RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 IL6RP08887 468 aaPredicted RBP12.27□□□□□ -0.45
NEK9-209ENST00000556170 FOLR2P14207 255 aa12.27□□□□□ -0.45
NEK9-209ENST00000556170 ARSJQ5FYB0 599 aaPredicted RBP12.27□□□□□ -0.45
NEK9-209ENST00000556170 CDPF1Q6NVV7 123 aa12.27□□□□□ -0.45
NEK9-209ENST00000556170 EXPH5Q8NEV8 1989 aa12.27□□□□□ -0.45
NEK9-209ENST00000556170 MBD3L1Q8WWY6 194 aa12.27□□□□□ -0.45
NEK9-209ENST00000556170 NBEAQ8NFP9 2946 aa12.27□□□□□ -0.45
NEK9-209ENST00000556170 MBD3L4A6NDZ8 208 aaPredicted RBP12.27□□□□□ -0.45
NEK9-209ENST00000556170 MBD3L3A6NE82 208 aaPredicted RBP12.27□□□□□ -0.45
NEK9-209ENST00000556170 MBD3L5A6NJ08 208 aaPredicted RBP12.27□□□□□ -0.45
NEK9-209ENST00000556170 CGAP01215 116 aa12.27□□□□□ -0.45
NEK9-209ENST00000556170 CRYBB3P26998 211 aa12.27□□□□□ -0.45
NEK9-209ENST00000556170 MLANAQ16655 118 aa12.27□□□□□ -0.45
NEK9-209ENST00000556170 C10orf55Q5SWW7 151 aa12.27□□□□□ -0.45
NEK9-209ENST00000556170 MBD3L2Q8NHZ7 208 aaPredicted RBP12.27□□□□□ -0.45
NEK9-209ENST00000556170 NAT8BQ9UHF3 227 aa12.27□□□□□ -0.45
NEK9-209ENST00000556170 HELTA6NFD8 242 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 C17orf100A8MU93 164 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 RANP62826 216 aaKnown RBP12.26□□□□□ -0.45
NEK9-209ENST00000556170 PRR30Q53SZ7 412 aaPredicted RBP12.26□□□□□ -0.45
NEK9-209ENST00000556170 MRPL54Q6P161 138 aaKnown RBP12.26□□□□□ -0.45
NEK9-209ENST00000556170 CYP2G1PQ6ZSU1 146 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 C2orf88Q9BSF0 95 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 TECRQ9NZ01 308 aaKnown RBP12.26□□□□□ -0.45
NEK9-209ENST00000556170 FAM215AQ9Y5M1 114 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 SCO2A0A1W2PP80 73 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 LMO1P25800 156 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 DLX1P56177 255 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 DOLPP1Q86YN1 238 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 PRR7Q8TB68 274 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 HIST1H2BKO60814 126 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 MPDU1O75352 247 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 HIST1H2BJP06899 126 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 C1QTNF9P0C862 333 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 PRB4P10163 310 aaPredicted RBP12.26□□□□□ -0.45
NEK9-209ENST00000556170 HIST1H2BOP23527 126 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 HIST1H2BBP33778 126 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 IER3P46695 156 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 HIST1H2BDP58876 126 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 HIST1H2BCP62807 126 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 FXYD3Q14802 87 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 HIST2H2BEQ16778 126 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.26□□□□□ -0.45
NEK9-209ENST00000556170 Q6ZS92 163 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 LHFPL4Q7Z7J7 247 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 HIST1H2BHQ93079 126 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 HIST1H2BNQ99877 126 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 HIST1H2BMQ99879 126 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 NABP2Q9BQ15 211 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 DNAJC4Q9NNZ3 241 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 HILPDAQ9Y5L2 63 aa12.26□□□□□ -0.45
NEK9-209ENST00000556170 C15orf62A8K5M9 175 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 TMEM250H0YL14 139 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 SLC17A3O00476 420 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 IGKV1-16P04430 117 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 LINC00869P0C866 280 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 COL5A1-AS1Q5SY13 56 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 FAM90A2PQ658T7 463 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 TREML4Q6UXN2 200 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 PIP4P1Q86T03 277 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 NPIPB3Q92617 1050 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 NEUROG1Q92886 237 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 TIMD4Q96H15 378 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 NCBP2LA6PVI3 153 aaKnown RBP12.25□□□□□ -0.45
NEK9-209ENST00000556170 SPATA31B1PQ5VZV4 182 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 CMTM2Q8TAZ6 248 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 SEBOXQ9HB31 216 aaPredicted RBP12.25□□□□□ -0.45
NEK9-209ENST00000556170 ZNF331Q9NQX6 463 aaPredicted RBP12.25□□□□□ -0.45
NEK9-209ENST00000556170 TMEM106BQ9NUM4 274 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 WDR83OSQ9Y284 106 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 MMP23AO75900 390 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 TMEM183BQ1AE95 376 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 MSMPQ1L6U9 139 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 SAPCD1Q5SSQ6 148 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 ANAPC16Q96DE5 110 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 TIMM9Q9Y5J7 89 aa12.25□□□□□ -0.45
NEK9-209ENST00000556170 IGLV2-14P01704 120 aa12.24□□□□□ -0.45
NEK9-209ENST00000556170 RND2P52198 227 aa12.24□□□□□ -0.45
NEK9-209ENST00000556170 MIR17HGQ75NE6 70 aa12.24□□□□□ -0.45
NEK9-209ENST00000556170 A0A0G2JNJ9 132 aa12.24□□□□□ -0.45
NEK9-209ENST00000556170 EREGO14944 169 aa12.24□□□□□ -0.45
NEK9-209ENST00000556170 CAMPP49913 170 aa12.24□□□□□ -0.45
NEK9-209ENST00000556170 BPIFB3P59826 476 aa12.24□□□□□ -0.45
NEK9-209ENST00000556170 LYPD6BQ8NI32 183 aa12.24□□□□□ -0.45
NEK9-209ENST00000556170 VSTM2AQ8TAG5 236 aa12.24□□□□□ -0.45
NEK9-209ENST00000556170 Q9UFV3 132 aa12.24□□□□□ -0.45
NEK9-209ENST00000556170 SAA1P0DJI8 122 aaPredicted RBP12.24□□□□□ -0.45
NEK9-209ENST00000556170 GCHFRP30047 84 aa12.24□□□□□ -0.45
NEK9-209ENST00000556170 PQLC2Q6ZP29 291 aa12.24□□□□□ -0.45
NEK9-209ENST00000556170 IFI27L2Q9H2X8 130 aa12.24□□□□□ -0.45
NEK9-209ENST00000556170 A0A1B0GWJ7 208 aa12.23□□□□□ -0.45
NEK9-209ENST00000556170 GRIFINA4D1Z8 144 aa12.23□□□□□ -0.45
NEK9-209ENST00000556170 SLC25A5P05141 298 aaKnown RBP12.23□□□□□ -0.45
NEK9-209ENST00000556170 CNN1P51911 297 aaKnown RBP12.23□□□□□ -0.45
NEK9-209ENST00000556170 LEMD1Q68G75 181 aa12.23□□□□□ -0.45
NEK9-209ENST00000556170 OR9G1Q8NH87 305 aa12.23□□□□□ -0.45
NEK9-209ENST00000556170 OR2T6Q8NHC8 308 aa12.23□□□□□ -0.45
NEK9-209ENST00000556170 SEPSECSQ9HD40 501 aaKnown RBP12.23□□□□□ -0.45
NEK9-209ENST00000556170 DPRXA6NFQ7 191 aa12.23□□□□□ -0.45
NEK9-209ENST00000556170 SOD3P08294 240 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 505.2 ms