RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ZNF439Q8NDP4 499 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 OR5B3Q8NH48 314 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 GAFA1Q96PS6 74 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 CCL13Q99616 98 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 LINC00574Q9H8X3 128 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 RPUSD1Q9UJJ7 312 aaKnown RBP5.73□□□□□ -1.49
TDP1-213ENST00000555880 OTOGLQ3ZCN5 2332 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 ICE1Q9Y2F5 2266 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 TRBV9A0A0B4J1U6 114 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 HELTA6NFD8 242 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 A8MWP6 167 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 OR7C2O60412 319 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 PAX1P15863 534 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 NDUFB7P17568 137 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 TNFRSF1AP19438 455 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 ADMP35318 185 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 USF2Q15853 346 aaPredicted RBP5.73□□□□□ -1.49
TDP1-213ENST00000555880 TIGITQ495A1 244 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 IGFL3Q6UXB1 125 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 ZNF600Q6ZNG1 722 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 PQLC2Q6ZP29 291 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 ZNF788Q6ZQV5 615 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 MIR17HGQ75NE6 70 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 Q8N3U1 123 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 FAM216BQ8N7L0 139 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 CMTM2Q8TAZ6 248 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 ZCCHC14Q8WYQ9 949 aaKnown RBP5.73□□□□□ -1.49
TDP1-213ENST00000555880 C1orf159Q96HA4 380 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 EAF1Q96JC9 268 aaPredicted RBP5.73□□□□□ -1.49
TDP1-213ENST00000555880 MS4A10Q96PG2 267 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 NABP2Q9BQ15 211 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 NDUFAF3Q9BU61 184 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 COMMD5Q9GZQ3 224 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 FAM215AQ9Y5M1 114 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 LINC00312Q9Y6C7 94 aa5.73□□□□□ -1.49
TDP1-213ENST00000555880 DYSFO75923 2080 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 CEP250Q9BV73 2442 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 MAP1BP46821 2468 aaKnown RBP5.72□□□□□ -1.49
TDP1-213ENST00000555880 TEX50A0A1B0GTY4 177 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 KLK10O43240 276 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 FOXH1O75593 365 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 LINC00869P0C866 280 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 CT45A6P0DMU7 189 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 CT45A5P0DMU8 189 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 CT45A7P0DMV0 189 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 CRISP2P16562 243 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 TPPP2P59282 170 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 SSTP61278 116 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 PAFAH1B2P68402 229 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 MEF2CQ06413 473 aaPredicted RBP5.72□□□□□ -1.49
TDP1-213ENST00000555880 PRSS8Q16651 343 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 C2orf83Q53S99 150 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 CENPWQ5EE01 88 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 UTF1Q5T230 341 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 TMEM108Q6UXF1 575 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 TCF23Q7RTU1 214 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 ZNF664Q8N3J9 261 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 PNKDQ8N490 385 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 BEND2Q8NDZ0 799 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 OR1L6Q8NGR2 347 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 OR1L8Q8NGR8 309 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 OSR1Q8TAX0 266 aaPredicted RBP5.72□□□□□ -1.49
TDP1-213ENST00000555880 RNF2Q99496 336 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 MRPL18Q9H0U6 180 aaKnown RBP5.72□□□□□ -1.49
TDP1-213ENST00000555880 BET1LQ9NYM9 111 aa5.72□□□□□ -1.49
TDP1-213ENST00000555880 TNCP24821 2201 aa5.71□□□□□ -1.49
TDP1-213ENST00000555880 K7EN84 100 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 SLC17A3O00476 420 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 FCN1O00602 326 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 MT-ND6P03923 174 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 IGKV1-16P04430 117 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 OR4A8P0C604 315 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 SAA1P0DJI8 122 aaPredicted RBP5.71□□□□□ -1.5
TDP1-213ENST00000555880 MYOD1P15172 320 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 CBLN1P23435 193 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 CD40P25942 277 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 OR10J1P30954 320 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 LGALS4P56470 323 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 SELENOTP62341 195 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 RANP62826 216 aaKnown RBP5.71□□□□□ -1.5
TDP1-213ENST00000555880 ERHP84090 104 aaKnown RBP5.71□□□□□ -1.5
TDP1-213ENST00000555880 SSX2Q16385 188 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 HLA-DRB5Q30154 266 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 COX19Q49B96 90 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 TEX36Q5VZQ5 186 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 WDR73Q6P4I2 378 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 DUX4L9Q6RFH8 374 aaPredicted RBP5.71□□□□□ -1.5
TDP1-213ENST00000555880 BAGE3Q86Y29 109 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 BAGE2Q86Y30 109 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 MMD2Q8IY49 270 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 NUP37Q8NFH4 326 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 CACNG8Q8WXS5 425 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 HARBI1Q96MB7 349 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 MRPL32Q9BYC8 188 aaKnown RBP5.71□□□□□ -1.5
TDP1-213ENST00000555880 NAGKQ9UJ70 344 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 ZNF318Q5VUA4 2279 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 A0A1W2PN81 502 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 OR5G3P0C626 314 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 OR10J4P0C629 311 aa5.71□□□□□ -1.5
TDP1-213ENST00000555880 USF1P22415 310 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms