RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 PNKDQ8N490 385 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 NECAP1Q8NC96 275 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 OR5AN1Q8NGI8 311 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 OR2T10Q8NGZ9 312 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 OR4A5Q8NH83 315 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 TMEM167AQ8TBQ9 72 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 IMMP2LQ96T52 175 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 MDFIQ99750 246 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 TMEM204Q9BSN7 226 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 DERL1Q9BUN8 251 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 HINT2Q9BX68 163 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 GPR61Q9BZJ8 451 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 SAP30LQ9HAJ7 183 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 NGBQ9NPG2 151 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 TMEM106BQ9NUM4 274 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 ZNRD1Q9P1U0 126 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 PITPNC1Q9UKF7 332 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 FUT9Q9Y231 359 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 PPIAL4AQ9Y536 164 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 LY96Q9Y6Y9 160 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 RP1L1Q8IWN7 2480 aaPredicted RBP4.39□□□□□ -1.71
GPHN-213ENST00000556501 CACNA1AO00555 2505 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 APC2O95996 2303 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 ACACAQ13085 2346 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 PRRC2CQ9Y520 2896 aaKnown RBP4.38□□□□□ -1.71
GPHN-213ENST00000556501 TRBV20OR9-2A0A075B6H5 130 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 TRAV9-1A0A075B6T8 112 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 A0A087X0M5 115 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 MDFIC2A0A1B0GVS7 189 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 A0A1B0GX30 115 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 A0A1W2PPQ1 181 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 VSTM5A8MXK1 200 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 SHISA9B4DS77 424 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 C9JCJ5 164 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 DLL1O00548 723 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 NDUFB3O43676 98 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 IGHV2-70P01814 119 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 OR5G3P0C626 314 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 C1QTNF9P0C862 333 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 CCL3L1P16619 93 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 USF1P22415 310 aaPredicted RBP4.38□□□□□ -1.71
GPHN-213ENST00000556501 IL3RAP26951 378 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 LOXP28300 417 aaPredicted RBP4.38□□□□□ -1.71
GPHN-213ENST00000556501 CHRNA7P36544 502 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 RPL8P62917 257 aaKnown RBP4.38□□□□□ -1.71
GPHN-213ENST00000556501 CD69Q07108 199 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 SSX2Q16385 188 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 TBR1Q16650 682 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 TMEM155Q4W5P6 130 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 LRRC10Q5BKY1 277 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 TMEM200BQ69YZ2 307 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 ASCL5Q7RTU5 278 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 PDPNQ86YL7 162 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 SPACA3Q8IXA5 215 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 DMRTC2Q8IXT2 367 aaPredicted RBP4.38□□□□□ -1.71
GPHN-213ENST00000556501 ZNF114Q8NC26 417 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 OR10D4PQ8NGN7 298 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 OR1P1Q8NH06 330 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 RND1Q92730 232 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 RNASE6Q93091 150 aaKnown RBP4.38□□□□□ -1.71
GPHN-213ENST00000556501 ST6GALNAC6Q969X2 333 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 ACY3Q96HD9 319 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 SFRP2Q96HF1 295 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 HARBI1Q96MB7 349 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 UHRF2Q96PU4 802 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 HIST1H2BLQ99880 126 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 NABP2Q9BQ15 211 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 PCGF1Q9BSM1 259 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 C19orf24Q9BVV8 132 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 MRPL32Q9BYC8 188 aaKnown RBP4.38□□□□□ -1.71
GPHN-213ENST00000556501 SEPSECSQ9HD40 501 aaKnown RBP4.38□□□□□ -1.71
GPHN-213ENST00000556501 NDUFA4L2Q9NRX3 87 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 TMEM167BQ9NRX6 74 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 KAAG1Q9UBP8 84 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 CTSZQ9UBR2 303 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 MIOXQ9UGB7 285 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 DMRT1Q9Y5R6 373 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 IGF2RP11717 2491 aa4.38□□□□□ -1.71
GPHN-213ENST00000556501 YLPM1P49750 1951 aaKnown RBP4.38□□□□□ -1.71
GPHN-213ENST00000556501 ZGRF1Q86YA3 2104 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 TNCP24821 2201 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 IGKV1OR2-108A0A075B7D4 117 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 A0A1W2PN81 502 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 E7EQL1 145 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 K7ENP7 123 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 IGLV2-23P01705 113 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 FABP4P15090 132 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 CHRNB4P30926 498 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 OR10J1P30954 320 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 GPX4P36969 197 aaPredicted RBP4.37□□□□□ -1.71
GPHN-213ENST00000556501 PDLIM4P50479 330 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 TAS2R45P59539 299 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 RPL15P61313 204 aaKnown RBP4.37□□□□□ -1.71
GPHN-213ENST00000556501 RBPJQ06330 500 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 FOXL1Q12952 345 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 GAMTQ14353 236 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 PRR30Q53SZ7 412 aaPredicted RBP4.37□□□□□ -1.71
GPHN-213ENST00000556501 PDZD11Q5EBL8 140 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 FAM78BQ5VT40 261 aa4.37□□□□□ -1.71
GPHN-213ENST00000556501 TEX38Q6PEX7 206 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms