RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 FAM53AQ6NSI3 398 aaPredicted RBP14.36□□□□□ -0.11
PTPN21-208ENST00000556564 RPUSD1Q9UJJ7 312 aaKnown RBP14.36□□□□□ -0.11
PTPN21-208ENST00000556564 TMEM177Q53S58 311 aa14.36□□□□□ -0.11
PTPN21-208ENST00000556564 TOMM20LQ6UXN7 152 aa14.36□□□□□ -0.11
PTPN21-208ENST00000556564 Q6ZN92 141 aa14.36□□□□□ -0.11
PTPN21-208ENST00000556564 FUT9Q9Y231 359 aa14.36□□□□□ -0.11
PTPN21-208ENST00000556564 IGKV1D-8A0A087WSZ0 117 aa14.36□□□□□ -0.11
PTPN21-208ENST00000556564 EFNB1P98172 346 aa14.36□□□□□ -0.11
PTPN21-208ENST00000556564 TEX45Q8NA69 505 aa14.36□□□□□ -0.11
PTPN21-208ENST00000556564 ARID1AO14497 2285 aa14.36□□□□□ -0.11
PTPN21-208ENST00000556564 TRAV20A0A0B4J274 112 aa14.36□□□□□ -0.11
PTPN21-208ENST00000556564 TPRP12270 2363 aaKnown RBP14.36□□□□□ -0.11
PTPN21-208ENST00000556564 PSMB11A5LHX3 300 aa14.35□□□□□ -0.11
PTPN21-208ENST00000556564 Q5BKY6 102 aa14.35□□□□□ -0.11
PTPN21-208ENST00000556564 DOCK9Q9BZ29 2069 aa14.35□□□□□ -0.11
PTPN21-208ENST00000556564 TEX50A0A1B0GTY4 177 aa14.35□□□□□ -0.11
PTPN21-208ENST00000556564 ATP5IP56385 69 aaPredicted RBP14.35□□□□□ -0.11
PTPN21-208ENST00000556564 FAM159AQ6UWV7 190 aa14.35□□□□□ -0.11
PTPN21-208ENST00000556564 COL4A4P53420 1690 aaPredicted RBP14.35□□□□□ -0.11
PTPN21-208ENST00000556564 C15orf61A6NNL5 157 aa14.35□□□□□ -0.11
PTPN21-208ENST00000556564 MFAP2P55001 183 aa14.35□□□□□ -0.11
PTPN21-208ENST00000556564 AMMECR1LQ6DCA0 310 aa14.35□□□□□ -0.11
PTPN21-208ENST00000556564 EP400Q96L91 3159 aa14.35□□□□□ -0.11
PTPN21-208ENST00000556564 SNCGO76070 127 aa14.35□□□□□ -0.11
PTPN21-208ENST00000556564 CLDND2Q8NHS1 167 aa14.35□□□□□ -0.11
PTPN21-208ENST00000556564 IGHV1-3A0A0C4DH29 117 aa14.35□□□□□ -0.11
PTPN21-208ENST00000556564 C7orf77A4D0Y5 90 aa14.35□□□□□ -0.11
PTPN21-208ENST00000556564 GCHFRP30047 84 aa14.35□□□□□ -0.11
PTPN21-208ENST00000556564 RNF144BQ7Z419 303 aa14.35□□□□□ -0.11
PTPN21-208ENST00000556564 OR9G9P0C7N8 305 aa14.34□□□□□ -0.11
PTPN21-208ENST00000556564 C19orf24Q9BVV8 132 aa14.34□□□□□ -0.11
PTPN21-208ENST00000556564 TRAV41A0A0B4J266 112 aa14.34□□□□□ -0.11
PTPN21-208ENST00000556564 A8MWL6 223 aa14.34□□□□□ -0.11
PTPN21-208ENST00000556564 DUTP33316 252 aaKnown RBP14.34□□□□□ -0.11
PTPN21-208ENST00000556564 RUSC1-AS1Q66K80 236 aa14.34□□□□□ -0.11
PTPN21-208ENST00000556564 RNASEH2CQ8TDP1 164 aaKnown RBP14.34□□□□□ -0.11
PTPN21-208ENST00000556564 HLA-DRB1P01911 266 aa14.34□□□□□ -0.11
PTPN21-208ENST00000556564 MEF2BQ02080 365 aaPredicted RBP14.34□□□□□ -0.11
PTPN21-208ENST00000556564 FAM89BQ8N5H3 189 aa14.34□□□□□ -0.11
PTPN21-208ENST00000556564 OR8A1Q8NGG7 326 aa14.34□□□□□ -0.11
PTPN21-208ENST00000556564 TNFRSF14Q92956 283 aa14.34□□□□□ -0.11
PTPN21-208ENST00000556564 C5orf24Q7Z6I8 188 aa14.34□□□□□ -0.11
PTPN21-208ENST00000556564 MYOZ3Q8TDC0 251 aa14.34□□□□□ -0.11
PTPN21-208ENST00000556564 MED12Q93074 2177 aa14.34□□□□□ -0.11
PTPN21-208ENST00000556564 IGKV1D-17A0A075B6S4 117 aa14.34□□□□□ -0.11
PTPN21-208ENST00000556564 C9JCJ5 164 aa14.34□□□□□ -0.11
PTPN21-208ENST00000556564 AP4M1O00189 453 aa14.34□□□□□ -0.11
PTPN21-208ENST00000556564 CEACAM8P31997 349 aaPredicted RBP14.34□□□□□ -0.11
PTPN21-208ENST00000556564 SDHCQ99643 169 aaPredicted RBP14.34□□□□□ -0.11
PTPN21-208ENST00000556564 VAMP8Q9BV40 100 aa14.34□□□□□ -0.11
PTPN21-208ENST00000556564 C11orf91Q3C1V1 193 aa14.33□□□□□ -0.11
PTPN21-208ENST00000556564 LDLRAD2Q5SZI1 272 aa14.33□□□□□ -0.11
PTPN21-208ENST00000556564 CBLN2Q8IUK8 224 aa14.33□□□□□ -0.11
PTPN21-208ENST00000556564 FAM169BQ8N8A8 192 aa14.33□□□□□ -0.11
PTPN21-208ENST00000556564 DUX3Q96PT4 197 aa14.33□□□□□ -0.11
PTPN21-208ENST00000556564 ALPK2Q86TB3 2170 aa14.33□□□□□ -0.12
PTPN21-208ENST00000556564 TRAV34A0A0B4J273 112 aa14.33□□□□□ -0.12
PTPN21-208ENST00000556564 FHITP49789 147 aa14.33□□□□□ -0.12
PTPN21-208ENST00000556564 GLMPQ8WWB7 406 aa14.33□□□□□ -0.12
PTPN21-208ENST00000556564 HTN3P15516 51 aa14.33□□□□□ -0.12
PTPN21-208ENST00000556564 ZNF56Q15929 161 aa14.33□□□□□ -0.12
PTPN21-208ENST00000556564 C18orf12Q96KH6 178 aa14.33□□□□□ -0.12
PTPN21-208ENST00000556564 HEPN1Q6WQI6 88 aa14.33□□□□□ -0.12
PTPN21-208ENST00000556564 FAM215AQ9Y5M1 114 aa14.33□□□□□ -0.12
PTPN21-208ENST00000556564 ZNF660Q6AZW8 331 aaPredicted RBP14.33□□□□□ -0.12
PTPN21-208ENST00000556564 OR10W1Q8NGF6 305 aa14.33□□□□□ -0.12
PTPN21-208ENST00000556564 PRO3102Q9H379 93 aa14.33□□□□□ -0.12
PTPN21-208ENST00000556564 CRXO43186 299 aaPredicted RBP14.32□□□□□ -0.12
PTPN21-208ENST00000556564 VOPP1Q96AW1 172 aa14.32□□□□□ -0.12
PTPN21-208ENST00000556564 M0R1W7 72 aa14.32□□□□□ -0.12
PTPN21-208ENST00000556564 RNASE4P34096 147 aaKnown RBP14.32□□□□□ -0.12
PTPN21-208ENST00000556564 SGMS2Q8NHU3 365 aa14.32□□□□□ -0.12
PTPN21-208ENST00000556564 FREM3P0C091 2139 aa14.32□□□□□ -0.12
PTPN21-208ENST00000556564 STHQ8IWL8 128 aa14.32□□□□□ -0.12
PTPN21-208ENST00000556564 GATAD1Q8WUU5 269 aa14.32□□□□□ -0.12
PTPN21-208ENST00000556564 GALNT14Q96FL9 552 aa14.32□□□□□ -0.12
PTPN21-208ENST00000556564 ADAMTS9Q9P2N4 1935 aa14.32□□□□□ -0.12
PTPN21-208ENST00000556564 CACNA1BQ00975 2339 aa14.32□□□□□ -0.12
PTPN21-208ENST00000556564 BTF3P20290 206 aaKnown RBP14.32□□□□□ -0.12
PTPN21-208ENST00000556564 COL4A3Q01955 1670 aa14.31□□□□□ -0.12
PTPN21-208ENST00000556564 CGAP01215 116 aa14.31□□□□□ -0.12
PTPN21-208ENST00000556564 MDKP21741 143 aaPredicted RBP14.31□□□□□ -0.12
PTPN21-208ENST00000556564 C2orf68Q2NKX9 166 aa14.31□□□□□ -0.12
PTPN21-208ENST00000556564 ZNF585BQ52M93 769 aa14.31□□□□□ -0.12
PTPN21-208ENST00000556564 FOXL2NBQ6ZUU3 175 aa14.31□□□□□ -0.12
PTPN21-208ENST00000556564 OR10D4PQ8NGN7 298 aa14.31□□□□□ -0.12
PTPN21-208ENST00000556564 LINC01587Q99440 93 aa14.31□□□□□ -0.12
PTPN21-208ENST00000556564 CD99P14209 185 aa14.31□□□□□ -0.12
PTPN21-208ENST00000556564 FBLN5Q9UBX5 448 aa14.31□□□□□ -0.12
PTPN21-208ENST00000556564 LEMD1Q68G75 181 aa14.31□□□□□ -0.12
PTPN21-208ENST00000556564 MINOS1Q5TGZ0 78 aa14.3□□□□□ -0.12
PTPN21-208ENST00000556564 ZNF581Q9P0T4 197 aa14.3□□□□□ -0.12
PTPN21-208ENST00000556564 MINOS1-NBL1R4GNA1 71 aa14.3□□□□□ -0.12
PTPN21-208ENST00000556564 IGKV3OR2-268A0A0C4DH90 116 aa14.3□□□□□ -0.12
PTPN21-208ENST00000556564 NBEAP1P0C6P0 100 aa14.3□□□□□ -0.12
PTPN21-208ENST00000556564 KIF26BQ2KJY2 2108 aa14.3□□□□□ -0.12
PTPN21-208ENST00000556564 MAP1LC3CQ9BXW4 147 aa14.3□□□□□ -0.12
PTPN21-208ENST00000556564 TRAV14DV4A0A0A6YYC5 116 aa14.3□□□□□ -0.12
PTPN21-208ENST00000556564 BUB1B-PAK6H3BSN5 160 aa14.3□□□□□ -0.12
PTPN21-208ENST00000556564 NDUFS8O00217 210 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms