RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 IBA57Q5T440 356 aaKnown RBP1.95□□□□□ -2.1
TRAV28-201ENST00000557548 SBSNQ6UWP8 590 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 Q6ZRU5 148 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 ZNF283Q8N7M2 679 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 LY6G5BQ8NDX9 201 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 OR2M3Q8NG83 312 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 OR5A1Q8NGJ0 315 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 OR13C4Q8NGS5 318 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 OR2T4Q8NH00 348 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 C2orf15Q8WU43 125 aaKnown RBP1.95□□□□□ -2.1
TRAV28-201ENST00000557548 THEM6Q8WUY1 208 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 FRZBQ92765 325 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 PLEKHB2Q96CS7 222 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 TSPAN32Q96QS1 320 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 THTPAQ9BU02 230 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 PBOV1Q9GZY1 135 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 MED11Q9P086 117 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 LINC00527Q9UJ94 153 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 PXMP4Q9Y6I8 212 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 CHD5Q8TDI0 1954 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 DOCK8Q8NF50 2099 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 ABCC12Q96J65 1359 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 MED23Q9ULK4 1368 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 RGPD3A6NKT7 1758 aaPredicted RBP1.95□□□□□ -2.1
TRAV28-201ENST00000557548 RGPD4Q7Z3J3 1758 aa1.95□□□□□ -2.1
TRAV28-201ENST00000557548 ADGRL2O95490 1459 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 CACNA1SQ13698 1873 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 RGS12O14924 1447 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 DAPK1P53355 1430 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 ARHGAP31Q2M1Z3 1444 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 MYOM3Q5VTT5 1437 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 FGD6Q6ZV73 1430 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 VPS8Q8N3P4 1428 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 MYOM1P52179 1685 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 hCG_1818297A0A087WSY0 165 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 A0A087WX48 190 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 FAM92AA1XBS5 289 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 C9orf170A2RU37 121 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 OR4C45A6NMZ5 311 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 RIIAD1A6NNX1 92 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 A8MT66 165 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 TMEM250H0YL14 139 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 OR7C2O60412 319 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 CDS2O95674 445 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 IFNA7P01567 189 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 IFNA4P05014 189 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 CTSEP14091 401 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 ZNF25P17030 456 aaPredicted RBP1.94□□□□□ -2.1
TRAV28-201ENST00000557548 NTF3P20783 257 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 CCL1P22362 96 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 S100A2P29034 98 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 OR10J1P30954 320 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 G6PCP35575 357 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 PPP1CCP36873 323 aaKnown RBP1.94□□□□□ -2.1
TRAV28-201ENST00000557548 NOVP48745 357 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 INPP1P49441 399 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 ZNF83P51522 516 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 ZNF140P52738 457 aaPredicted RBP1.94□□□□□ -2.1
TRAV28-201ENST00000557548 KLF3P57682 345 aaPredicted RBP1.94□□□□□ -2.1
TRAV28-201ENST00000557548 ZNF816Q0VGE8 651 aaPredicted RBP1.94□□□□□ -2.1
TRAV28-201ENST00000557548 HTR4Q13639 388 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 GRK1Q15835 563 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 C12orf74Q32Q52 190 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 TCF23Q7RTU1 214 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 CROCCP2Q86T23 111 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 MIR7-3HGQ8N6C7 128 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 ZNF615Q8N8J6 731 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 TMEM105Q8N8V8 129 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 GPR119Q8TDV5 335 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 ITLN2Q8WWU7 325 aaPredicted RBP1.94□□□□□ -2.1
TRAV28-201ENST00000557548 OR5P3Q8WZ94 311 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 APOBEC3DQ96AK3 386 aaPredicted RBP1.94□□□□□ -2.1
TRAV28-201ENST00000557548 PDCD10Q9BUL8 212 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 C20orf27Q9GZN8 174 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 TMEM222Q9H0R3 208 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 LINC00574Q9H8X3 128 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 DHCR7Q9UBM7 475 aaKnown RBP1.94□□□□□ -2.1
TRAV28-201ENST00000557548 LAMTOR3Q9UHA4 124 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 GNG8Q9UK08 70 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 KLK12Q9UKR0 248 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 ANAPC10Q9UM13 185 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 HEY1Q9Y5J3 304 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 SBF1O95248 1867 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 LY75O60449 1722 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 KIAA1551Q9HCM1 1747 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 PARP4Q9UKK3 1724 aaKnown RBP1.94□□□□□ -2.1
TRAV28-201ENST00000557548 DYSFO75923 2080 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 NUP214P35658 2090 aaPredicted RBP1.94□□□□□ -2.1
TRAV28-201ENST00000557548 BTAF1O14981 1849 aa1.94□□□□□ -2.1
TRAV28-201ENST00000557548 MIA3Q5JRA6 1907 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 KIF1AQ12756 1690 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 LMO7Q8WWI1 1683 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 DOCK5Q9H7D0 1870 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 LRRC37A3O60309 1634 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 IGHV1-69-2A0A0G2JMI3 117 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 PVALEFA0A1B0GWK0 134 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 C7orf66A4D0T2 115 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 B4DEV8 164 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 ISLRO14498 428 aa1.93□□□□□ -2.1
TRAV28-201ENST00000557548 MRASO14807 208 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms