RNA–Protein interactions for RNA: ENST00000557657.5

TMEM260-216, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-216ENST00000557657 PRNDQ9UKY0 176 aa17.24■□□□□ 0.35
TMEM260-216ENST00000557657 PPIAL4EA0A075B759 164 aa17.23■□□□□ 0.35
TMEM260-216ENST00000557657 PPIAL4DF5H284 164 aa17.23■□□□□ 0.35
TMEM260-216ENST00000557657 VENTXO95231 258 aa17.23■□□□□ 0.35
TMEM260-216ENST00000557657 LY86O95711 162 aa17.23■□□□□ 0.35
TMEM260-216ENST00000557657 PPIAL4FP0DN26 164 aa17.23■□□□□ 0.35
TMEM260-216ENST00000557657 PRR20EP86478 221 aa17.23■□□□□ 0.35
TMEM260-216ENST00000557657 PRR20CP86479 221 aa17.23■□□□□ 0.35
TMEM260-216ENST00000557657 PRR20DP86480 221 aa17.23■□□□□ 0.35
TMEM260-216ENST00000557657 PRR20BP86481 221 aa17.23■□□□□ 0.35
TMEM260-216ENST00000557657 PRR20AP86496 221 aa17.23■□□□□ 0.35
TMEM260-216ENST00000557657 ANAPC16Q96DE5 110 aa17.23■□□□□ 0.35
TMEM260-216ENST00000557657 RITA1Q96K30 269 aa17.23■□□□□ 0.35
TMEM260-216ENST00000557657 PPIAL4AQ9Y536 164 aa17.23■□□□□ 0.35
TMEM260-216ENST00000557657 IL3RAP26951 378 aa17.23■□□□□ 0.35
TMEM260-216ENST00000557657 SSBP2P81877 361 aaPredicted RBP17.23■□□□□ 0.35
TMEM260-216ENST00000557657 GAMTQ14353 236 aa17.23■□□□□ 0.35
TMEM260-216ENST00000557657 ZNF833PQ6ZTB9 187 aa17.23■□□□□ 0.35
TMEM260-216ENST00000557657 A0A1B0GUS0 222 aa17.22■□□□□ 0.35
TMEM260-216ENST00000557657 H0YJW9 148 aa17.22■□□□□ 0.35
TMEM260-216ENST00000557657 OR10J1P30954 320 aa17.22■□□□□ 0.35
TMEM260-216ENST00000557657 OR2T6Q8NHC8 308 aa17.22■□□□□ 0.35
TMEM260-216ENST00000557657 PACRGQ96M98 296 aaPredicted RBP17.22■□□□□ 0.35
TMEM260-216ENST00000557657 ABCA1O95477 2261 aa17.22■□□□□ 0.35
TMEM260-216ENST00000557657 XKRY2A2RUG3 117 aa17.22■□□□□ 0.35
TMEM260-216ENST00000557657 LYNX1G3V0Z9 82 aa17.22■□□□□ 0.35
TMEM260-216ENST00000557657 LYNX1P0DP58 116 aa17.22■□□□□ 0.35
TMEM260-216ENST00000557657 RPL29P47914 159 aaKnown RBP17.22■□□□□ 0.35
TMEM260-216ENST00000557657 TMEM249Q2WGJ8 235 aa17.22■□□□□ 0.35
TMEM260-216ENST00000557657 HLA-DRB5Q30154 266 aa17.22■□□□□ 0.35
TMEM260-216ENST00000557657 ASCL5Q7RTU5 278 aa17.22■□□□□ 0.35
TMEM260-216ENST00000557657 TMEM106BQ9NUM4 274 aa17.22■□□□□ 0.35
TMEM260-216ENST00000557657 ELOA3CA0A087WX78 387 aaPredicted RBP17.21■□□□□ 0.35
TMEM260-216ENST00000557657 IGHV3-72A0A0B4J1Y9 119 aa17.21■□□□□ 0.35
TMEM260-216ENST00000557657 DVL1O14640 695 aa17.21■□□□□ 0.35
TMEM260-216ENST00000557657 GGCTO75223 188 aaKnown RBP17.21■□□□□ 0.35
TMEM260-216ENST00000557657 OR10J4P0C629 311 aa17.21■□□□□ 0.35
TMEM260-216ENST00000557657 RHOBP62745 196 aa17.21■□□□□ 0.35
TMEM260-216ENST00000557657 SPACA3Q8IXA5 215 aa17.21■□□□□ 0.35
TMEM260-216ENST00000557657 NABP2Q9BQ15 211 aa17.21■□□□□ 0.35
TMEM260-216ENST00000557657 GAL3ST2Q9H3Q3 398 aa17.21■□□□□ 0.35
TMEM260-216ENST00000557657 SLC45A2Q9UMX9 530 aa17.21■□□□□ 0.35
TMEM260-216ENST00000557657 K7EN84 100 aa17.21■□□□□ 0.35
TMEM260-216ENST00000557657 SNRPCP09234 159 aaKnown RBP17.21■□□□□ 0.35
TMEM260-216ENST00000557657 FAM87AP0C7U9 286 aa17.21■□□□□ 0.35
TMEM260-216ENST00000557657 RNASE2P10153 161 aaKnown RBP17.21■□□□□ 0.35
TMEM260-216ENST00000557657 TPSG1Q9NRR2 321 aa17.21■□□□□ 0.35
TMEM260-216ENST00000557657 ZNF320A2RRD8 509 aa17.2■□□□□ 0.34
TMEM260-216ENST00000557657 E7EQL1 145 aa17.2■□□□□ 0.34
TMEM260-216ENST00000557657 F6UZH7 168 aa17.2■□□□□ 0.34
TMEM260-216ENST00000557657 SLC17A3O00476 420 aa17.2■□□□□ 0.34
TMEM260-216ENST00000557657 PSG5Q15238 335 aa17.2■□□□□ 0.34
TMEM260-216ENST00000557657 OR10X1Q8NGY0 326 aa17.2■□□□□ 0.34
TMEM260-216ENST00000557657 ZNF503Q96F45 646 aa17.2■□□□□ 0.34
TMEM260-216ENST00000557657 SFRP2Q96HF1 295 aa17.2■□□□□ 0.34
TMEM260-216ENST00000557657 ELOVL5Q9NYP7 299 aa17.2■□□□□ 0.34
TMEM260-216ENST00000557657 PITPNC1Q9UKF7 332 aa17.2■□□□□ 0.34
TMEM260-216ENST00000557657 PLAUP00749 431 aa17.2■□□□□ 0.34
TMEM260-216ENST00000557657 ASPHD1Q5U4P2 390 aa17.2■□□□□ 0.34
TMEM260-216ENST00000557657 MORN5Q5VZ52 161 aa17.2■□□□□ 0.34
TMEM260-216ENST00000557657 SGMS2Q8NHU3 365 aa17.2■□□□□ 0.34
TMEM260-216ENST00000557657 RNASE6Q93091 150 aaKnown RBP17.2■□□□□ 0.34
TMEM260-216ENST00000557657 ACY3Q96HD9 319 aa17.2■□□□□ 0.34
TMEM260-216ENST00000557657 NBL1P41271 181 aa17.19■□□□□ 0.34
TMEM260-216ENST00000557657 RAB31Q13636 194 aa17.19■□□□□ 0.34
TMEM260-216ENST00000557657 JKAMPQ9P055 326 aa17.19■□□□□ 0.34
TMEM260-216ENST00000557657 MALRD1Q5VYJ5 2156 aa17.19■□□□□ 0.34
TMEM260-216ENST00000557657 SHISA9B4DS77 424 aa17.19■□□□□ 0.34
TMEM260-216ENST00000557657 REG1AP05451 166 aa17.19■□□□□ 0.34
TMEM260-216ENST00000557657 APELAP0DMC3 54 aa17.19■□□□□ 0.34
TMEM260-216ENST00000557657 NUBP1P53384 320 aa17.19■□□□□ 0.34
TMEM260-216ENST00000557657 OR5I1Q13606 314 aa17.19■□□□□ 0.34
TMEM260-216ENST00000557657 TBR1Q16650 682 aa17.19■□□□□ 0.34
TMEM260-216ENST00000557657 C19orf35Q6ZS72 473 aa17.19■□□□□ 0.34
TMEM260-216ENST00000557657 DMRTC2Q8IXT2 367 aaPredicted RBP17.19■□□□□ 0.34
TMEM260-216ENST00000557657 OR1P1Q8NH06 330 aa17.19■□□□□ 0.34
TMEM260-216ENST00000557657 ZNF257Q9Y2Q1 563 aa17.19■□□□□ 0.34
TMEM260-216ENST00000557657 TGOLN2O43493 480 aa17.18■□□□□ 0.34
TMEM260-216ENST00000557657 AMBPP02760 352 aa17.18■□□□□ 0.34
TMEM260-216ENST00000557657 FRMD6-AS1P0C7T7 363 aa17.18■□□□□ 0.34
TMEM260-216ENST00000557657 ACTL10Q5JWF8 245 aa17.18■□□□□ 0.34
TMEM260-216ENST00000557657 TMEM183AQ8IXX5 376 aa17.18■□□□□ 0.34
TMEM260-216ENST00000557657 PRDM13Q9H4Q3 707 aa17.18■□□□□ 0.34
TMEM260-216ENST00000557657 DYNLRB1Q9NP97 96 aa17.18■□□□□ 0.34
TMEM260-216ENST00000557657 BET1LQ9NYM9 111 aa17.18■□□□□ 0.34
TMEM260-216ENST00000557657 TRAV5A0A0B4J249 113 aa17.18■□□□□ 0.34
TMEM260-216ENST00000557657 CGB1A6NKQ9 187 aa17.18■□□□□ 0.34
TMEM260-216ENST00000557657 LOXP28300 417 aaPredicted RBP17.18■□□□□ 0.34
TMEM260-216ENST00000557657 SRP14P37108 136 aaKnown RBP17.18■□□□□ 0.34
TMEM260-216ENST00000557657 LGALS4P56470 323 aa17.18■□□□□ 0.34
TMEM260-216ENST00000557657 TMEM144Q7Z5S9 345 aa17.18■□□□□ 0.34
TMEM260-216ENST00000557657 COMMD5Q9GZQ3 224 aa17.18■□□□□ 0.34
TMEM260-216ENST00000557657 NDUFB3O43676 98 aa17.17■□□□□ 0.34
TMEM260-216ENST00000557657 APOA2P02652 100 aa17.17■□□□□ 0.34
TMEM260-216ENST00000557657 OR5AN1Q8NGI8 311 aa17.17■□□□□ 0.34
TMEM260-216ENST00000557657 FLYWCH2Q96CP2 140 aaKnown RBP17.17■□□□□ 0.34
TMEM260-216ENST00000557657 OR7C2O60412 319 aa17.17■□□□□ 0.34
TMEM260-216ENST00000557657 RPL8P62917 257 aaKnown RBP17.17■□□□□ 0.34
TMEM260-216ENST00000557657 WT1-ASQ06250 92 aa17.17■□□□□ 0.34
TMEM260-216ENST00000557657 RUSC1-AS1Q66K80 236 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms