 EIF5AP63241 154 aaKnown RBP16.12■□□□□ 0.17
PSEN1-225ENST00000560005 OR4A47Q6IF82 309 aa16.12■□□□□ 0.17
PSEN1-225ENST00000560005 SSX9Q7RTT3 188 aa16.12■□□□□ 0.17
PSEN1-225ENST00000560005 SMIM8Q96KF7 97 aa16.12■□□□□ 0.17
PSEN1-225ENST00000560005 HARBI1Q96MB7 349 aa16.12■□□□□ 0.17
PSEN1-225ENST00000560005 TSNAXQ99598 290 aaKnown RBP16.12■□□□□ 0.17
PSEN1-225ENST00000560005 MCRIP2Q9BUT9 160 aaKnown RBP16.12■□□□□ 0.17
PSEN1-225ENST00000560005 RNF222A6NCQ9 220 aa16.11■□□□□ 0.17
PSEN1-225ENST00000560005 SSSCA1O60232 199 aa16.11■□□□□ 0.17
PSEN1-225ENST00000560005 UBE2KP61086 200 aa16.11■□□□□ 0.17
PSEN1-225ENST00000560005 CASC10Q5T4H9 136 aa16.11■□□□□ 0.17
PSEN1-225ENST00000560005 SLC51BQ86UW2 128 aa16.11■□□□□ 0.17
PSEN1-225ENST00000560005 OR2C3Q8N628 320 aa16.11■□□□□ 0.17
PSEN1-225ENST00000560005 ARPC5LQ9BPX5 153 aa16.11■□□□□ 0.17
PSEN1-225ENST00000560005 LYRM2Q9NU23 88 aaPredicted RBP16.11■□□□□ 0.17
PSEN1-225ENST00000560005 LYSTQ99698 3801 aa16.1■□□□□ 0.17
PSEN1-225ENST00000560005 UPK2O00526 184 aa16.1■□□□□ 0.17
PSEN1-225ENST00000560005 BCL2L11O43521 198 aa16.1■□□□□ 0.17
PSEN1-225ENST00000560005 TSC22D2O75157 780 aa16.1■□□□□ 0.17
PSEN1-225ENST00000560005 IGKV1-16P04430 117 aa16.1■□□□□ 0.17
PSEN1-225ENST00000560005 IL6RP08887 468 aaPredicted RBP16.1■□□□□ 0.17
PSEN1-225ENST00000560005 CD24P25063 80 aa16.1■□□□□ 0.17
PSEN1-225ENST00000560005 RPP30P78346 268 aaKnown RBP16.1■□□□□ 0.17
PSEN1-225ENST00000560005 BAXQ07812 192 aa16.1■□□□□ 0.17
PSEN1-225ENST00000560005 DIAPH2-AS1Q14236 149 aa16.1■□□□□ 0.17
PSEN1-225ENST00000560005 IZUMO4Q1ZYL8 232 aa16.1■□□□□ 0.17
PSEN1-225ENST00000560005 PUSL1Q8N0Z8 303 aaKnown RBP16.1■□□□□ 0.17
PSEN1-225ENST00000560005 ASCL2Q99929 193 aa16.1■□□□□ 0.17
PSEN1-225ENST00000560005 MAGT1Q9H0U3 335 aa16.1■□□□□ 0.17
PSEN1-225ENST00000560005 C11orf1Q9H5F2 150 aa16.1■□□□□ 0.17
PSEN1-225ENST00000560005 FOXA2Q9Y261 457 aaPredicted RBP16.1■□□□□ 0.17
PSEN1-225ENST00000560005 ZNF257Q9Y2Q1 563 aa16.1■□□□□ 0.17
PSEN1-225ENST00000560005 TNCP24821 2201 aa16.1■□□□□ 0.17
PSEN1-225ENST00000560005 SH2D7A6NKC9 451 aaPredicted RBP16.09■□□□□ 0.17
PSEN1-225ENST00000560005 C15orf61A6NNL5 157 aa16.09■□□□□ 0.17
PSEN1-225ENST00000560005 IFNA17P01571 189 aa16.09■□□□□ 0.17
PSEN1-225ENST00000560005 OR9G9P0C7N8 305 aa16.09■□□□□ 0.17
PSEN1-225ENST00000560005 C16orf82Q7Z2V1 217 aa16.09■□□□□ 0.17
PSEN1-225ENST00000560005 TEX45Q8NA69 505 aa16.09■□□□□ 0.17
PSEN1-225ENST00000560005 MUC7Q8TAX7 377 aa16.09■□□□□ 0.17
PSEN1-225ENST00000560005 GAR1Q9NY12 217 aaKnown RBP16.09■□□□□ 0.17
PSEN1-225ENST00000560005 ZMAT5Q9UDW3 170 aaKnown RBP16.09■□□□□ 0.17
PSEN1-225ENST00000560005 LSM4Q9Y4Z0 139 aaKnown RBP16.09■□□□□ 0.17
PSEN1-225ENST00000560005 A0A1W2PPI3 338 aa16.08■□□□□ 0.16
PSEN1-225ENST00000560005 CEBPZOSA8MTT3 80 aa16.08■□□□□ 0.16
PSEN1-225ENST00000560005 KBTBD11O94819 623 aa16.08■□□□□ 0.16
PSEN1-225ENST00000560005 IFNA7P01567 189 aa16.08■□□□□ 0.16
PSEN1-225ENST00000560005 BRS3P32247 399 aa16.08■□□□□ 0.16
PSEN1-225ENST00000560005 CAV2P51636 162 aa16.08■□□□□ 0.16
PSEN1-225ENST00000560005 HSPE1P61604 102 aaKnown RBP16.08■□□□□ 0.16
PSEN1-225ENST00000560005 ZNF767PQ75MW2 155 aa16.08■□□□□ 0.16
PSEN1-225ENST00000560005 STX12Q86Y82 276 aa16.08■□□□□ 0.16
PSEN1-225ENST00000560005 VKORC1L1Q8N0U8 176 aa16.08■□□□□ 0.16
PSEN1-225ENST00000560005 TMEM167AQ8TBQ9 72 aa16.08■□□□□ 0.16
PSEN1-225ENST00000560005 HIPK2Q9H2X6 1198 aa16.08■□□□□ 0.16
PSEN1-225ENST00000560005 RBKSQ9H477 322 aa16.08■□□□□ 0.16
PSEN1-225ENST00000560005 TMEM14BQ9NUH8 114 aa16.08■□□□□ 0.16
PSEN1-225ENST00000560005 PSENENQ9NZ42 101 aa16.08■□□□□ 0.16
PSEN1-225ENST00000560005 RGS13O14921 159 aa16.07■□□□□ 0.16
PSEN1-225ENST00000560005 SPDEFO95238 335 aa16.07■□□□□ 0.16
PSEN1-225ENST00000560005 SAA1P0DJI8 122 aaPredicted RBP16.07■□□□□ 0.16
PSEN1-225ENST00000560005 OR5B3Q8NH48 314 aa16.07■□□□□ 0.16
PSEN1-225ENST00000560005 SLC25A33Q9BSK2 321 aa16.07■□□□□ 0.16
PSEN1-225ENST00000560005 ENY2Q9NPA8 101 aa16.07■□□□□ 0.16
PSEN1-225ENST00000560005 SRRM4A7MD48 611 aaKnown RBP16.06■□□□□ 0.16
PSEN1-225ENST00000560005 MAS1LP35410 378 aa16.06■□□□□ 0.16
PSEN1-225ENST00000560005 ATP5IP56385 69 aaPredicted RBP16.06■□□□□ 0.16
PSEN1-225ENST00000560005 C18orf65Q6ZTR6 163 aa16.06■□□□□ 0.16
PSEN1-225ENST00000560005 C8orf86Q6ZUL3 223 aa16.06■□□□□ 0.16
PSEN1-225ENST00000560005 TMEM252Q8N6L7 170 aa16.06■□□□□ 0.16
PSEN1-225ENST00000560005 OR8H1Q8NGG4 311 aa16.06■□□□□ 0.16
PSEN1-225ENST00000560005 OR2T10Q8NGZ9 312 aa16.06■□□□□ 0.16
PSEN1-225ENST00000560005 DTD1Q8TEA8 209 aa16.06■□□□□ 0.16
PSEN1-225ENST00000560005 PRR25Q96S07 402 aa16.06■□□□□ 0.16
PSEN1-225ENST00000560005 QTRT1Q9BXR0 403 aaKnown RBP16.06■□□□□ 0.16
PSEN1-225ENST00000560005 BORCS7-ASMTA0A0B4J1R7 106 aa16.05■□□□□ 0.16
PSEN1-225ENST00000560005 JTBO76095 146 aa16.05■□□□□ 0.16
PSEN1-225ENST00000560005 MOSP00540 346 aa16.05■□□□□ 0.16
PSEN1-225ENST00000560005 AMY1AP04745 511 aa16.05■□□□□ 0.16
PSEN1-225ENST00000560005 RPL8P62917 257 aaKnown RBP16.05■□□□□ 0.16
PSEN1-225ENST00000560005 IFITM2Q01629 132 aa16.05■□□□□ 0.16
PSEN1-225ENST00000560005 C9orf152Q5JTZ5 239 aa16.05■□□□□ 0.16
PSEN1-225ENST00000560005 THNSL2Q86YJ6 484 aa16.05■□□□□ 0.16
PSEN1-225ENST00000560005 ZNF471Q9BX82 626 aaPredicted RBP16.05■□□□□ 0.16
PSEN1-225ENST00000560005 COMMD5Q9GZQ3 224 aa16.05■□□□□ 0.16
PSEN1-225ENST00000560005 STRAPQ9Y3F4 350 aaKnown RBP16.05■□□□□ 0.16
PSEN1-225ENST00000560005 OR51B2Q9Y5P1 312 aa16.05■□□□□ 0.16
PSEN1-225ENST00000560005 PSMB11A5LHX3 300 aa16.04■□□□□ 0.16
PSEN1-225ENST00000560005 FAM24AA6NFZ4 105 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms