RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PACRGQ96M98 296 aaPredicted RBP0.18□□□□□ -2.38
SRP54-207ENST00000555535 HDHD2Q9H0R4 259 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 CHMP4BQ9H444 224 aaKnown RBP0.18□□□□□ -2.38
SRP54-207ENST00000555535 MAP1LC3AQ9H492 121 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 EFCAB1Q9HAE3 211 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 XAGE1AQ9HD64 81 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 CISHQ9NSE2 258 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 POLR1DQ9Y2S0 133 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 FRAS1Q86XX4 4008 aa0.18□□□□□ -2.38
SRP54-207ENST00000555535 KIAA1549Q9HCM3 1950 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 ASCC3Q8N3C0 2202 aaKnown RBP0.17□□□□□ -2.38
SRP54-207ENST00000555535 TRBV20OR9-2A0A075B6H5 130 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 A0A0J9YY10 115 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 A0A1B0GX78 115 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 PQLC2LA1A4F0 135 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 C2orf70A6NJV1 201 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 IQCF5A8MTL0 148 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 FABP5P3A8MUU1 101 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 HSBP1L1C9JCN9 74 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 GOLGA8KD6RF30 607 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 ACOX3O15254 700 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 OR2T1O43869 369 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 OBSL1O75147 1896 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 CLPSP04118 112 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 IL3P08700 152 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 MGST1P10620 155 aaKnown RBP0.17□□□□□ -2.38
SRP54-207ENST00000555535 ZNF25P17030 456 aaPredicted RBP0.17□□□□□ -2.38
SRP54-207ENST00000555535 NFYAP23511 347 aaPredicted RBP0.17□□□□□ -2.38
SRP54-207ENST00000555535 RPL12P30050 165 aaKnown RBP0.17□□□□□ -2.38
SRP54-207ENST00000555535 FXYD2P54710 66 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 TNFAIP6P98066 277 aaPredicted RBP0.17□□□□□ -2.38
SRP54-207ENST00000555535 GRK1Q15835 563 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 GUK1Q16774 197 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 KHDC3LQ587J8 217 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 TNFAIP8L2Q6P589 184 aaPredicted RBP0.17□□□□□ -2.38
SRP54-207ENST00000555535 ZNF550Q7Z398 422 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 Q8N6K4 173 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 Q8N814 137 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 PATE1Q8WXA2 126 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 C11orf40Q8WZ69 217 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 BORCS5Q969J3 196 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 DRC3Q9H069 523 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 ACER3Q9NUN7 267 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 MYO5AQ9Y4I1 1855 aaKnown RBP0.17□□□□□ -2.38
SRP54-207ENST00000555535 SIP14410 1827 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 USP24Q9UPU5 2620 aa0.17□□□□□ -2.38
SRP54-207ENST00000555535 FSIP2Q5CZC0 6907 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 EVC2Q86UK5 1308 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 ZGRF1Q86YA3 2104 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 A0A1B0GW54 56 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 CCDC160A6NGH7 325 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 NCR3O14931 201 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 SSNA1O43805 119 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 CALUO43852 315 aaPredicted RBP0.16□□□□□ -2.38
SRP54-207ENST00000555535 OR1I1O60431 355 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 HYPMO75409 117 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 PRM2P04554 102 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 OCMP0CE72 109 aaPredicted RBP0.16□□□□□ -2.38
SRP54-207ENST00000555535 DDTP30046 118 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 SSR2P43308 183 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 LPCAT4Q643R3 524 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 GLT8D1Q68CQ7 371 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 TEX261Q6UWH6 196 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 DPPA3Q6W0C5 159 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 IQCF2Q8IXL9 164 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 CLECL1Q8IZS7 167 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 OR4E2Q8NGC2 313 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 MCFD2Q8NI22 146 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 IMP4Q96G21 291 aaKnown RBP0.16□□□□□ -2.38
SRP54-207ENST00000555535 CNBD2Q96M20 576 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 AMELYQ99218 206 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 ULBP3Q9BZM4 244 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 WDR61Q9GZS3 305 aaKnown RBP0.16□□□□□ -2.38
SRP54-207ENST00000555535 OR52A5Q9H2C5 316 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 OR51I2Q9H344 312 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 CDC42SE1Q9NRR8 79 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 PLEKHJ1Q9NW61 149 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 CMTM6Q9NX76 183 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 CKLFQ9UBR5 152 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 TP73-AS1Q9UF72 201 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 AK3Q9UIJ7 227 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 U3KQ87 197 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 SBF1O95248 1867 aa0.16□□□□□ -2.38
SRP54-207ENST00000555535 UNC13CQ8NB66 2214 aa0.15□□□□□ -2.38
SRP54-207ENST00000555535 TOPBP1Q92547 1522 aa0.15□□□□□ -2.39
SRP54-207ENST00000555535 TMEM213A2RRL7 107 aa0.15□□□□□ -2.39
SRP54-207ENST00000555535 DISC1C4P0D8 188 aa0.15□□□□□ -2.39
SRP54-207ENST00000555535 INMT-MINDY4F8WBC2 141 aa0.15□□□□□ -2.39
SRP54-207ENST00000555535 C19orf84I3L1E1 186 aa0.15□□□□□ -2.39
SRP54-207ENST00000555535 M0QZ92 97 aa0.15□□□□□ -2.39
SRP54-207ENST00000555535 SULT1B1O43704 296 aa0.15□□□□□ -2.39
SRP54-207ENST00000555535 TNNC2P02585 160 aa0.15□□□□□ -2.39
SRP54-207ENST00000555535 CTSDP07339 412 aaPredicted RBP0.15□□□□□ -2.39
SRP54-207ENST00000555535 HTR1AP08908 422 aa0.15□□□□□ -2.39
SRP54-207ENST00000555535 COX5BP10606 129 aa0.15□□□□□ -2.39
SRP54-207ENST00000555535 FGF6P10767 208 aa0.15□□□□□ -2.39
SRP54-207ENST00000555535 PSMB6P28072 239 aa0.15□□□□□ -2.39
SRP54-207ENST00000555535 ZNF80P51504 273 aaPredicted RBP0.15□□□□□ -2.39
SRP54-207ENST00000555535 TCL1AP56279 114 aa0.15□□□□□ -2.39
SRP54-207ENST00000555535 POLR2GP62487 172 aaKnown RBP eCLIP0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms