RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 PLXNB1O43157 2135 aa19.65■□□□□ 0.74
TMEM260-207ENST00000555497 C11orf94C9JXX5 98 aa19.64■□□□□ 0.74
TMEM260-207ENST00000555497 TMEM241Q24JQ0 296 aa19.64■□□□□ 0.74
TMEM260-207ENST00000555497 HRNRQ86YZ3 2850 aaPredicted RBP19.64■□□□□ 0.73
TMEM260-207ENST00000555497 IGKV1OR2-108A0A075B7D4 117 aa19.64■□□□□ 0.73
TMEM260-207ENST00000555497 STAG3L2P0CL84 134 aa19.64■□□□□ 0.73
TMEM260-207ENST00000555497 STAG3L3P0CL85 134 aa19.64■□□□□ 0.73
TMEM260-207ENST00000555497 ATP5G3P48201 142 aa19.64■□□□□ 0.73
TMEM260-207ENST00000555497 C10orf55Q5SWW7 151 aa19.64■□□□□ 0.73
TMEM260-207ENST00000555497 NEIL1Q96FI4 390 aaPredicted RBP19.64■□□□□ 0.73
TMEM260-207ENST00000555497 COMMD5Q9GZQ3 224 aa19.64■□□□□ 0.73
TMEM260-207ENST00000555497 SEPSECSQ9HD40 501 aaKnown RBP19.64■□□□□ 0.73
TMEM260-207ENST00000555497 FNDC10F2Z333 226 aa19.63■□□□□ 0.73
TMEM260-207ENST00000555497 LINC00869P0C866 280 aa19.63■□□□□ 0.73
TMEM260-207ENST00000555497 RPL29P47914 159 aaKnown RBP19.63■□□□□ 0.73
TMEM260-207ENST00000555497 PRR20EP86478 221 aa19.63■□□□□ 0.73
TMEM260-207ENST00000555497 PRR20CP86479 221 aa19.63■□□□□ 0.73
TMEM260-207ENST00000555497 PRR20DP86480 221 aa19.63■□□□□ 0.73
TMEM260-207ENST00000555497 PRR20BP86481 221 aa19.63■□□□□ 0.73
TMEM260-207ENST00000555497 PRR20AP86496 221 aa19.63■□□□□ 0.73
TMEM260-207ENST00000555497 FAM209BQ5JX69 171 aa19.63■□□□□ 0.73
TMEM260-207ENST00000555497 IGHV3-72A0A0B4J1Y9 119 aa19.63■□□□□ 0.73
TMEM260-207ENST00000555497 USF1P22415 310 aaPredicted RBP19.63■□□□□ 0.73
TMEM260-207ENST00000555497 RPS10P46783 165 aaKnown RBP19.63■□□□□ 0.73
TMEM260-207ENST00000555497 RPL23P62829 140 aaKnown RBP19.63■□□□□ 0.73
TMEM260-207ENST00000555497 LY6DQ14210 128 aa19.63■□□□□ 0.73
TMEM260-207ENST00000555497 ADIRFQ15847 76 aa19.63■□□□□ 0.73
TMEM260-207ENST00000555497 SPNS3Q6ZMD2 512 aa19.63■□□□□ 0.73
TMEM260-207ENST00000555497 OR51G1Q8NGK1 321 aa19.63■□□□□ 0.73
TMEM260-207ENST00000555497 OR1L8Q8NGR8 309 aa19.63■□□□□ 0.73
TMEM260-207ENST00000555497 TPSG1Q9NRR2 321 aa19.63■□□□□ 0.73
TMEM260-207ENST00000555497 S100PP25815 95 aa19.62■□□□□ 0.73
TMEM260-207ENST00000555497 PPOXP50336 477 aa19.62■□□□□ 0.73
TMEM260-207ENST00000555497 GAMTQ14353 236 aa19.62■□□□□ 0.73
TMEM260-207ENST00000555497 LINC00469Q8N7U9 141 aa19.62■□□□□ 0.73
TMEM260-207ENST00000555497 ZNF430Q9H8G1 570 aaPredicted RBP19.62■□□□□ 0.73
TMEM260-207ENST00000555497 TMEM242Q9NWH2 141 aa19.62■□□□□ 0.73
TMEM260-207ENST00000555497 TRAV20A0A0B4J274 112 aa19.61■□□□□ 0.73
TMEM260-207ENST00000555497 NDUFS6O75380 124 aaKnown RBP19.61■□□□□ 0.73
TMEM260-207ENST00000555497 RND2P52198 227 aa19.61■□□□□ 0.73
TMEM260-207ENST00000555497 MRGPRG-AS1Q2M3A8 158 aa19.61■□□□□ 0.73
TMEM260-207ENST00000555497 PCGF1Q9BSM1 259 aa19.61■□□□□ 0.73
TMEM260-207ENST00000555497 SLC45A2Q9UMX9 530 aa19.61■□□□□ 0.73
TMEM260-207ENST00000555497 NAV3Q8IVL0 2385 aa19.61■□□□□ 0.73
TMEM260-207ENST00000555497 IGHV2-26A0A0B4J1V2 119 aa19.61■□□□□ 0.73
TMEM260-207ENST00000555497 CST9LP1Q5W188 147 aa19.61■□□□□ 0.73
TMEM260-207ENST00000555497 TMEM144Q7Z5S9 345 aa19.61■□□□□ 0.73
TMEM260-207ENST00000555497 C1QL4Q86Z23 238 aa19.61■□□□□ 0.73
TMEM260-207ENST00000555497 KCNIP2Q9NS61 270 aa19.61■□□□□ 0.73
TMEM260-207ENST00000555497 MIOXQ9UGB7 285 aa19.61■□□□□ 0.73
TMEM260-207ENST00000555497 CLDN34H7C241 214 aa19.6■□□□□ 0.73
TMEM260-207ENST00000555497 RAB31Q13636 194 aa19.6■□□□□ 0.73
TMEM260-207ENST00000555497 KIAA0141Q14154 515 aaPredicted RBP19.6■□□□□ 0.73
TMEM260-207ENST00000555497 AP4M1O00189 453 aa19.6■□□□□ 0.73
TMEM260-207ENST00000555497 SLC25A17O43808 307 aa19.6■□□□□ 0.73
TMEM260-207ENST00000555497 FOXH1O75593 365 aa19.6■□□□□ 0.73
TMEM260-207ENST00000555497 FSTL3O95633 263 aa19.6■□□□□ 0.73
TMEM260-207ENST00000555497 IGLV1-47P01700 117 aa19.6■□□□□ 0.73
TMEM260-207ENST00000555497 GNB1P62873 340 aa19.6■□□□□ 0.73
TMEM260-207ENST00000555497 WT1-ASQ06250 92 aa19.6■□□□□ 0.73
TMEM260-207ENST00000555497 OR4A5Q8NH83 315 aa19.6■□□□□ 0.73
TMEM260-207ENST00000555497 CLN5O75503 358 aa19.59■□□□□ 0.73
TMEM260-207ENST00000555497 CXorf1O96002 111 aa19.59■□□□□ 0.73
TMEM260-207ENST00000555497 ATP5IP56385 69 aaPredicted RBP19.59■□□□□ 0.73
TMEM260-207ENST00000555497 ENSAO43768 121 aaKnown RBP19.59■□□□□ 0.73
TMEM260-207ENST00000555497 GATA2P23769 480 aaPredicted RBP19.59■□□□□ 0.73
TMEM260-207ENST00000555497 VSTM2AQ8TAG5 236 aa19.59■□□□□ 0.73
TMEM260-207ENST00000555497 ARHGAP32A7KAX9 2087 aa19.58■□□□□ 0.73
TMEM260-207ENST00000555497 TACC2O95359 2948 aa19.58■□□□□ 0.73
TMEM260-207ENST00000555497 PPIAL4CA0A0B4J2A2 164 aa19.58■□□□□ 0.73
TMEM260-207ENST00000555497 PPIAL4GP0DN37 164 aa19.58■□□□□ 0.73
TMEM260-207ENST00000555497 MC5RP33032 325 aa19.58■□□□□ 0.73
TMEM260-207ENST00000555497 CD69Q07108 199 aa19.58■□□□□ 0.73
TMEM260-207ENST00000555497 HLA-DRB5Q30154 266 aa19.58■□□□□ 0.73
TMEM260-207ENST00000555497 INS-IGF2F8WCM5 200 aa19.57■□□□□ 0.72
TMEM260-207ENST00000555497 OR10J1P30954 320 aa19.57■□□□□ 0.72
TMEM260-207ENST00000555497 RHOBP62745 196 aa19.57■□□□□ 0.72
TMEM260-207ENST00000555497 ERHP84090 104 aaKnown RBP19.57■□□□□ 0.72
TMEM260-207ENST00000555497 C16orf82Q7Z2V1 217 aa19.57■□□□□ 0.72
TMEM260-207ENST00000555497 DERL1Q9BUN8 251 aa19.57■□□□□ 0.72
TMEM260-207ENST00000555497 HIVEP3Q5T1R4 2406 aa19.57■□□□□ 0.72
TMEM260-207ENST00000555497 SOD3P08294 240 aa19.57■□□□□ 0.72
TMEM260-207ENST00000555497 GCHFRP30047 84 aa19.57■□□□□ 0.72
TMEM260-207ENST00000555497 SPTBN1Q01082 2364 aaKnown RBP19.57■□□□□ 0.72
TMEM260-207ENST00000555497 ACTL6BO94805 426 aa19.56■□□□□ 0.72
TMEM260-207ENST00000555497 IL3RAP26951 378 aa19.56■□□□□ 0.72
TMEM260-207ENST00000555497 CNTFRP26992 372 aa19.56■□□□□ 0.72
TMEM260-207ENST00000555497 C11orf71Q6IPW1 123 aa19.56■□□□□ 0.72
TMEM260-207ENST00000555497 MIR17HGQ75NE6 70 aa19.56■□□□□ 0.72
TMEM260-207ENST00000555497 OR2T6Q8NHC8 308 aa19.56■□□□□ 0.72
TMEM260-207ENST00000555497 CTDSP1Q9GZU7 261 aa19.56■□□□□ 0.72
TMEM260-207ENST00000555497 YTHDF2Q9Y5A9 579 aaKnown RBP19.56■□□□□ 0.72
TMEM260-207ENST00000555497 PDE6DO43924 150 aa19.56■□□□□ 0.72
TMEM260-207ENST00000555497 NDUFB4O95168 129 aa19.56■□□□□ 0.72
TMEM260-207ENST00000555497 TNFRSF14Q92956 283 aa19.56■□□□□ 0.72
TMEM260-207ENST00000555497 BUB1B-PAK6H3BSN5 160 aa19.55■□□□□ 0.72
TMEM260-207ENST00000555497 DLL1O00548 723 aa19.55■□□□□ 0.72
TMEM260-207ENST00000555497 COX7A1P24310 79 aa19.55■□□□□ 0.72
TMEM260-207ENST00000555497 VMA21Q3ZAQ7 101 aa19.55■□□□□ 0.72
TMEM260-207ENST00000555497 C8orf46Q8TAG6 207 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms