RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 RBP1P09455 135 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 ZNF728P0DKX0 622 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 HIST1H2BOP23527 126 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 MSNP26038 577 aaKnown RBP0.98□□□□□ -2.25
VPS13C-207ENST00000558919 PSMB8P28062 276 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 HIST1H2BBP33778 126 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 CCR2P41597 374 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 SERPINB9P50453 376 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 EMP1P54849 157 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 HIST1H2BDP58876 126 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 HIST1H4AP62805 103 aaKnown RBP0.98□□□□□ -2.25
VPS13C-207ENST00000558919 HIST1H2BCP62807 126 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 CCL20P78556 96 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 RPL19P84098 196 aaKnown RBP0.98□□□□□ -2.25
VPS13C-207ENST00000558919 RUNX1Q01196 453 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 RPL18Q07020 188 aaKnown RBP0.98□□□□□ -2.25
VPS13C-207ENST00000558919 HES1Q14469 280 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 HIST2H2BEQ16778 126 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 PABPC1L2AQ5JQF8 200 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.98□□□□□ -2.25
VPS13C-207ENST00000558919 C9orf64Q5T6V5 341 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 RPL22L1Q6P5R6 122 aaKnown RBP0.98□□□□□ -2.25
VPS13C-207ENST00000558919 DHRS4L2Q6PKH6 230 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 AGTRAPQ6RW13 159 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 ZNF705AQ6ZN79 300 aaPredicted RBP0.98□□□□□ -2.25
VPS13C-207ENST00000558919 Q6ZSA8 131 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 SLC36A1Q7Z2H8 476 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 SLC35E3Q7Z769 313 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 TMED4Q7Z7H5 227 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 OR52L1Q8NGH7 329 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 OR5J2Q8NH18 312 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 GNPDA2Q8TDQ7 276 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 HIST1H2BHQ93079 126 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 HIST1H2BNQ99877 126 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 HIST1H2BMQ99879 126 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 SELENOSQ9BQE4 189 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 C11orf68Q9H3H3 251 aaKnown RBP0.98□□□□□ -2.25
VPS13C-207ENST00000558919 UQCC1Q9NVA1 299 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 C14orf105Q9NVL8 296 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 ARMC1Q9NVT9 282 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 IL36BQ9NZH7 164 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 PRO2289Q9P1D8 64 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 TIMM9Q9Y5J7 89 aa0.98□□□□□ -2.25
VPS13C-207ENST00000558919 ZNF532Q9HCE3 1301 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 REREQ9P2R6 1566 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 IGLV3-9A0A075B6K5 115 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 hCG_1818297A0A087WSY0 165 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 A0A0G2JQZ4 141 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 IRGMA1A4Y4 181 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 DPRXA6NFQ7 191 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 FAM159BA6NKW6 160 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 A8MT66 165 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 FABP5P3A8MUU1 101 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 H3BT86 120 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 IFNA10P01566 189 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 C1QAP02745 245 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 MSMBP08118 114 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 TFPTP0C1Z6 253 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 SMIM10L2AP0DMW4 78 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 SMIM10L2BP0DMW5 78 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 PPIBP23284 216 aaKnown RBP0.97□□□□□ -2.25
VPS13C-207ENST00000558919 G0S2P27469 103 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 HLA-DMBP28068 263 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 ERP29P30040 261 aaKnown RBP0.97□□□□□ -2.25
VPS13C-207ENST00000558919 HINT1P49773 126 aaPredicted RBP0.97□□□□□ -2.25
VPS13C-207ENST00000558919 GNG10P50151 68 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 TPI1P60174 286 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 ZNF90Q03938 601 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 KRR1Q13601 381 aaKnown RBP0.97□□□□□ -2.25
VPS13C-207ENST00000558919 POU6F1Q14863 301 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 C12orf74Q32Q52 190 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 AADACL3Q5VUY0 350 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 FAM173BQ6P4H8 233 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 LYZL1Q6UWQ5 148 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 OR11H6Q8NGC7 330 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 OR51T1Q8NGJ9 327 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 OR13C4Q8NGS5 318 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 DCANP1Q8TF63 244 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 ANP32BQ92688 251 aaKnown RBP0.97□□□□□ -2.25
VPS13C-207ENST00000558919 TOMM6Q96B49 74 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 IMMP2LQ96T52 175 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 PRRT1Q99946 306 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 DERL1Q9BUN8 251 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 C20orf27Q9GZN8 174 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 GID8Q9NWU2 228 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 NAT8Q9UHE5 227 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 HHLA3Q9XRX5 114 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 RBM7Q9Y580 266 aaKnown RBP0.97□□□□□ -2.25
VPS13C-207ENST00000558919 TIMM22Q9Y584 194 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 V9GYQ6 96 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 MALRD1Q5VYJ5 2156 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 GREB1Q4ZG55 1949 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 RTEL1-TNFRSF6BF6WH68 1400 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 PIK3C2GO75747 1445 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 NUMA1Q14980 2115 aa0.97□□□□□ -2.25
VPS13C-207ENST00000558919 RTL1A6NKG5 1358 aa0.96□□□□□ -2.26
VPS13C-207ENST00000558919 TRAV38-1A0A0B4J264 116 aa0.96□□□□□ -2.26
VPS13C-207ENST00000558919 TRAV41A0A0B4J266 112 aa0.96□□□□□ -2.26
VPS13C-207ENST00000558919 TMEM238C9JI98 176 aa0.96□□□□□ -2.26
VPS13C-207ENST00000558919 SLC22A1O15245 554 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms