RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 TRIM16LQ309B1 348 aa9.45□□□□□ -0.9
TRAPPC6B-205ENST00000555269 ADAMTSL5Q6ZMM2 481 aa9.45□□□□□ -0.9
TRAPPC6B-205ENST00000555269 Q8N402 240 aa9.45□□□□□ -0.9
TRAPPC6B-205ENST00000555269 GDPD1Q8N9F7 314 aa9.45□□□□□ -0.9
TRAPPC6B-205ENST00000555269 CCDC71LQ8N9Z2 235 aa9.45□□□□□ -0.9
TRAPPC6B-205ENST00000555269 OR5B3Q8NH48 314 aa9.45□□□□□ -0.9
TRAPPC6B-205ENST00000555269 GLYATL2Q8WU03 294 aa9.45□□□□□ -0.9
TRAPPC6B-205ENST00000555269 EEF1AKMT3Q96AZ1 226 aa9.45□□□□□ -0.9
TRAPPC6B-205ENST00000555269 TSC22D3Q99576 134 aa9.45□□□□□ -0.9
TRAPPC6B-205ENST00000555269 PRRT1Q99946 306 aa9.45□□□□□ -0.9
TRAPPC6B-205ENST00000555269 C14orf166Q9Y224 244 aaKnown RBP9.45□□□□□ -0.9
TRAPPC6B-205ENST00000555269 SELENOKQ9Y6D0 94 aa9.45□□□□□ -0.9
TRAPPC6B-205ENST00000555269 DNAH9Q9NYC9 4486 aa9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 SORL1Q92673 2214 aa9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 IGHV3-35A0A0C4DH35 117 aa9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 GGCTO75223 188 aaKnown RBP9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 P0C879 139 aa9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 GP9P14770 177 aa9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 UCP1P25874 307 aa9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 ARL3P36405 182 aa9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 KLF9Q13886 244 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 Q6ZRM9 215 aa9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 HSD17B13Q7Z5P4 300 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 OR6Q1Q8NGQ2 317 aa9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 LHFPL5Q8TAF8 219 aa9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 ZNF502Q8TBZ5 544 aa9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 LSM10Q969L4 123 aaKnown RBP9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 TMEM56Q96MV1 263 aa9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 TMEM222Q9H0R3 208 aa9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 PRR13Q9NZ81 148 aa9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 F11RQ9Y624 299 aaKnown RBP9.44□□□□□ -0.9
TRAPPC6B-205ENST00000555269 TRBV7-1A0A0A6YYK4 115 aa9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 ZNF320A2RRD8 509 aa9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 IZUMO1RA6ND01 250 aa9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 CRYM-AS1A6NIL9 109 aa9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 CDS2O95674 445 aa9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 GPR183P32249 361 aa9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 ETV6P41212 452 aa9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 SURF2Q15527 256 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 THOC7Q6I9Y2 204 aaKnown RBP9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 GPHB5Q86YW7 130 aa9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 SELENOHQ8IZQ5 122 aaKnown RBP9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 OR2C3Q8N628 320 aa9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 TRIM63Q969Q1 353 aa9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 TMEM230Q96A57 120 aa9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 CXorf58Q96LI9 332 aa9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 ASCL2Q99929 193 aa9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 NAA60Q9H7X0 242 aa9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 SCP2D1Q9UJQ7 156 aa9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 COL7A1Q02388 2944 aa9.43□□□□□ -0.9
TRAPPC6B-205ENST00000555269 ST8SIA3O43173 380 aa9.42□□□□□ -0.9
TRAPPC6B-205ENST00000555269 IGHV3-48P01763 117 aa9.42□□□□□ -0.9
TRAPPC6B-205ENST00000555269 AKR1C4P17516 323 aa9.42□□□□□ -0.9
TRAPPC6B-205ENST00000555269 AKR1C2P52895 323 aa9.42□□□□□ -0.9
TRAPPC6B-205ENST00000555269 PRCDQ00LT1 54 aa9.42□□□□□ -0.9
TRAPPC6B-205ENST00000555269 CD69Q07108 199 aa9.42□□□□□ -0.9
TRAPPC6B-205ENST00000555269 TOMM5Q8N4H5 51 aa9.42□□□□□ -0.9
TRAPPC6B-205ENST00000555269 VN1R17PQ8TDU5 208 aa9.42□□□□□ -0.9
TRAPPC6B-205ENST00000555269 SCARB1Q8WTV0 552 aa9.42□□□□□ -0.9
TRAPPC6B-205ENST00000555269 GPR146Q96CH1 333 aa9.42□□□□□ -0.9
TRAPPC6B-205ENST00000555269 SLC2A8Q9NY64 477 aa9.42□□□□□ -0.9
TRAPPC6B-205ENST00000555269 THYN1Q9P016 225 aa9.42□□□□□ -0.9
TRAPPC6B-205ENST00000555269 OR2T8A6NH00 312 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 C2orf70A6NJV1 201 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 K7EIM0 57 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 IFNA17P01571 189 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 FOLR2P14207 255 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 DHODHQ02127 395 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 TMEM187Q14656 261 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 BAK1Q16611 211 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 FAM106AQ4KMX7 169 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 TM4SF20Q53R12 229 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 FAM209BQ5JX69 171 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 TMEM268Q5VZI3 342 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 C11orf87Q6NUJ2 197 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 PLET1Q6UQ28 207 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 UNQ9165/PRO28630Q6UXU0 137 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 SGPP2Q8IWX5 399 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 Q8N1Y9 231 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 OR1P1Q8NH06 330 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 CACNG8Q8WXS5 425 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 RRNAD1Q96FB5 475 aaKnown RBP9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 MISP3Q96FF7 219 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 B9D2Q9BPU9 175 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 SRRQ9GZT4 340 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 SIGLEC8Q9NYZ4 499 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 PEMTQ9UBM1 199 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 SMAD5-AS1Q9Y6J3 95 aa9.41□□□□□ -0.9
TRAPPC6B-205ENST00000555269 F8W735 103 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC6B-205ENST00000555269 LGALS9O00182 355 aa9.4□□□□□ -0.9
TRAPPC6B-205ENST00000555269 B3GALNT1O75752 331 aa9.4□□□□□ -0.9
TRAPPC6B-205ENST00000555269 ATG12O94817 140 aa9.4□□□□□ -0.9
TRAPPC6B-205ENST00000555269 SUPT4H1P63272 117 aaKnown RBP9.4□□□□□ -0.9
TRAPPC6B-205ENST00000555269 ERHP84090 104 aaKnown RBP9.4□□□□□ -0.9
TRAPPC6B-205ENST00000555269 DEFB114Q30KQ6 69 aa9.4□□□□□ -0.9
TRAPPC6B-205ENST00000555269 CD300EQ496F6 205 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC6B-205ENST00000555269 SPANXN2Q5MJ10 180 aa9.4□□□□□ -0.9
TRAPPC6B-205ENST00000555269 RNASE11Q8TAA1 199 aaKnown RBP9.4□□□□□ -0.9
TRAPPC6B-205ENST00000555269 RBPMSQ93062 196 aaKnown RBP9.4□□□□□ -0.9
TRAPPC6B-205ENST00000555269 SCGB3A2Q96PL1 93 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms