RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 TEX38Q6PEX7 206 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 ZNF833PQ6ZTB9 187 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 PRSS33Q8NF86 280 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 CCL17Q92583 94 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 ZNF503Q96F45 646 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 ABHD17AQ96GS6 310 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 HARBI1Q96MB7 349 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 ELOVL5Q9NYP7 299 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 GZMBP10144 247 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 CD99P14209 185 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 SSBP2P81877 361 aaPredicted RBP8.16□□□□□ -1.1
LRRC28-216ENST00000559819 OR5I1Q13606 314 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 COA6Q5JTJ3 125 aaKnown RBP8.16□□□□□ -1.1
LRRC28-216ENST00000559819 OR10G8Q8NGN5 311 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 OR2T6Q8NHC8 308 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 ACY3Q96HD9 319 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 RIF1Q5UIP0 2472 aaKnown RBP8.16□□□□□ -1.1
LRRC28-216ENST00000559819 H0YJW9 148 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 IGHV3-48P01763 117 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 OR10J4P0C629 311 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 PDLIM4P50479 330 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 TDGF1P3P51864 188 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 CNN1P51911 297 aaKnown RBP8.16□□□□□ -1.1
LRRC28-216ENST00000559819 LCN2P80188 198 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 PRR30Q53SZ7 412 aaPredicted RBP8.16□□□□□ -1.1
LRRC28-216ENST00000559819 C10orf55Q5SWW7 151 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 ZNF714Q96N38 554 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 IMMP2LQ96T52 175 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 SAP30LQ9HAJ7 183 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 ZNF257Q9Y2Q1 563 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 PRRG2O14669 202 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 FRMD6-AS1P0C7T7 363 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 TNFRSF1AP19438 455 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 CRYBB3P26998 211 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 PRB3Q04118 309 aaPredicted RBP8.16□□□□□ -1.1
LRRC28-216ENST00000559819 JOSD1Q15040 202 aaPredicted RBP8.16□□□□□ -1.1
LRRC28-216ENST00000559819 TMEM256Q8N2U0 113 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 TXNDC17Q9BRA2 123 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 GAL3ST2Q9H3Q3 398 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 BET1LQ9NYM9 111 aa8.16□□□□□ -1.1
LRRC28-216ENST00000559819 PPIAL4EA0A075B759 164 aa8.15□□□□□ -1.1
LRRC28-216ENST00000559819 TRAV5A0A0B4J249 113 aa8.15□□□□□ -1.1
LRRC28-216ENST00000559819 PPIAL4DF5H284 164 aa8.15□□□□□ -1.1
LRRC28-216ENST00000559819 DVL1O14640 695 aa8.15□□□□□ -1.1
LRRC28-216ENST00000559819 NUPR1O60356 82 aa8.15□□□□□ -1.1
LRRC28-216ENST00000559819 OR7C2O60412 319 aa8.15□□□□□ -1.1
LRRC28-216ENST00000559819 PPIAL4FP0DN26 164 aa8.15□□□□□ -1.1
LRRC28-216ENST00000559819 ADMP35318 185 aa8.15□□□□□ -1.1
LRRC28-216ENST00000559819 GPX4P36969 197 aaPredicted RBP8.15□□□□□ -1.1
LRRC28-216ENST00000559819 FOXL1Q12952 345 aa8.15□□□□□ -1.1
LRRC28-216ENST00000559819 C2orf83Q53S99 150 aa8.15□□□□□ -1.1
LRRC28-216ENST00000559819 MORN5Q5VZ52 161 aa8.15□□□□□ -1.1
LRRC28-216ENST00000559819 Q8NA96 180 aa8.15□□□□□ -1.1
LRRC28-216ENST00000559819 CTSZQ9UBR2 303 aa8.15□□□□□ -1.1
LRRC28-216ENST00000559819 PPIAL4AQ9Y536 164 aa8.15□□□□□ -1.1
LRRC28-216ENST00000559819 ANKRD11Q6UB99 2663 aaPredicted RBP8.15□□□□□ -1.1
LRRC28-216ENST00000559819 ARFGEF3Q5TH69 2177 aa8.15□□□□□ -1.1
LRRC28-216ENST00000559819 ZNF705GA8MUZ8 300 aaPredicted RBP8.15□□□□□ -1.11
LRRC28-216ENST00000559819 MKRN2OSH3BPM6 223 aa8.15□□□□□ -1.11
LRRC28-216ENST00000559819 TMEM178BH3BS89 294 aa8.15□□□□□ -1.11
LRRC28-216ENST00000559819 MT-CO2P00403 227 aa8.15□□□□□ -1.11
LRRC28-216ENST00000559819 APOA2P02652 100 aa8.15□□□□□ -1.11
LRRC28-216ENST00000559819 CBLN1P23435 193 aa8.15□□□□□ -1.11
LRRC28-216ENST00000559819 DLX1P56177 255 aa8.15□□□□□ -1.11
LRRC28-216ENST00000559819 DEFA6Q01524 100 aa8.15□□□□□ -1.11
LRRC28-216ENST00000559819 GFRALQ6UXV0 394 aa8.15□□□□□ -1.11
LRRC28-216ENST00000559819 C11orf52Q96A22 123 aa8.15□□□□□ -1.11
LRRC28-216ENST00000559819 EAF1Q96JC9 268 aaPredicted RBP8.15□□□□□ -1.11
LRRC28-216ENST00000559819 UHRF2Q96PU4 802 aa8.15□□□□□ -1.11
LRRC28-216ENST00000559819 GVINP1Q7Z2Y8 2422 aa8.15□□□□□ -1.11
LRRC28-216ENST00000559819 GRIFINA4D1Z8 144 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 CGB1A6NKQ9 187 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 ZNF90Q03938 601 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 CENPWQ5EE01 88 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 ASPHD1Q5U4P2 390 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 OR10X1Q8NGY0 326 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 OR5R1Q8NH85 324 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 RNASEH2CQ8TDP1 164 aaKnown RBP8.14□□□□□ -1.11
LRRC28-216ENST00000559819 RITA1Q96K30 269 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 COMMD5Q9GZQ3 224 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 NDUFA4L2Q9NRX3 87 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 ATMQ13315 3056 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 GGTLC3B5MD39 225 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 FNDC10F2Z333 226 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 PKIAP61925 76 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 RPL8P62917 257 aaKnown RBP8.14□□□□□ -1.11
LRRC28-216ENST00000559819 CD69Q07108 199 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 TMEM30BQ3MIR4 351 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 OR5AN1Q8NGI8 311 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 OR1L8Q8NGR8 309 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 OR5B3Q8NH48 314 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 FLYWCH2Q96CP2 140 aaKnown RBP8.14□□□□□ -1.11
LRRC28-216ENST00000559819 C14orf144Q96I85 54 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 TPSG1Q9NRR2 321 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 TMEM106BQ9NUM4 274 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 IL36BQ9NZH7 164 aa8.14□□□□□ -1.11
LRRC28-216ENST00000559819 ZGRF1Q86YA3 2104 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 REG1AP05451 166 aa8.13□□□□□ -1.11
LRRC28-216ENST00000559819 SNRPCP09234 159 aaKnown RBP8.13□□□□□ -1.11
LRRC28-216ENST00000559819 MEF2CQ06413 473 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms