RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ACSF3Q4G176 576 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 A0A1W2PRD5 423 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 A0A1W2PRF3 423 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 A0A1W2PRM7 423 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 FOXI3A8MTJ6 420 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 A8MWP6 167 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 TNFSF13O75888 250 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 MORN2Q502X0 79 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 LINC00305Q7Z4B0 112 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 SNRNP40Q96DI7 357 aaKnown RBP12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 IZUMO1RA6ND01 250 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 PFN1P07737 140 aaKnown RBP12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 GPR6P46095 362 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 OR4C13Q8NGP0 309 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 NEU1Q99519 415 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 GGTLC1Q9BX51 225 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 ELOVL5Q9NYP7 299 aa12.54□□□□□ -0.4
ARHGEF40-207ENST00000556399 PEX7O00628 323 aa12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 RBFOX2O43251 390 aaKnown RBP eCLIP12.53□□□□□ -0.45e-12■■■□□ 17.9
ARHGEF40-207ENST00000556399 MOSP00540 346 aa12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 S100A4P26447 101 aaKnown RBP12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 GFRA1P56159 465 aa12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 C15orf61A6NNL5 157 aa12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 HLA-DRB1P01911 266 aa12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 NMUP48645 174 aa12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 ZNF585BQ52M93 769 aa12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 TMEM144Q7Z5S9 345 aa12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 SCNM1Q9BWG6 230 aa12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 GNB1LQ9BYB4 327 aa12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 GAGE10A6NGK3 116 aa12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 IGLV3-1P01715 115 aa12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 TFPI2P48307 235 aa12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 ZFP36L1Q07352 338 aaKnown RBP12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 Q6P435 159 aa12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 ST6GALNAC6Q969X2 333 aa12.53□□□□□ -0.4
ARHGEF40-207ENST00000556399 YPEL1O60688 119 aa12.52□□□□□ -0.4
ARHGEF40-207ENST00000556399 ZNF324O75467 553 aaPredicted RBP12.52□□□□□ -0.4
ARHGEF40-207ENST00000556399 ZNF726P1Q15940 193 aa12.52□□□□□ -0.4
ARHGEF40-207ENST00000556399 YPEL2Q96QA6 119 aa12.52□□□□□ -0.4
ARHGEF40-207ENST00000556399 ICE1Q9Y2F5 2266 aa12.52□□□□□ -0.4
ARHGEF40-207ENST00000556399 CEACAM3P40198 252 aa12.52□□□□□ -0.4
ARHGEF40-207ENST00000556399 MMDQ15546 238 aa12.52□□□□□ -0.4
ARHGEF40-207ENST00000556399 SRSF12Q8WXF0 261 aaKnown RBP12.52□□□□□ -0.4
ARHGEF40-207ENST00000556399 PRDM13Q9H4Q3 707 aa12.52□□□□□ -0.4
ARHGEF40-207ENST00000556399 OSTCQ9NRP0 149 aa12.52□□□□□ -0.4
ARHGEF40-207ENST00000556399 KBTBD11-OT1A0A1B0GTJ5 212 aa12.52□□□□□ -0.41
ARHGEF40-207ENST00000556399 CD33P20138 364 aa12.52□□□□□ -0.41
ARHGEF40-207ENST00000556399 FOXF2Q12947 444 aa12.52□□□□□ -0.41
ARHGEF40-207ENST00000556399 C16orf97H3BN30 126 aa12.52□□□□□ -0.41
ARHGEF40-207ENST00000556399 EREGO14944 169 aa12.52□□□□□ -0.41
ARHGEF40-207ENST00000556399 KHDC1LQ5JSQ8 128 aa12.52□□□□□ -0.41
ARHGEF40-207ENST00000556399 MRPL37Q9BZE1 423 aaKnown RBP12.52□□□□□ -0.41
ARHGEF40-207ENST00000556399 CHODLQ9H9P2 273 aa12.52□□□□□ -0.41
ARHGEF40-207ENST00000556399 OR4C46A6NHA9 309 aa12.51□□□□□ -0.41
ARHGEF40-207ENST00000556399 PEAR1Q5VY43 1037 aaPredicted RBP12.51□□□□□ -0.41
ARHGEF40-207ENST00000556399 SAA2-SAA4A0A096LPE2 208 aa12.51□□□□□ -0.41
ARHGEF40-207ENST00000556399 IGHV2OR16-5A0A0B4J2B6 119 aa12.51□□□□□ -0.41
ARHGEF40-207ENST00000556399 PPIHO43447 177 aaKnown RBP12.51□□□□□ -0.41
ARHGEF40-207ENST00000556399 SAA2P0DJI9 122 aaPredicted RBP12.51□□□□□ -0.41
ARHGEF40-207ENST00000556399 SPATA31B1PQ5VZV4 182 aa12.51□□□□□ -0.41
ARHGEF40-207ENST00000556399 UFC1Q9Y3C8 167 aa12.51□□□□□ -0.41
ARHGEF40-207ENST00000556399 SPTA1P02549 2419 aa12.51□□□□□ -0.41
ARHGEF40-207ENST00000556399 CEP250Q9BV73 2442 aa12.51□□□□□ -0.41
ARHGEF40-207ENST00000556399 NPIPB11E5RHQ5 1161 aa12.51□□□□□ -0.41
ARHGEF40-207ENST00000556399 TMEM30BQ3MIR4 351 aa12.51□□□□□ -0.41
ARHGEF40-207ENST00000556399 TMEM116Q8NCL8 245 aa12.51□□□□□ -0.41
ARHGEF40-207ENST00000556399 TMEM189A5PLL7 270 aa12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 TICRRQ7Z2Z1 1910 aa12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 Q0VFX4 171 aa12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 C1orf185Q5T7R7 199 aa12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 CDPF1Q6NVV7 123 aa12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 OSR1Q8TAX0 266 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 RNASEH2CQ8TDP1 164 aaKnown RBP12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 MGST2Q99735 147 aa12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 FAM90A9PA6NNJ1 464 aa12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 HIGD1CA8MV81 97 aa12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 OR10J3Q5JRS4 329 aa12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 GOLT1AQ6ZVE7 132 aa12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 ST6GALNAC3Q8NDV1 305 aa12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 SEPSECSQ9HD40 501 aaKnown RBP12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 LIPFP07098 398 aa12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 NBEAP1P0C6P0 100 aa12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 FAM216BQ8N7L0 139 aa12.5□□□□□ -0.41
ARHGEF40-207ENST00000556399 NTN3O00634 580 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF40-207ENST00000556399 LINC00205P59089 165 aa12.49□□□□□ -0.41
ARHGEF40-207ENST00000556399 HOXA4Q00056 320 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF40-207ENST00000556399 SSBP4Q9BWG4 385 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF40-207ENST00000556399 ANOS1P23352 680 aa12.49□□□□□ -0.41
ARHGEF40-207ENST00000556399 DIRC2Q96SL1 478 aa12.49□□□□□ -0.41
ARHGEF40-207ENST00000556399 SPAARA0A1B0GVQ0 90 aa12.49□□□□□ -0.41
ARHGEF40-207ENST00000556399 LINC00473A8K010 186 aa12.49□□□□□ -0.41
ARHGEF40-207ENST00000556399 CA1P00915 261 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF40-207ENST00000556399 MUC15Q8N387 334 aa12.49□□□□□ -0.41
ARHGEF40-207ENST00000556399 OR10AG1Q8NH19 301 aa12.49□□□□□ -0.41
ARHGEF40-207ENST00000556399 OR52E5Q8NH55 327 aa12.49□□□□□ -0.41
ARHGEF40-207ENST00000556399 SHANK1Q9Y566 2161 aa12.49□□□□□ -0.41
ARHGEF40-207ENST00000556399 DLEU1O43261 78 aa12.49□□□□□ -0.41
ARHGEF40-207ENST00000556399 TWIST1Q15672 202 aa12.49□□□□□ -0.41
ARHGEF40-207ENST00000556399 RAB1CQ92928 201 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms