RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 H3BMQ9 156 aa12.5□□□□□ -0.41
VSX1-207ENST00000557285 TPPPO94811 219 aa12.5□□□□□ -0.41
VSX1-207ENST00000557285 CD74P04233 296 aa12.5□□□□□ -0.41
VSX1-207ENST00000557285 AKR1C2P52895 323 aa12.5□□□□□ -0.41
VSX1-207ENST00000557285 RND3P61587 244 aa12.5□□□□□ -0.41
VSX1-207ENST00000557285 Q56UQ5 140 aa12.5□□□□□ -0.41
VSX1-207ENST00000557285 UXS1Q8NBZ7 420 aa12.5□□□□□ -0.41
VSX1-207ENST00000557285 OR2K2Q8NGT1 345 aa12.5□□□□□ -0.41
VSX1-207ENST00000557285 TERB2Q8NHR7 220 aa12.5□□□□□ -0.41
VSX1-207ENST00000557285 ZFAND1Q8TCF1 268 aa12.5□□□□□ -0.41
VSX1-207ENST00000557285 VN1R17PQ8TDU5 208 aa12.5□□□□□ -0.41
VSX1-207ENST00000557285 ISOC1Q96CN7 298 aa12.5□□□□□ -0.41
VSX1-207ENST00000557285 ZNF486Q96H40 463 aaPredicted RBP12.5□□□□□ -0.41
VSX1-207ENST00000557285 NEURL2Q9BR09 285 aa12.5□□□□□ -0.41
VSX1-207ENST00000557285 WFDC10AQ9H1F0 79 aa12.5□□□□□ -0.41
VSX1-207ENST00000557285 C3orf85A0A1B0GTC6 90 aa12.49□□□□□ -0.41
VSX1-207ENST00000557285 TGOLN2O43493 480 aa12.49□□□□□ -0.41
VSX1-207ENST00000557285 SCAF4O95104 1147 aaKnown RBP12.49□□□□□ -0.41
VSX1-207ENST00000557285 IGKV1-5P01602 117 aa12.49□□□□□ -0.41
VSX1-207ENST00000557285 CD7P09564 240 aa12.49□□□□□ -0.41
VSX1-207ENST00000557285 ZNF57Q68EA5 555 aaPredicted RBP12.49□□□□□ -0.41
VSX1-207ENST00000557285 BTNL8Q6UX41 500 aa12.49□□□□□ -0.41
VSX1-207ENST00000557285 CCDC71LQ8N9Z2 235 aa12.49□□□□□ -0.41
VSX1-207ENST00000557285 RNASE11Q8TAA1 199 aaKnown RBP12.49□□□□□ -0.41
VSX1-207ENST00000557285 SCARB1Q8WTV0 552 aa12.49□□□□□ -0.41
VSX1-207ENST00000557285 SMIM4Q8WVI0 70 aa12.49□□□□□ -0.41
VSX1-207ENST00000557285 C19orf73Q9NVV2 129 aa12.49□□□□□ -0.41
VSX1-207ENST00000557285 SLC2A8Q9NY64 477 aa12.49□□□□□ -0.41
VSX1-207ENST00000557285 C21orf62Q9NYP8 219 aa12.49□□□□□ -0.41
VSX1-207ENST00000557285 MLXQ9UH92 298 aa12.49□□□□□ -0.41
VSX1-207ENST00000557285 TENM3Q9P273 2699 aa12.49□□□□□ -0.41
VSX1-207ENST00000557285 STAB2Q8WWQ8 2551 aa12.48□□□□□ -0.41
VSX1-207ENST00000557285 CCDC160A6NGH7 325 aa12.48□□□□□ -0.41
VSX1-207ENST00000557285 ZNF785A8K8V0 405 aa12.48□□□□□ -0.41
VSX1-207ENST00000557285 IGHV3-48P01763 117 aa12.48□□□□□ -0.41
VSX1-207ENST00000557285 MRPS10P82664 201 aaKnown RBP12.48□□□□□ -0.41
VSX1-207ENST00000557285 PRCDQ00LT1 54 aa12.48□□□□□ -0.41
VSX1-207ENST00000557285 MEF2DQ14814 521 aa12.48□□□□□ -0.41
VSX1-207ENST00000557285 TMEM61Q8N0U2 210 aa12.48□□□□□ -0.41
VSX1-207ENST00000557285 CADM3Q8N126 398 aa12.48□□□□□ -0.41
VSX1-207ENST00000557285 BCL7BQ9BQE9 202 aa12.48□□□□□ -0.41
VSX1-207ENST00000557285 C20orf24Q9BUV8 137 aa12.48□□□□□ -0.41
VSX1-207ENST00000557285 PALMDQ9NP74 551 aa12.48□□□□□ -0.41
VSX1-207ENST00000557285 TECRQ9NZ01 308 aaKnown RBP12.48□□□□□ -0.41
VSX1-207ENST00000557285 C14orf166Q9Y224 244 aaKnown RBP12.48□□□□□ -0.41
VSX1-207ENST00000557285 TEX13DA0A0J9YY54 714 aaPredicted RBP12.47□□□□□ -0.41
VSX1-207ENST00000557285 A8MWP6 167 aa12.47□□□□□ -0.41
VSX1-207ENST00000557285 DISC1C4P0D8 188 aa12.47□□□□□ -0.41
VSX1-207ENST00000557285 K7EIM0 57 aa12.47□□□□□ -0.41
VSX1-207ENST00000557285 ZNF207O43670 478 aaKnown RBP12.47□□□□□ -0.41
VSX1-207ENST00000557285 OR2C3Q8N628 320 aa12.47□□□□□ -0.41
VSX1-207ENST00000557285 DEFB125Q8N687 156 aa12.47□□□□□ -0.41
VSX1-207ENST00000557285 OR4C16Q8NGL9 310 aa12.47□□□□□ -0.41
VSX1-207ENST00000557285 MCFD2Q8NI22 146 aa12.47□□□□□ -0.41
VSX1-207ENST00000557285 PINX1Q96BK5 328 aaKnown RBP12.47□□□□□ -0.41
VSX1-207ENST00000557285 BSCL2Q96G97 398 aaPredicted RBP12.47□□□□□ -0.41
VSX1-207ENST00000557285 CHRDL1Q9BU40 450 aa12.47□□□□□ -0.41
VSX1-207ENST00000557285 SLIRPQ9GZT3 109 aaKnown RBP12.47□□□□□ -0.41
VSX1-207ENST00000557285 UFC1Q9Y3C8 167 aa12.47□□□□□ -0.41
VSX1-207ENST00000557285 IFNA17P01571 189 aa12.46□□□□□ -0.41
VSX1-207ENST00000557285 CTSDP07339 412 aaPredicted RBP12.46□□□□□ -0.41
VSX1-207ENST00000557285 AKAIN1P0CW23 69 aa12.46□□□□□ -0.41
VSX1-207ENST00000557285 HSPE1P61604 102 aaKnown RBP12.46□□□□□ -0.41
VSX1-207ENST00000557285 SSBP1Q04837 148 aaKnown RBP12.46□□□□□ -0.41
VSX1-207ENST00000557285 HAGHQ16775 308 aa12.46□□□□□ -0.41
VSX1-207ENST00000557285 SLC35G3Q8N808 338 aa12.46□□□□□ -0.41
VSX1-207ENST00000557285 OR1L6Q8NGR2 347 aa12.46□□□□□ -0.41
VSX1-207ENST00000557285 OR1P1Q8NH06 330 aa12.46□□□□□ -0.41
VSX1-207ENST00000557285 TM2D3Q9BRN9 247 aa12.46□□□□□ -0.41
VSX1-207ENST00000557285 ZNF436Q9C0F3 470 aaPredicted RBP12.46□□□□□ -0.41
VSX1-207ENST00000557285 A0A0B4J293 547 aa12.45□□□□□ -0.42
VSX1-207ENST00000557285 A8MZ25 164 aa12.45□□□□□ -0.42
VSX1-207ENST00000557285 OR11H12B2RN74 326 aa12.45□□□□□ -0.42
VSX1-207ENST00000557285 F8W735 103 aaPredicted RBP12.45□□□□□ -0.42
VSX1-207ENST00000557285 CTDSPLO15194 276 aa12.45□□□□□ -0.42
VSX1-207ENST00000557285 ST8SIA3O43173 380 aa12.45□□□□□ -0.42
VSX1-207ENST00000557285 ATG12O94817 140 aa12.45□□□□□ -0.42
VSX1-207ENST00000557285 OR5AC1P0C628 307 aa12.45□□□□□ -0.42
VSX1-207ENST00000557285 ERHP84090 104 aaKnown RBP12.45□□□□□ -0.42
VSX1-207ENST00000557285 OR51S1Q8NGJ8 323 aa12.45□□□□□ -0.42
VSX1-207ENST00000557285 TMEM190Q8WZ59 177 aa12.45□□□□□ -0.42
VSX1-207ENST00000557285 RRNAD1Q96FB5 475 aaKnown RBP12.45□□□□□ -0.42
VSX1-207ENST00000557285 RTBDNQ9BSG5 229 aaPredicted RBP12.45□□□□□ -0.42
VSX1-207ENST00000557285 PDCD10Q9BUL8 212 aa12.45□□□□□ -0.42
VSX1-207ENST00000557285 SRD5A3Q9H8P0 318 aa12.45□□□□□ -0.42
VSX1-207ENST00000557285 RETNQ9HD89 108 aa12.45□□□□□ -0.42
VSX1-207ENST00000557285 MCUBQ9NWR8 336 aa12.45□□□□□ -0.42
VSX1-207ENST00000557285 KMT2CQ8NEZ4 4911 aaKnown RBP12.45□□□□□ -0.42
VSX1-207ENST00000557285 A0A0G2JRQ6 117 aa12.44□□□□□ -0.42
VSX1-207ENST00000557285 FABP12A6NFH5 140 aa12.44□□□□□ -0.42
VSX1-207ENST00000557285 MT-CO2P00403 227 aa12.44□□□□□ -0.42
VSX1-207ENST00000557285 TNFSF8P32971 234 aa12.44□□□□□ -0.42
VSX1-207ENST00000557285 ETV6P41212 452 aa12.44□□□□□ -0.42
VSX1-207ENST00000557285 HOXA1P49639 335 aaPredicted RBP12.44□□□□□ -0.42
VSX1-207ENST00000557285 SPSB3Q6PJ21 355 aa12.44□□□□□ -0.42
VSX1-207ENST00000557285 RBPMS2Q6ZRY4 209 aaKnown RBP12.44□□□□□ -0.42
VSX1-207ENST00000557285 OR52B4Q8NGK2 314 aa12.44□□□□□ -0.42
VSX1-207ENST00000557285 NAA60Q9H7X0 242 aa12.44□□□□□ -0.42
VSX1-207ENST00000557285 RSL24D1Q9UHA3 163 aaKnown RBP12.44□□□□□ -0.42
VSX1-207ENST00000557285 CEPT1Q9Y6K0 416 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms