RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 C20orf85Q9H1P6 137 aa11.98□□□□□ -0.49
LINC01220-201ENST00000558575 SHPKQ9UHJ6 478 aa11.98□□□□□ -0.49
LINC01220-201ENST00000558575 TRAV6A0A075B6T7 132 aa11.97□□□□□ -0.49
LINC01220-201ENST00000558575 FAM240BA0A1B0GVZ2 78 aa11.97□□□□□ -0.49
LINC01220-201ENST00000558575 NUDT19A8MXV4 375 aa11.97□□□□□ -0.49
LINC01220-201ENST00000558575 MFAP2P55001 183 aa11.97□□□□□ -0.49
LINC01220-201ENST00000558575 RHOGP84095 191 aa11.97□□□□□ -0.49
LINC01220-201ENST00000558575 PRCDQ00LT1 54 aa11.97□□□□□ -0.49
LINC01220-201ENST00000558575 RUNX1Q01196 453 aa11.97□□□□□ -0.49
LINC01220-201ENST00000558575 DHRS2Q13268 280 aa11.97□□□□□ -0.49
LINC01220-201ENST00000558575 SPINK9Q5DT21 86 aa11.97□□□□□ -0.49
LINC01220-201ENST00000558575 MZT2BQ6NZ67 158 aa11.97□□□□□ -0.49
LINC01220-201ENST00000558575 LYG2Q86SG7 212 aa11.97□□□□□ -0.49
LINC01220-201ENST00000558575 CACNG5Q9UF02 275 aa11.97□□□□□ -0.49
LINC01220-201ENST00000558575 IGLV11-55A0A075B6I3 123 aa11.96□□□□□ -0.49
LINC01220-201ENST00000558575 CCL24O00175 119 aa11.96□□□□□ -0.49
LINC01220-201ENST00000558575 OR2J3O76001 311 aa11.96□□□□□ -0.49
LINC01220-201ENST00000558575 NDUFB8O95169 186 aa11.96□□□□□ -0.49
LINC01220-201ENST00000558575 MECP2P51608 486 aaKnown RBP11.96□□□□□ -0.49
LINC01220-201ENST00000558575 SRPXP78539 464 aa11.96□□□□□ -0.49
LINC01220-201ENST00000558575 THOC7Q6I9Y2 204 aaKnown RBP11.96□□□□□ -0.49
LINC01220-201ENST00000558575 NRARPQ7Z6K4 114 aa11.96□□□□□ -0.49
LINC01220-201ENST00000558575 DUSP18Q8NEJ0 188 aa11.96□□□□□ -0.49
LINC01220-201ENST00000558575 WFDC9Q8NEX5 89 aa11.96□□□□□ -0.49
LINC01220-201ENST00000558575 OR52B4Q8NGK2 314 aa11.96□□□□□ -0.49
LINC01220-201ENST00000558575 RNASE11Q8TAA1 199 aaKnown RBP11.96□□□□□ -0.49
LINC01220-201ENST00000558575 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.96□□□□□ -0.49
LINC01220-201ENST00000558575 NUDT15Q9NV35 164 aa11.96□□□□□ -0.49
LINC01220-201ENST00000558575 DNAH1Q9P2D7 4330 aa11.95□□□□□ -0.5
LINC01220-201ENST00000558575 HLA-AP01891 365 aaKnown RBP11.95□□□□□ -0.5
LINC01220-201ENST00000558575 LGALS1P09382 135 aaKnown RBP11.95□□□□□ -0.5
LINC01220-201ENST00000558575 H2AFB2P0C5Z0 115 aa11.95□□□□□ -0.5
LINC01220-201ENST00000558575 MYCNOSP40205 109 aa11.95□□□□□ -0.5
LINC01220-201ENST00000558575 MRPL41Q8IXM3 137 aaKnown RBP11.95□□□□□ -0.5
LINC01220-201ENST00000558575 OR2C3Q8N628 320 aa11.95□□□□□ -0.5
LINC01220-201ENST00000558575 WI2-2373I1.2A0A1W2PRP0 233 aa11.94□□□□□ -0.5
LINC01220-201ENST00000558575 PITX3O75364 302 aa11.94□□□□□ -0.5
LINC01220-201ENST00000558575 DUS4LO95620 317 aaKnown RBP11.94□□□□□ -0.5
LINC01220-201ENST00000558575 RAB25P57735 213 aa11.94□□□□□ -0.5
LINC01220-201ENST00000558575 FHL3Q13643 280 aa11.94□□□□□ -0.5
LINC01220-201ENST00000558575 C4orf46Q504U0 113 aa11.94□□□□□ -0.5
LINC01220-201ENST00000558575 DEFB121Q5J5C9 76 aa11.94□□□□□ -0.5
LINC01220-201ENST00000558575 ZNF343Q6P1L6 599 aa11.94□□□□□ -0.5
LINC01220-201ENST00000558575 HSD17B13Q7Z5P4 300 aaPredicted RBP11.94□□□□□ -0.5
LINC01220-201ENST00000558575 LINC00482Q8N8I6 264 aa11.94□□□□□ -0.5
LINC01220-201ENST00000558575 NECAP1Q8NC96 275 aa11.94□□□□□ -0.5
LINC01220-201ENST00000558575 OR11H1Q8NG94 326 aa11.94□□□□□ -0.5
LINC01220-201ENST00000558575 OR1N2Q8NGR9 330 aa11.94□□□□□ -0.5
LINC01220-201ENST00000558575 OR52E5Q8NH55 327 aa11.94□□□□□ -0.5
LINC01220-201ENST00000558575 USMG5Q96IX5 58 aa11.94□□□□□ -0.5
LINC01220-201ENST00000558575 FBXL7Q9UJT9 491 aa11.94□□□□□ -0.5
LINC01220-201ENST00000558575 F11RQ9Y624 299 aaKnown RBP11.94□□□□□ -0.5
LINC01220-201ENST00000558575 IGHV4OR15-8A0A075B7B6 117 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 A0A087WW49 117 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 A0A0G2JLM5 398 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 C13orf42A0A1B0GVH6 325 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 DUXBA0A1W2PPF3 345 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 FAM223BA6NKX1 122 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 INS-IGF2F8WCM5 200 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 ADAP1O75689 374 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 IFNA17P01571 189 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 TRBV12-3P01733 135 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 HOXB5P09067 269 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 SULT1A3P0DMM9 295 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 SULT1A4P0DMN0 295 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 SPNP16150 400 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 SPCS3P61009 180 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 ATP5G2Q06055 141 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 CD69Q07108 199 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 GGNBP1Q5YKI7 109 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 FAM223AQ8IWN6 122 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 MITD1Q8WV92 249 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 SEC22CQ9BRL7 303 aa11.93□□□□□ -0.5
LINC01220-201ENST00000558575 GAR1Q9NY12 217 aaKnown RBP11.93□□□□□ -0.5
LINC01220-201ENST00000558575 A0A1B0GU03 582 aa11.92□□□□□ -0.5
LINC01220-201ENST00000558575 MPTX1A8MV57 137 aa11.92□□□□□ -0.5
LINC01220-201ENST00000558575 NXPH3O95157 252 aa11.92□□□□□ -0.5
LINC01220-201ENST00000558575 DEFA4P12838 97 aa11.92□□□□□ -0.5
LINC01220-201ENST00000558575 IGLL1P15814 213 aa11.92□□□□□ -0.5
LINC01220-201ENST00000558575 SMCO1Q147U7 214 aa11.92□□□□□ -0.5
LINC01220-201ENST00000558575 C15orf32Q32M92 178 aa11.92□□□□□ -0.5
LINC01220-201ENST00000558575 SLC25A24Q6NUK1 477 aa11.92□□□□□ -0.5
LINC01220-201ENST00000558575 ENKURQ8TC29 256 aa11.92□□□□□ -0.5
LINC01220-201ENST00000558575 B9D2Q9BPU9 175 aa11.92□□□□□ -0.5
LINC01220-201ENST00000558575 PLEKHA3Q9HB20 300 aa11.92□□□□□ -0.5
LINC01220-201ENST00000558575 TMED3Q9Y3Q3 217 aa11.92□□□□□ -0.5
LINC01220-201ENST00000558575 S4R3C0 116 aa11.92□□□□□ -0.5
LINC01220-201ENST00000558575 ANKRD34BA5PLL1 514 aa11.91□□□□□ -0.5
LINC01220-201ENST00000558575 MFSD2BA6NFX1 497 aa11.91□□□□□ -0.5
LINC01220-201ENST00000558575 DHFRP00374 187 aa11.91□□□□□ -0.5
LINC01220-201ENST00000558575 PF4P02776 101 aa11.91□□□□□ -0.5
LINC01220-201ENST00000558575 HSPB1P04792 205 aaKnown RBP11.91□□□□□ -0.5
LINC01220-201ENST00000558575 SLC25A6P12236 298 aa11.91□□□□□ -0.5
LINC01220-201ENST00000558575 HIST1H1BP16401 226 aaKnown RBP11.91□□□□□ -0.5
LINC01220-201ENST00000558575 ZNF616Q08AN1 781 aa11.91□□□□□ -0.5
LINC01220-201ENST00000558575 PVRIGQ6DKI7 326 aa11.91□□□□□ -0.5
LINC01220-201ENST00000558575 ZNF114Q8NC26 417 aa11.91□□□□□ -0.5
LINC01220-201ENST00000558575 OR1P1Q8NH06 330 aa11.91□□□□□ -0.5
LINC01220-201ENST00000558575 HSPB7Q9UBY9 170 aa11.91□□□□□ -0.5
LINC01220-201ENST00000558575 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms