RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 SRSF4Q08170 494 aaKnown RBP11.14□□□□□ -0.63
CHD8-208ENST00000555301 KHDC1LQ5JSQ8 128 aa11.14□□□□□ -0.63
CHD8-208ENST00000555301 GSG1LQ6UXU4 331 aa11.14□□□□□ -0.63
CHD8-208ENST00000555301 NDUFA11Q86Y39 141 aa11.14□□□□□ -0.63
CHD8-208ENST00000555301 ZBTB8BQ8NAP8 495 aaPredicted RBP11.14□□□□□ -0.63
CHD8-208ENST00000555301 MYOZ3Q8TDC0 251 aa11.14□□□□□ -0.63
CHD8-208ENST00000555301 OR10C1Q96KK4 312 aa11.14□□□□□ -0.63
CHD8-208ENST00000555301 MS4A10Q96PG2 267 aa11.14□□□□□ -0.63
CHD8-208ENST00000555301 KLK15Q9H2R5 256 aa11.14□□□□□ -0.63
CHD8-208ENST00000555301 HIPK2Q9H2X6 1198 aa11.14□□□□□ -0.63
CHD8-208ENST00000555301 THYN1Q9P016 225 aa11.14□□□□□ -0.63
CHD8-208ENST00000555301 F11RQ9Y624 299 aaKnown RBP11.14□□□□□ -0.63
CHD8-208ENST00000555301 TRBV9A0A0B4J1U6 114 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 A0A0G2JLM5 398 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 FAM223BA6NKX1 122 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 NXPH3O95157 252 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 LY86O95711 162 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 NKX2-1P43699 371 aaPredicted RBP11.13□□□□□ -0.63
CHD8-208ENST00000555301 CDX1P47902 265 aaPredicted RBP11.13□□□□□ -0.63
CHD8-208ENST00000555301 SUB1P53999 127 aaKnown RBP eCLIP11.13□□□□□ -0.63
CHD8-208ENST00000555301 RPL23AP62750 156 aaKnown RBP11.13□□□□□ -0.63
CHD8-208ENST00000555301 ID3Q02535 119 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 KLK9Q2XQG4 91 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 LCNL1Q6ZST4 164 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 FAM223AQ8IWN6 122 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 ZNF114Q8NC26 417 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 NECAP1Q8NC96 275 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 OR4D5Q8NGN0 318 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 OR1P1Q8NH06 330 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 DTD1Q8TEA8 209 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 USMG5Q96IX5 58 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 UBE2E2Q96LR5 201 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 C2orf50Q96LR7 162 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 RBKSQ9H477 322 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 HEYLQ9NQ87 328 aaPredicted RBP11.13□□□□□ -0.63
CHD8-208ENST00000555301 GSKIPQ9P0R6 139 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 KLK9Q9UKQ9 250 aa11.13□□□□□ -0.63
CHD8-208ENST00000555301 IGLV11-55A0A075B6I3 123 aa11.12□□□□□ -0.63
CHD8-208ENST00000555301 GOSR2O14653 212 aa11.12□□□□□ -0.63
CHD8-208ENST00000555301 PRH1P02810 166 aa11.12□□□□□ -0.63
CHD8-208ENST00000555301 HTR2BP41595 481 aa11.12□□□□□ -0.63
CHD8-208ENST00000555301 RHOGP84095 191 aa11.12□□□□□ -0.63
CHD8-208ENST00000555301 ZNF491Q8N8L2 437 aa11.12□□□□□ -0.63
CHD8-208ENST00000555301 FANCD2OSQ96PS1 177 aa11.12□□□□□ -0.63
CHD8-208ENST00000555301 CIB3Q96Q77 187 aaPredicted RBP11.12□□□□□ -0.63
CHD8-208ENST00000555301 P2RX4Q99571 388 aa11.12□□□□□ -0.63
CHD8-208ENST00000555301 WRBO00258 174 aa11.11□□□□□ -0.63
CHD8-208ENST00000555301 SYNGR2O43760 224 aa11.11□□□□□ -0.63
CHD8-208ENST00000555301 ATP5IP56385 69 aaPredicted RBP11.11□□□□□ -0.63
CHD8-208ENST00000555301 KIAA0141Q14154 515 aaPredicted RBP11.11□□□□□ -0.63
CHD8-208ENST00000555301 C2orf68Q2NKX9 166 aa11.11□□□□□ -0.63
CHD8-208ENST00000555301 SLC25A24Q6NUK1 477 aa11.11□□□□□ -0.63
CHD8-208ENST00000555301 C19orf35Q6ZS72 473 aa11.11□□□□□ -0.63
CHD8-208ENST00000555301 NOXA1Q86UR1 476 aa11.11□□□□□ -0.63
CHD8-208ENST00000555301 FBXL7Q9UJT9 491 aa11.11□□□□□ -0.63
CHD8-208ENST00000555301 U3KQ87 197 aa11.11□□□□□ -0.63
CHD8-208ENST00000555301 COL6A5A8TX70 2615 aa11.1□□□□□ -0.63
CHD8-208ENST00000555301 NUDT19A8MXV4 375 aa11.1□□□□□ -0.63
CHD8-208ENST00000555301 CORTO00230 105 aa11.1□□□□□ -0.63
CHD8-208ENST00000555301 OR2J3O76001 311 aa11.1□□□□□ -0.63
CHD8-208ENST00000555301 SCGB1D2O95969 90 aa11.1□□□□□ -0.63
CHD8-208ENST00000555301 CYCSP99999 105 aaKnown RBP11.1□□□□□ -0.63
CHD8-208ENST00000555301 ATP5G2Q06055 141 aa11.1□□□□□ -0.63
CHD8-208ENST00000555301 BSXQ3C1V8 233 aa11.1□□□□□ -0.63
CHD8-208ENST00000555301 NSUN5P1Q3KNT7 163 aa11.1□□□□□ -0.63
CHD8-208ENST00000555301 SLC24A4Q8NFF2 622 aa11.1□□□□□ -0.63
CHD8-208ENST00000555301 C4orf3Q8WVX3 66 aa11.1□□□□□ -0.63
CHD8-208ENST00000555301 MAGT1Q9H0U3 335 aa11.1□□□□□ -0.63
CHD8-208ENST00000555301 MED28Q9H204 178 aa11.1□□□□□ -0.63
CHD8-208ENST00000555301 MGAT4CQ9UBM8 478 aa11.1□□□□□ -0.63
CHD8-208ENST00000555301 A0A1W2PRX2 142 aa11.09□□□□□ -0.63
CHD8-208ENST00000555301 IFNA10P01566 189 aa11.09□□□□□ -0.63
CHD8-208ENST00000555301 RNASE2P10153 161 aaKnown RBP11.09□□□□□ -0.63
CHD8-208ENST00000555301 POLR2GP62487 172 aaKnown RBP eCLIP11.09□□□□□ -0.63
CHD8-208ENST00000555301 RPP30P78346 268 aaKnown RBP11.09□□□□□ -0.63
CHD8-208ENST00000555301 C15orf32Q32M92 178 aa11.09□□□□□ -0.63
CHD8-208ENST00000555301 C2orf83Q53S99 150 aa11.09□□□□□ -0.63
CHD8-208ENST00000555301 FAM209BQ5JX69 171 aa11.09□□□□□ -0.63
CHD8-208ENST00000555301 HIST2H2BDQ6DRA6 164 aa11.09□□□□□ -0.63
CHD8-208ENST00000555301 KLHL30-AS1Q8NEE0 82 aa11.09□□□□□ -0.63
CHD8-208ENST00000555301 CXorf58Q96LI9 332 aa11.09□□□□□ -0.63
CHD8-208ENST00000555301 NMES1Q9C002 83 aa11.09□□□□□ -0.63
CHD8-208ENST00000555301 DMRT1Q9Y5R6 373 aa11.09□□□□□ -0.63
CHD8-208ENST00000555301 TNCP24821 2201 aa11.09□□□□□ -0.63
CHD8-208ENST00000555301 ADARB2-AS1A8MUL3 147 aa11.08□□□□□ -0.64
CHD8-208ENST00000555301 M0QZ24 198 aa11.08□□□□□ -0.64
CHD8-208ENST00000555301 NDUFB8O95169 186 aa11.08□□□□□ -0.64
CHD8-208ENST00000555301 SIX6O95475 246 aa11.08□□□□□ -0.64
CHD8-208ENST00000555301 MBPP02686 304 aaPredicted RBP11.08□□□□□ -0.64
CHD8-208ENST00000555301 LGALS1P09382 135 aaKnown RBP11.08□□□□□ -0.64
CHD8-208ENST00000555301 IAPPP10997 89 aa11.08□□□□□ -0.64
CHD8-208ENST00000555301 NPY1RP25929 384 aa11.08□□□□□ -0.64
CHD8-208ENST00000555301 MFAP2P55001 183 aa11.08□□□□□ -0.64
CHD8-208ENST00000555301 RUNX1Q01196 453 aa11.08□□□□□ -0.64
CHD8-208ENST00000555301 IL15RAQ13261 267 aa11.08□□□□□ -0.64
CHD8-208ENST00000555301 EXOSC2Q13868 293 aaKnown RBP11.08□□□□□ -0.64
CHD8-208ENST00000555301 PVRIGQ6DKI7 326 aa11.08□□□□□ -0.64
CHD8-208ENST00000555301 OR4F17Q8NGA8 305 aa11.08□□□□□ -0.64
CHD8-208ENST00000555301 EEF1AKMT3Q96AZ1 226 aa11.08□□□□□ -0.64
CHD8-208ENST00000555301 OR4F4Q96R69 305 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms