RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 MLNRO43193 412 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 DUSP14O95147 198 aaKnown RBP7.56□□□□□ -1.2
SYNE3-205ENST00000557275 HLA-DQB1P01920 261 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 PIEZO1Q92508 2521 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 MOSP00540 346 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 SPINK8P0C7L1 97 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 TSPAN7P41732 249 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 FXYD3Q14802 87 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 TMEM54Q969K7 222 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 IGHV1-69-2A0A0G2JMI3 117 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 GFERP55789 205 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 RUNX1Q01196 453 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 TMEM155Q4W5P6 130 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 LOC285556D6RIA3 1793 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 ARID2Q68CP9 1835 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 MRAPQ8TCY5 172 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 MARF1Q9Y4F3 1742 aaKnown RBP7.56□□□□□ -1.2
SYNE3-205ENST00000557275 OCIAD2Q56VL3 154 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 LILRA3Q8N6C8 439 aaPredicted RBP7.56□□□□□ -1.2
SYNE3-205ENST00000557275 IGLV3-25P01717 112 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 NKG7Q16617 165 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 TMEM170AQ8WVE7 144 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 OR5P3Q8WZ94 311 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 C1QL4Q86Z23 238 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 NRN1Q9NPD7 142 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 SLURP2P0DP57 97 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 GUSBP11Q6P575 273 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 PLXND1Q9Y4D7 1925 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 H3BQ85 93 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 CD69Q07108 199 aa7.56□□□□□ -1.2
SYNE3-205ENST00000557275 FABP5P3A8MUU1 101 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 SOCS3O14543 225 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 FAM90A1Q86YD7 464 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 DENND4AQ7Z401 1863 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 HCFC1P51610 2035 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 AGRNO00468 2067 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 ZP4Q12836 540 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 TCF19Q9Y242 345 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 FAM90A9PA6NNJ1 464 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 CEACAM5P06731 702 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 IFITM1P13164 125 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 ANAPC10Q9UM13 185 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 CD28P10747 220 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 EGR2P11161 476 aaPredicted RBP7.55□□□□□ -1.2
SYNE3-205ENST00000557275 CXCL2P19875 107 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 KLK13Q9UKR3 277 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 CGB1A6NKQ9 187 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 UBE2CO00762 179 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 SLC25A53Q5H9E4 307 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 IQCF6A8MYZ5 107 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 F12P00748 615 aaPredicted RBP7.55□□□□□ -1.2
SYNE3-205ENST00000557275 DEFB103AP81534 67 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 C1orf210Q8IVY1 113 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 OSTCQ9NRP0 149 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 CALYQ9NYX4 217 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 IRF3Q14653 427 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 RTN4RL2Q86UN3 420 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 GTSCR1Q86UQ5 136 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 FAM166AQ6J272 317 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 RASL10BQ96S79 203 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 EFNB1P98172 346 aa7.55□□□□□ -1.2
SYNE3-205ENST00000557275 RCC1LQ96I51 464 aaKnown RBP7.55□□□□□ -1.2
SYNE3-205ENST00000557275 AHRRA9YTQ3 701 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 LIFP15018 202 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 FOXC1Q12948 553 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 LRP10Q7Z4F1 713 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 PVRIGQ6DKI7 326 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 Q6ZNB5 142 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 OTORQ9NRC9 128 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 TMEM229AB2RXF0 380 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 TMEM167AQ8TBQ9 72 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 PTPRFP10586 1907 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 SAA1P0DJI8 122 aaPredicted RBP7.54□□□□□ -1.2
SYNE3-205ENST00000557275 SPATA25Q9BR10 227 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 IDI2-AS1Q9NZ38 188 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 APELAP0DMC3 54 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 H0Y8X5 98 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 IGHV3-13P01766 116 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 IGHV3-7P01780 117 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 CCL7P80098 99 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 PRADC1Q9BSG0 188 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 TCRBV5S1A1TA0A578 114 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 ZNRF1Q8ND25 227 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 SBF2Q86WG5 1849 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 GAGE12BA1L429 117 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 A8MXK9 166 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 PLA2G10O15496 165 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 LILRA1O75019 489 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 ZNF79Q15937 498 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 PGLYRP1O75594 196 aaPredicted RBP7.54□□□□□ -1.2
SYNE3-205ENST00000557275 UNC119Q13432 240 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 KLF17Q5JT82 389 aaPredicted RBP7.54□□□□□ -1.2
SYNE3-205ENST00000557275 NEUROG3Q9Y4Z2 214 aa7.54□□□□□ -1.2
SYNE3-205ENST00000557275 CDC42EP2O14613 210 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 TCTEX1D4Q5JR98 221 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 GATD1Q8NB37 220 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 ATXN7O15265 892 aaPredicted RBP7.53□□□□□ -1.2
SYNE3-205ENST00000557275 OR2H2O95918 312 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 METTL12A8MUP2 240 aa7.53□□□□□ -1.2
SYNE3-205ENST00000557275 F8W1H4 67 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms