RNA–Protein interactions for RNA: ENST00000558528.1

LDLR-209, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 456 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-209ENST00000558528 MGAM2Q2M2H8 2515 aa4.12□□□□□ -1.75
LDLR-209ENST00000558528 SONP18583 2426 aaKnown RBP4.11□□□□□ -1.75
LDLR-209ENST00000558528 IGHV2-70DA0A0C4DH43 119 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 A0A0D9SG52 128 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 A0A1W2PPI3 338 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 B4DSR2 109 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 M0R1X1 148 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 TFF1P04155 84 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 SLC25A4P12235 298 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 NQO2P16083 231 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 CCL3L1P16619 93 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 OMGP23515 440 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 HTR1DP28221 377 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 LPAR6P43657 344 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 LGALS7P47929 136 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 AKR1C2P52895 323 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 ELLP55199 621 aaPredicted RBP4.11□□□□□ -1.75
LDLR-209ENST00000558528 DLX6P56179 175 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 LMO4P61968 165 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 EIF5AP63241 154 aaKnown RBP4.11□□□□□ -1.75
LDLR-209ENST00000558528 IAH1Q2TAA2 248 aaPredicted RBP4.11□□□□□ -1.75
LDLR-209ENST00000558528 SP6Q3SY56 376 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 C11orf87Q6NUJ2 197 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 TCF23Q7RTU1 214 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 H2BFWTQ7Z2G1 175 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 PDPNQ86YL7 162 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 TGIF2LXQ8IUE1 241 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 IQCF2Q8IXL9 164 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 SELENOHQ8IZQ5 122 aaKnown RBP4.11□□□□□ -1.75
LDLR-209ENST00000558528 SPAG16Q8N0X2 631 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 FGFRL1Q8N441 504 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 COMMD1Q8N668 190 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 INO80EQ8NBZ0 244 aaPredicted RBP4.11□□□□□ -1.75
LDLR-209ENST00000558528 ZNF439Q8NDP4 499 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 OR11H6Q8NGC7 330 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 OR4A5Q8NH83 315 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 CLDND2Q8NHS1 167 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 RPEQ96AT9 228 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 FLYWCH2Q96CP2 140 aaKnown RBP4.11□□□□□ -1.75
LDLR-209ENST00000558528 RBM14Q96PK6 669 aaKnown RBP4.11□□□□□ -1.75
LDLR-209ENST00000558528 TP53RKQ96S44 253 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 KRTAP17-1Q9BYP8 105 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 CHIAQ9BZP6 476 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.11□□□□□ -1.75
LDLR-209ENST00000558528 HIF1ANQ9NWT6 349 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 COA4Q9NYJ1 87 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 TECRQ9NZ01 308 aaKnown RBP4.11□□□□□ -1.75
LDLR-209ENST00000558528 GSKIPQ9P0R6 139 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 DPM3Q9P2X0 92 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 ONECUT1Q9UBC0 465 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 MMP24Q9Y5R2 645 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 INSIG2Q9Y5U4 225 aa4.11□□□□□ -1.75
LDLR-209ENST00000558528 PRKDCP78527 4128 aaKnown RBP4.1□□□□□ -1.75
LDLR-209ENST00000558528 MYO7BQ6PIF6 2116 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 AKAP6Q13023 2319 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 IGHV2-26A0A0B4J1V2 119 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 IGLV5-39A0A0G2JS06 123 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 A0A1B0GW55 424 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 J3QLI3 93 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 CCL24O00175 119 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 TAAR5O14804 337 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 PAX4O43316 350 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 TNFSF12O43508 249 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 LY6HO94772 140 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 OR2F2O95006 317 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 IGLV2-14P01704 120 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 DUX4L2P0CJ85 424 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 DUX4L3P0CJ86 424 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 DUX4L4P0CJ87 422 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 DUX4L5P0CJ88 424 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 DUX4L6P0CJ89 424 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 DUX4L7P0CJ90 424 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 CXCL3P19876 107 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 GNG10P50151 68 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 UBE2E1P51965 193 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 AP2S1P53680 142 aaPredicted RBP4.1□□□□□ -1.75
LDLR-209ENST00000558528 DVL1P1P54792 670 aaPredicted RBP4.1□□□□□ -1.75
LDLR-209ENST00000558528 TAS2R30P59541 319 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 ARF6P62330 175 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 LOXL1Q08397 574 aaPredicted RBP4.1□□□□□ -1.75
LDLR-209ENST00000558528 ZNF816Q0VGE8 651 aaPredicted RBP4.1□□□□□ -1.75
LDLR-209ENST00000558528 PJVKQ0ZLH3 352 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 EIF4EBP1Q13541 118 aaPredicted RBP4.1□□□□□ -1.75
LDLR-209ENST00000558528 OR2F1Q13607 317 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 ZNF124Q15973 351 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 HLA-DRB5Q30154 266 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 GPR157Q5UAW9 335 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 PRSS54Q6PEW0 395 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 DUX4L9Q6RFH8 374 aaPredicted RBP4.1□□□□□ -1.75
LDLR-209ENST00000558528 ZNF833PQ6ZTB9 187 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 LYZL2Q7Z4W2 148 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 ZNF546Q86UE3 836 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 TMEM219Q86XT9 240 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 FAM71E2Q8N5Q1 922 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 SLC35G3Q8N808 338 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 DMBX1Q8NFW5 382 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 OR4C13Q8NGP0 309 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 OR1S1Q8NH92 325 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 UBALD1Q8TB05 177 aa4.1□□□□□ -1.75
LDLR-209ENST00000558528 PPP1R1CQ8WVI7 109 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms